FFCP PHASE1:Hg19::chr18:51690935..51690957,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8932 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6917 | |||
|TSSclassifier=strong | |||
|UniProt=Q69YZ5 | |||
|association_with_transcript=39bp_to_AL110266_5end | |||
|cluster_id=chr18:51690935..51690957,- | |||
|description=CAGE_peak_8_at_MBD2_5end | |||
|id=chr18:51690935..51690957,- | |||
|ontology_enrichment_celltype=CL:0002057!4.47e-16!42;CL:0000860!4.00e-15!45;CL:0002194!1.01e-13!63;CL:0000576!1.01e-13!63;CL:0000040!1.01e-13!63;CL:0000559!1.01e-13!63;CL:0002009!1.23e-12!65;CL:0002087!2.19e-11!119;CL:0000766!4.45e-11!76;CL:0000839!7.20e-11!70;CL:0000557!5.01e-10!71;CL:0000063!1.02e-09!578;CL:0000134!1.76e-09!358;CL:0002320!1.98e-09!365;CL:0000738!1.46e-08!140;CL:0002031!2.02e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-22;33!CL:0002057;2.07e-22;33!CL:0000473;4.84e-21;39!CL:0000234;4.84e-21;39!CL:0000576;5.28e-14;48!CL:0000766;1.60e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.25e-30,48;CL:0000234,8.25e-30,48;CL:0000860,4.63e-28,42;CL:0002057,4.63e-28,42;CL:0002194,9.92e-22,59;CL:0000576,9.92e-22,59;CL:0000040,9.92e-22,59;CL:0000559,9.92e-22,59;CL:0002009,1.56e-20,61;CL:0000766,1.25e-18,72;CL:0002087,1.56e-18,115;CL:0000839,7.08e-18,66;CL:0000557,2.14e-17,67;CL:0002031,3.03e-15,120;CL:0000738,4.98e-15,136;CL:0000134,6.71e-14,354;CL:0002320,1.64e-13,361;CL:0002032,1.81e-11,161;CL:0000837,1.81e-11,161;CL:0000037,1.07e-10,168;CL:0000988,1.14e-10,177;CL:0000763,3.70e-10,108;CL:0000049,3.70e-10,108;CL:0000219,8.99e-10,386;CL:0000723,3.76e-09,433;CL:0000048,5.63e-09,427;CL:0000034,2.18e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.18e-10!80;UBERON:0002384!3.15e-09!375;UBERON:0001474!1.56e-08!86;UBERON:0004765!3.67e-08!101;UBERON:0001434!3.67e-08!101;UBERON:0002390!6.69e-08!102;UBERON:0003061!6.69e-08!102;UBERON:0002193!5.84e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.23e-18,76;UBERON:0001474,1.20e-16,82;UBERON:0004765,1.53e-15,90;UBERON:0002405,1.45e-14,93;UBERON:0002390,1.93e-14,98;UBERON:0003061,1.93e-14,98;UBERON:0001434,2.62e-13,100;UBERON:0002384,5.47e-13,371;UBERON:0002193,2.43e-12,108;UBERON:0003081,3.96e-07,203 | |||
|phase1_expression=1.63510541343501,2.5692062866918,0.281908808191942,1.0007329835313,1.34088328328186,1.74467704820074,0,0.631719873426831,0,1.47440361900905,0,0.436882744260345,0.263766978228454,0.495065411840187,0.331397375727916,1.34465029290355,0,0,0.975865597581014,0.123121058076788,0.204000691244253,0.626909442956176,0.286235987131057,0.958120975510189,0.251085279189606,1.22261449196722,1.23150884174919,1.33808328233255,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0.739508020333575,1.23947520928483,1.42169232487422,0,0,2.4065333696417,1.08505435357926,0.223915474239924,0.32389366601898,0.257575567634187,2.61716829803216,1.13362783106643,1.69808842831471,3.0215774797739,2.05583944010913,1.54853185447552,3.16461631554365,1.7931249457037,1.18241114944293,1.72372840368309,3.22742341791913,2.70852973188684,4.32957380947991,3.0019676506363,1.79778787556068,3.97909060082173,0.320929027076094,1.27867425159808,3.62836430205388,1.99463657621632,2.13112375266347,5.80418477257168,1.70215567407342,2.4912889959823,4.01997864410789,2.08593167368081,2.38907729175628,1.81619850790011,0,2.53169909952708,3.80259515361495,2.12604299965044,0.209658645508376,1.79725809834392,1.20141514273205,1.6072558669708,0.285012743741249,1.9891667719909,1.64397738388171,0,0,0,0,0.800791974072025,0,0,0,2.27685187643779,1.17447437874188,3.44045905312706,0,0,0,0.196709770113833,0.786021525498329,1.23360899399706,0.334372990781356,0,0.946895611469467,0,0.891283655081389,0.589211814949674,1.55073726208535,1.35401931882508,1.92136979588513,0.910415432919148,0.822189523018381,1.10540007114339,0.289803085735052,1.03800594213442,0.267540828089713,2.09071047609954,0.453237370790265,0,0,1.26509846009751,0,0,0,0.301150238155546,0.383959833463255,0,0,0,0.201606743224732,1.87208137048455,0.868946423296794,4.87