FFCP PHASE1:Hg19::chr18:31185530..31185578,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:31185530..31185578,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr18:31185530..31185578,+ | |||
|id=chr18:31185530..31185578,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;3.05e-34;1!CL:0000164;3.05e-34;1!CL:0000502;3.05e-34;1!CL:0000172;3.05e-34;1!CL:0000173;3.05e-34;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,3.61e-34,1;CL:0000164,3.61e-34,1;CL:0000502,3.61e-34,1;CL:0000172,3.61e-34,1;CL:0000173,3.61e-34,1;CL:0002351,3.61e-34,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.05e-34;1!UBERON:0009117;3.14e-14;10!UBERON:0005564;3.14e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;3.05e-34;1!DOID:5409;1.12e-09;4!DOID:169;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,3.61e-34,1;DOID:5409,1.12e-09,4;DOID:169,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.87e-29!20;UBERON:0001869!4.30e-28!32;UBERON:0002619!1.66e-26!22;UBERON:0001893!2.69e-26!34;UBERON:0002780!1.62e-24!41;UBERON:0001890!1.62e-24!41;UBERON:0006240!1.62e-24!41;UBERON:0003080!7.29e-24!42;UBERON:0002791!1.28e-23!33;UBERON:0000956!3.67e-23!25;UBERON:0000203!3.67e-23!25;UBERON:0002020!7.41e-23!34;UBERON:0003528!7.41e-23!34;UBERON:0001049!3.97e-19!57;UBERON:0005068!3.97e-19!57;UBERON:0006241!3.97e-19!57;UBERON:0007135!3.97e-19!57;UBERON:0000955!7.61e-17!69;UBERON:0006238!7.61e-17!69;UBERON:0002616!4.35e-16!59;UBERON:0003056!1.87e-15!61;UBERON:0001017!2.17e-15!82;UBERON:0001872!4.05e-15!5;UBERON:0005743!1.70e-14!86;UBERON:0003075!4.80e-13!86;UBERON:0007284!4.80e-13!86;UBERON:0000073!9.28e-13!94;UBERON:0001016!9.28e-13!94;UBERON:0000200!1.43e-12!6;UBERON:0002346!2.69e-12!90;UBERON:0007023!1.68e-11!115;UBERON:0002021!3.61e-09!5;UBERON:0000033!7.05e-08!123;UBERON:0002771!2.39e-07!3;UBERON:0000153!2.40e-07!129;UBERON:0007811!2.40e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.64e-17;8!UBERON:0003135;4.95e-13;11!UBERON:0000991;2.73e-07;21!UBERON:0003101;5.32e-07;22!UBERON:0000079;5.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.57e-17,8;UBERON:0003135,4.80e-13,11;UBERON:0000991,2.69e-07,21;UBERON:0009196,2.69e-07,21;UBERON:0009117,2.69e-07,21;UBERON:0005564,2.69e-07,21;UBERON:0004176,5.24e-07,22;UBERON:0003101,5.24e-07,22;UBERON:0000079,5.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.319267718114302,0,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,13.1337673903006,0,0,2.82190377816914,0,4.00650130072764,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10692662694782,4.82335434281121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:31185530..31185578,+ | |||
}} |
Latest revision as of 00:27, 26 July 2015
Short description: | p@chr18:31185530..31185578, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:31185530..31185578, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 3.61e-34 | 1 |
enteroendocrine cell | 3.61e-34 | 1 |
type D enteroendocrine cell | 3.61e-34 | 1 |
somatostatin secreting cell | 3.61e-34 | 1 |
pancreatic D cell | 3.61e-34 | 1 |
progenitor cell of endocrine pancreas | 3.61e-34 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.57e-17 | 8 |
male reproductive organ | 4.80e-13 | 11 |
gonad | 2.69e-07 | 21 |
indifferent external genitalia | 2.69e-07 | 21 |
indifferent gonad | 2.69e-07 | 21 |
gonad primordium | 2.69e-07 | 21 |
external genitalia | 5.24e-07 | 22 |
male organism | 5.24e-07 | 22 |
male reproductive system | 5.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 3.61e-34 | 1 |
lung small cell carcinoma | 1.12e-09 | 4 |
neuroendocrine tumor | 8.02e-07 | 6 |