FFCP PHASE1:Hg19::chr18:56816249..56816258,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:56816249..56816258,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr18:56816249..56816258,+ | |||
|id=chr18:56816249..56816258,+ | |||
|ontology_enrichment_celltype=CL:0000167!9.99e-30!1;CL:0000164!9.99e-30!1;CL:0000502!9.99e-30!1;CL:0000172!9.99e-30!1;CL:0000173!9.99e-30!1;CL:0002351!9.99e-30!1;CL:0000313!4.20e-29!1;CL:0000159!2.74e-15!2 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.55e-98;1!CL:0000164;2.55e-98;1!CL:0000502;2.55e-98;1!CL:0000172;2.55e-98;1!CL:0000173;2.55e-98;1!CL:0000150;2.45e-12;9!CL:0000163;2.45e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.55e-98,1;CL:0000164,2.55e-98,1;CL:0000502,2.55e-98,1;CL:0000172,2.55e-98,1;CL:0000173,2.55e-98,1;CL:0002351,2.55e-98,1;CL:0000150,2.45e-12,9;CL:0000163,2.45e-12,9 | |||
|ontology_enrichment_development_v019=CL:0002351;2.55e-98;1 | |||
|ontology_enrichment_disease=DOID:4430!9.99e-30!1;DOID:2152!4.20e-29!1;DOID:5409!2.26e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.55e-98;1!DOID:169;9.07e-18;6!DOID:171;3.02e-11;10!DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.55e-98,1;DOID:169,9.07e-18,6;DOID:171,3.02e-11,10;DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001831!1.33e-29!1;UBERON:0001567!1.33e-29!1;UBERON:0008801!1.33e-29!1;UBERON:0000029!1.78e-29!1;UBERON:0004911!4.20e-29!1;UBERON:0001829!1.54e-15!2;UBERON:0004089!1.54e-15!2;UBERON:0004909!2.74e-15!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,13.1688842981226,0,4.94920748913415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:56816249..56816258,+ | |||
}} |
Latest revision as of 01:39, 26 July 2015
Short description: | p@chr18:56816249..56816258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:56816249..56816258, + |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.55e-98 | 1 |
enteroendocrine cell | 2.55e-98 | 1 |
type D enteroendocrine cell | 2.55e-98 | 1 |
somatostatin secreting cell | 2.55e-98 | 1 |
pancreatic D cell | 2.55e-98 | 1 |
progenitor cell of endocrine pancreas | 2.55e-98 | 1 |
glandular epithelial cell | 2.45e-12 | 9 |
endocrine cell | 2.45e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.55e-98 | 1 |
neuroendocrine tumor | 9.07e-18 | 6 |
neuroectodermal tumor | 3.02e-11 | 10 |
gastrointestinal system cancer | 1.86e-08 | 14 |