613732627923,1.34140171940727,0.383587685530591,1.44575660953827,0.50133791063589,1.30361867064741,0,0.486634870302636,0.189069634328136,0.886917589850256,0.263504357079378,0.196468613246569,0.728590576585084,0.741568885568859,0.649094787309367,0.696518949197069,1.06366368415092,0.238490624305342,0,0,0.39752481473341,0.860234595106124,1.38856200643038,0.56530794192401,1.67799774483962,0.825354125820202,0.208994966536811,0.516833518338658,1.42306505074684,0.33472061276467,0.805658634218294,1.52054421143703,0.732186172644509,0.367663080345869,0.81014194788176,0.535798369704479,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0.993943903390637,1.77282716330412,0,1.43418310374407,0,1.12135520028461,2.1349799145941,0.74000264525148,0.311211035399766,0.538842688278752,0.490385709340376,0,0.576175924479999,0.234321431833797,0.936480230490962,0,0.597794722207204,0.352303495931295,0.971237666208789,0.140450806702248,0.61246251376468,0.491337269247072,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0,0.375355559615893,0.831192346452549,0,0.612975591598039,0.150238058906597,0.340296549480063,0.89694817844431,0,0.211931901159562,0.600182192168805,0.618315175430633,0.257640540045629,2.23340227597908,0.168776332241266,0.292311015483596,0.504867548488229,0.552299391853796,0.484938170456436,0.355009592516614,0.503760491138201,0.847802961552438,1.35282597214308,0.272746120590835,1.14721838155602,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,3.25057549622385,0,1.30137480043828,1.01150814046861,0.482022059766964,2.20587945464788,1.52515610864684,1.18635309555548,1.48314438976181,0.588664395376038,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,1.96565443335525,0,0.441463099414651,0.245976877086227,0.343135620597051,0.439001141634502,1.1240175325762,2.01057944823262,0.277765335475589,0.325808305310325,0,1.44331342025273,0.463721619900307,0,0,0.462985512576611,0.951270761172991,0,0,0.738651018262192,0.468008530278475,1.0404181360211,0.93733833986777,1.34385702559088,0.567100388969546,0.626909658919938,1.74380363108377,0.383382679165211,0,0.264145302039678,0,0.432359860250884,0.12624243342638,0.253991577168676,0,0,0,0.411309970813294,0.901029173531752,0.285826432630578,0,0,0.4400297149257,0.387815147273333,0,0.845302752556,0.531876233169741,0,0.514414748524284,0,0,1.00084595560703,1.08524321078289,1.64648067356154,0,0.355391948742546,0.791951872933429,0,0,1.09970290300263,6.08118903205952,5.02257091432126,8.43335757932127,0.958499421966331,3.44585807502342,0,0.868687840005475,1.2328579353023,0.358121926479791,1.34502172792233,0.591092280605782,0.431255149719035,0.641715181398742,0.254094624222463,1.30139853857622,0,0,0,6.74106321552464,5.9832291840805,1.24324654030811,0,2.00068208423871,0.813795071099207,1.03985430765404,1.96271887676878,2.20783381047509,0.35142424497814,0.300946099727719,0,0,2.65690239414175,0.368738337083406,0.521301686808497,0.195801157462741,0.343143423810856,0.413536052245775,0.862856803274467,1.28073069364133,0.606255142892519,0,0.30239029332968,0.496215615637554,0.460385919864187,1.12264037773229,0.640695746278505,0,0.64341568457443,1.48418066444991,0.925258162815933,0.177561725313127,0.164254312027618,1.03850885836724,1.04589340613963,0.362578348774867,1.00253235151642,1.28913384510255,0.34444334449382,1.45672934405374,1.04899531967539,0,0.385076685522074,0,0,0.73886140225013,1.13733384070897,0.340187410553031,0.431831832204279,0,0.270946437543853,1.00337954770971,0.509752546090077,0,0.671624264166535,0,0.522870902049801,0,0,0.325378394664303,0.412164046590889,0.27470839445503,0.41254749960294,0,0.650060246036521,0,0.580024309752732,0.616194468458578,0.460511024178389,0.551346289938122,0.644521469209642,0.580066775656914,0.681813019328807,0.356128142586949,1.4875642382488,0.960950336825531,0.510450849978337,0.708104465988849,3.71876439437829,0.62962469366128,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.762520775695299,0,0.855877976067841,0,0.78494864019923,0.359744915166629,0.54907405947211,0.706874