FFCP PHASE1:Hg19::chr18:43753462..43753499,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147339 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28172 | |||
|TSSclassifier=strong | |||
|UniProt=Q96B23 | |||
|association_with_transcript=-488bp_to_ENST00000282059,ENST00000321319,NM_001008239,NM_145055,uc002lbw.2,uc002lbx.2_5end | |||
|cluster_id=chr18:43753462..43753499,+ | |||
|description=CAGE_peak_5_at_C18orf25_5end | |||
|id=chr18:43753462..43753499,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.86e-09!18;CL:0000789!5.86e-09!18;CL:0002420!5.86e-09!18;CL:0002419!5.86e-09!18;CL:0000790!5.86e-09!18;CL:0000542!2.16e-07!53;CL:0000051!2.16e-07!53;CL:0000084!4.97e-07!25;CL:0000827!4.97e-07!25;CL:0000838!5.35e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.14e-13;18!CL:0000789;9.14e-13;18!CL:0002419;9.14e-13;18!CL:0000625;1.83e-09;11!CL:0000084;1.20e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.68e-12,18;CL:0000789,3.68e-12,18;CL:0002420,3.68e-12,18;CL:0002419,3.68e-12,18;CL:0000790,3.68e-12,18;CL:0000625,8.30e-09,11;CL:0000084,4.49e-08,25;CL:0000827,4.49e-08,25;CL:0000542,7.77e-07,53;CL:0000051,7.77e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;9.14e-13;18 | |||
|ontology_enrichment_disease=DOID:162!4.07e-09!235;DOID:14566!2.39e-08!239;DOID:0050687!1.31e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.57e-08!61;UBERON:0000153!6.09e-08!129;UBERON:0007811!6.09e-08!129;UBERON:0003075!1.13e-07!86;UBERON:0007284!1.13e-07!86;UBERON:0002346!2.06e-07!90;UBERON:0005743!2.11e-07!86;UBERON:0000073!2.46e-07!94;UBERON:0001016!2.46e-07!94;UBERON:0002780!9.58e-07!41;UBERON:0001890!9.58e-07!41;UBERON:0006240!9.58e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.09e-08;25!UBERON:0000203;3.09e-08;25!UBERON:0001869;2.76e-07;32!UBERON:0002619;7.63e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.62e-08,25;UBERON:0000203,1.62e-08,25;UBERON:0003056,2.32e-08,61;UBERON:0001869,3.84e-08,32;UBERON:0002780,2.31e-07,41;UBERON:0001890,2.31e-07,41;UBERON:0003080,2.31e-07,41;UBERON:0006240,2.31e-07,41;UBERON:0001893,2.57e-07,34;UBERON:0002619,2.57e-07,22;UBERON:0002791,2.71e-07,32;UBERON:0001016,3.46e-07,89;UBERON:0000955,4.82e-07,68;UBERON:0006238,4.82e-07,68;UBERON:0001017,5.43e-07,81 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.783556884599516,0.982935746006035,0,0.218441372130172,0.791300934685361,0.247532705920093,0,0,0,0,0.487932798790507,0.492484232307152,0,0.313454721478088,1.14494394852423,1.09499540058307,1.38096903554283,0.382067028739756,0.57470412614962,0.393553906568396,0,0.383829398097213,0.309632246632152,0,0.30120591877825,1.10926203050036,0.46480320348181,0.995184627411951,0.587200878669695,0,0,0.434021741431704,0.895661896959697,0.647787332037959,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.633765858935825,0.212604299965044,0.209658645508376,0.22465726229299,0.300353785683013,0.48217676009124,0,0.39783335439818,0.182664153764634,3.51992488922645,0.546138611262131,4.44754626931777,2.56038133539904,1.60158394814405,1.14950487990897,1.32208974556972,0.954053754535364,2.27685187643779,0.587237189370939,0,0,0.560508562981536,1.58030450865046,1.57367816091066,0.786021525498329,1.02800749499755,4.17966238476695,4.56291173287027,2.8406868344084,3.89653456815823,2.89667187901451,1.47302953737419,1.32920336750173,2.70803863765016,2.81800903396485,1.8208308658383,2.46656856905514,5.25065033793112,4.34704628602579,5.93146252648242,6.68852070224283,6.27213142829861,4.64568305060021,3.83220493601921,2.74901956386104,2.78321661221453,6.37130828648194,2.60433381542567,4.75226022224187,3.01150238155546,3.58362511232371,4.99722906209383,3.07810427657222,3.28451198768419,1.00803371612366,0.534880391567015,1.01377082717959,0,0,0.511450247374121,0,0,0.144846518960824,0.795285947051099,0,1.32348744029695,0.886917589850256,0.966182642624386,0.458426764241994,1.09288586487763,0.741568885568859,0.324547393654683,0.870648686496336,0.132957960518865,5.96226560763355,6.29194401858141,7.80060752792086,0.39752481473341,0,0,0.56530794192401,0,0,0,0.775250277507987,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,0.25326102