414074119,0.404364963146632,0,0.421258456238981,0.48763373908959,0,0,0.682499557039929,1.1312434556297,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0.281695602532241,0.430234056612155,0.0982490410131212,0.35667105148125,0,0.844430541190656,2.30506425071931,0.75894634753143,0.349934720244983,0.48111056362756,0,0,0.282431402330337,0,1.68471475667626,0.443430153536676,0,0,1.52927441428475,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0.213648142254946,0,0.245040215981032,4.64507937814297,0.432807638929335,0.284567373393656,0.956557636372934,0.997896857164083,0.191505370132367,0.211673582723883,0.324621940274555,2.24637742490767,0.228234679033192,1.72347885350326,0,0.677167111206413,0.642352300414798,1.00899853595524,0,0.343505344755765,0.307240764308458,0,0.166849141711909,1.36771666781428,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.293016358543788,0.36408156524854,0.334330152832435,0.568272293612826,0.47748896947538,0,3.99308912729002,0,0.422008249231538,1.00177834520615,1.15362711958732,0.63337622438398,1.39473591775749,1.10513566212459,0,0.920418142519393,0.615424027305347,1.24415835064723,0,0.179021174675609,0.511572370226872,0.0986434056369336,0,1.11136990144637,0,0.463840490809256,0,1.04171104434093,0.349839999984783,0,0.227586896570999,0.254253650292766,0.945550727071745,0,0,0.347249989866585,0,0.723578631752448,0,0.221158519862449,0.591095237907095,0.219385397153973,0.10893846351899,0.697118721393016,0.384751292518985,0.797594390929008,0,0.0897576444097721,0.434589487688032,1.91400695839152,0.457987967009312,9.06159119231679,2.04386596391473,0.156980256395025,0.997270091400938,0.225595660617181,0.392125068635479,0,0.569261198172555,0.158936578980379,2.95397290339238,0.816164040795739,0,0.432777279484182,0,0.442287822516696,0,0,0.123563938946503,1.14864144456001,0.067401132980677,0,0.234264445725339,2.18945747058799,0.19566461893209,0,0.394584402849391,0,0,0.568679216656392,0.150323419414493,0.414752765588989,0,0.330991955875499,0,0,0.284609546029793,1.24807205711825,3.81831424337288,0.391969589657511,0.34823682632161,0.873633341210151,0.51595809741485,0.870806981601766,0.292357268344742,0.246346371159628,0.872901148395775,0,1.35588444468319,0.137041924646751,0.397429223405979,0.126621591911757,0,0.320635281006135,0.426905989478705,1.59847687665704,0.576361668616424,0.229073192331831,0.857974989309823,0.432164393964449,0.372757606696298,0,0.135904206073614,0.313808538937,0.305994652908965,0,0,0.136905378891993,0,0.429765441419957,0,0.558564802544508,0.687481272035051,0,0.399358000997982,0,0,0,0.720599767084807,0,0.315132729228895,0.329663433524666,0.26961417541674,0.590564889088493,1.35477331305255,0,0.953423842781029,0,0,0,0.2249738915515,0,0,0.670869375198532,0.472834243795189,0.157363764404994,0,1.25501137532991,0.191915197319445,0.714695326373367,0.662091970365432,0.25426853765475,1.62899880526114,0.864221491201268,1.63293680054705,0,0.246277562248017,0.340776043570843,0.113312091520126,0,0,0,0.26446520348538,0,0,0.427149650270779,0.157204305099666,2.07119527673598,0.496166021811951,1.38328142328561,2.43585196761792,0.638341257770182,0.544017803369474,0,0,0.655745261419609,0,0,1.34228891392159,0.625954653532499,0,0.332787154610557,0.0620964029413835,0.830091809617385,0.249960815924213,0.454947352624943,0,1.17632909849086,0.936669811613763,0.28984205722165,1.04478362020812,0.934853239388898,3.32883516901568,1.51522404220071,2.0125432140206,1.77962244319307,0.457680136793847,1.20984739010591,1.70980920641059,1.03498604992744,1.27437413730962,0,0.931577741257556,0.414706207840855,3.19010057469594,0.521745061811734,1.50257608997218,1.52322084867518,2.44122439922797,1.81848659202559,1.07410557042488,1.39210127963548,1.59238355479446,1.60011105865261,1.37358282073117,1.01024846629776,0,0.57785949122191,0.857766365499703,0,1.81364740409818,0.926089897295336,1.46842022703881,5.55175407352611,1.23520578864389,0.877136198314828,0.353378291891762,1.3503982678964,0.337884881306145,0.256241518587947,0.690860683462397,0.303859956177382,0.553033744606923,0.389720617678777,0.797189041880179,0.163565394255844,0.982829546539238,1.72041036127604,0,1.39991177098451,0.640150378164845,1.20550485762571,0,1.28874165176289,0.139879507719444,1.24415452006595,0,0,0,0.218419276384028,0.33946505990805,0.212574920101683,0.123935764259002,0,0.318004350653419,0.315446980005013,0,1.05802783107205,0.918736432059601,0.192687675289379,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0.322951291263702,1.42769420259154,0.294443155503077,0.11796972334774,0.917142992608395,0.577628330751691,0.762764190934334,0,0,0.0752103283492573,1.0085253435176,2.34454203369928,0.261906694481422,3.60298218522213,0,0.0675375846183947,0,0.206686796501184,0.253663240775627,0.546974809018219,2.19303106742873,1.48863353516788,0.351742488719241,0.766574565837572,0.535701835878287,0,0.606965604236632,0.227662191351298,0.266107110487916,2.7656157013387,0.342976018874837,0,0.197318320688547,0.945550727071746,0.333694205676207,0.156986185701028,0,0,0,0.863710364874486,1.43325506366115,0.142953088353313,0,0.697448552208751,0,0.801711364730253,1.24329698497822,1.0243108625637,0,0,0.709992004383392,0.511280428554946,0.846774100381858,0.22910686854405,1.86123831398592,4.77769469488717,2.01339777236026,0.196300467230486,0.365753774946808,0,0,0,0.485710993059139,0.233939463462106,1.39265542612958,0.594600453887843,0,0,0.452888530700021,0.385870790539723,1.31135736302374,0,0.245148321753905,0,0,0,0,0.849635573439084,0.751871343838829,0.128915775947154,1.39917618294901,0.178553938605658,0.352894871715692,0.722172300202514,0,3.66983426723633,0.430018749454354,0.473314686579554,0.203974470572744,0.436350690340377,1.0580536810308,1.48798007266701,1.84870251452567,2.16313281061895,0,0,0.126698501011437,0,0,0,0,0.454672189309436,0.803892390468535,0,0.310298987585686,0.213233981900981,1.1903221573187,0.129177819672012,0.372448285775147,1.34558235096736,0.381882949668989,0.808468755832877,1.30630048738177,0.684466602170562,0.202056159043763,0.573777643141411,0.332660356546013,0.244209805832924,0.426909383510862,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0.665756774185513,0.402547587182052,0.961705476909699 | |||
|short_description=p8@MBD2 | |||
}} |
Latest revision as of 19:33, 19 September 2015
Short description: | p8@MBD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MBD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_AL110266_5end |
EntrezGene: | MBD2 |
HGNC: | 6917 |
UniProt: | Q69YZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.25e-30 | 48 |
phagocyte | 8.25e-30 | 48 |
classical monocyte | 4.63e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.63e-28 | 42 |
monopoietic cell | 9.92e-22 | 59 |
monocyte | 9.92e-22 | 59 |
monoblast | 9.92e-22 | 59 |
promonocyte | 9.92e-22 | 59 |
macrophage dendritic cell progenitor | 1.56e-20 | 61 |
myeloid leukocyte | 1.25e-18 | 72 |
nongranular leukocyte | 1.56e-18 | 115 |
myeloid lineage restricted progenitor cell | 7.08e-18 | 66 |
granulocyte monocyte progenitor cell | 2.14e-17 | 67 |
hematopoietic lineage restricted progenitor cell | 3.03e-15 | 120 |
leukocyte | 4.98e-15 | 136 |
mesenchymal cell | 6.71e-14 | 354 |
connective tissue cell | 1.64e-13 | 361 |
hematopoietic oligopotent progenitor cell | 1.81e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.81e-11 | 161 |
hematopoietic stem cell | 1.07e-10 | 168 |
hematopoietic cell | 1.14e-10 | 177 |
myeloid cell | 3.70e-10 | 108 |
common myeloid progenitor | 3.70e-10 | 108 |
motile cell | 8.99e-10 | 386 |
somatic stem cell | 3.76e-09 | 433 |
multi fate stem cell | 5.63e-09 | 427 |
stem cell | 2.18e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.23e-18 | 76 |
bone element | 1.20e-16 | 82 |
skeletal element | 1.53e-15 | 90 |
immune system | 1.45e-14 | 93 |
hematopoietic system | 1.93e-14 | 98 |
blood island | 1.93e-14 | 98 |
skeletal system | 2.62e-13 | 100 |
connective tissue | 5.47e-13 | 371 |
hemolymphoid system | 2.43e-12 | 108 |
lateral plate mesoderm | 3.96e-07 | 203 |