332916,0.397227542439656,0.860509862246441,0,0,0,0.74000264525148,0.622422070799533,0.269421344139376,0,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,1.71141546463335,0.298897361103602,0.822041490506354,0.647491777472526,0.842704840213491,0.408308342509787,0.61417158655884,0.619954687054593,0,0.247266929278557,0,0.718618141816238,1.0100166837244,1.00094815897571,0.554128230968366,0.438977620880838,0,0.600952235626387,0.567160915800105,0.538168907066586,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,0.515281080091258,0.18611685633159,1.5189869901714,0.292311015483596,0,0.644349290496095,0.484938170456436,0.355009592516614,0.201504196455281,0,0.966304265816484,0.818238361772504,0.286804595389004,2.19552671033272,1.72288698817931,1.62671520017326,1.14027160516907,0.756962552626885,2.55484151353081,0,1.28648187638577,0,0,0.721879481669586,1.41968160047813,1.01150814046861,0.723033089650446,0.882351781859152,1.08939722046203,1.42362371466658,0.808987848960987,1.37355025587742,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0.882926198829301,0.737930631258681,1.02940686179115,0.98775256867763,0,0.804231779293047,0.740707561268237,0,0,1.44331342025273,2.55046890945169,1.05667824812239,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0.984868024349589,0,0.297262324577456,0,0.671928512795438,0.708875486211932,0.268675568108545,1.16253575405585,0.766765358330422,1.47798971368783,0.352193736052904,0.207328115540772,0,0.12624243342638,0.761974731506028,1.14596527667483,0,0,1.23392991243988,0.901029173531752,1.42913216315289,0,0,0.22001485746285,0.258543431515556,0,0,1.06375246633948,0,0.771622122786426,0,0,0.57191197463259,0.542621605391443,0,0.325736184293735,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0.718874566474748,0,0,0.579125226670317,0.410952645100767,0.716243852959582,2.80212859983818,0.788123040807709,0.431255149719035,0.641715181398742,0.76228387266739,1.30139853857622,0.773288812777695,0.502548796003046,0,0,2.99161459204025,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0.356857977594324,0.315404830067869,0.702848489956279,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.434418072340414,0.391602314925481,0,1.44737618286021,0.862856803274467,1.06727557803444,0,0,0,0.496215615637554,1.07423381301644,0,0,0,0.321707842287215,0,0.462629081407967,0.177561725313127,0.574890092096664,0,0.813472649219715,1.20859449591622,0.601519410909855,0.184161977871793,0.114814448164607,0,0,0.451199612907412,0.847168708148562,0,0,1.26661954671451,0,0.170093705276516,0.431831832204279,0,1.08378575017541,1.00337954770971,0.509752546090077,0,0.895499018888713,1.97333888981341,2.0914836081992,1.28225062558195,0.984043937099117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| |||
|short_description=p5@C18orf25 | |||
}} |
Latest revision as of 15:08, 19 September 2015
Short description: | p5@C18orf25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C18orf25_5end |
Coexpression cluster: | NA |
Association with transcript: | -488bp_to_ENST00000282059, ENST00000321319, NM_001008239, NM_145055, uc002lbw.2, uc002lbx.2_5end |
EntrezGene: | C18orf25 |
HGNC: | 28172 |
UniProt: | Q96B23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.68e-12 | 18 |
alpha-beta T cell | 3.68e-12 | 18 |
immature T cell | 3.68e-12 | 18 |
mature T cell | 3.68e-12 | 18 |
immature alpha-beta T cell | 3.68e-12 | 18 |
CD8-positive, alpha-beta T cell | 8.30e-09 | 11 |
T cell | 4.49e-08 | 25 |
pro-T cell | 4.49e-08 | 25 |
lymphocyte | 7.77e-07 | 53 |
common lymphoid progenitor | 7.77e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.62e-08 | 25 |
pallium | 1.62e-08 | 25 |
pre-chordal neural plate | 2.32e-08 | 61 |
cerebral hemisphere | 3.84e-08 | 32 |
regional part of forebrain | 2.31e-07 | 41 |
forebrain | 2.31e-07 | 41 |
anterior neural tube | 2.31e-07 | 41 |
future forebrain | 2.31e-07 | 41 |
telencephalon | 2.57e-07 | 34 |
regional part of cerebral cortex | 2.57e-07 | 22 |
regional part of telencephalon | 2.71e-07 | 32 |
nervous system | 3.46e-07 | 89 |
brain | 4.82e-07 | 68 |
future brain | 4.82e-07 | 68 |
central nervous system | 5.43e-07 | 81 |