FFCP PHASE1:Hg19::chr18:3013112..3013154,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14450 | |||
|TSSclassifier=strong | |||
|UniProt=C9JPF4 | |||
|association_with_transcript=158bp_to_ENST00000455369_5end | |||
|cluster_id=chr18:3013112..3013154,- | |||
|description=CAGE_peak_1_at_LPIN2_5end | |||
|id=chr18:3013112..3013154,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.98e-10!115;UBERON:0003075!2.59e-07!86;UBERON:0007284!2.59e-07!86;UBERON:0005743!3.50e-07!86;UBERON:0003056!7.96e-07!61;UBERON:0000073!8.97e-07!94;UBERON:0001016!8.97e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.16e-10,114;UBERON:0003075,1.26e-07,82;UBERON:0007284,1.26e-07,82 | |||
|phase1_expression=12.3541297903979,11.5614282901131,11.4173067317737,9.00659685178174,8.93922188854576,10.4680622892044,5.06599756336621,7.58063848112197,7.05201196139564,7.12628415854376,4.18680700783456,6.334799791775,3.9565046734268,9.90130823680373,10.9361133990212,2.01697543935533,5.42425075221579,2.92124036154949,4.39139518911456,8.24911089114479,5.50801866359483,5.95563970808367,10.018259549587,5.47497700291537,6.77930253811935,3.132949635666,2.95562122019805,3.06972047123349,7.08055698328027,6.90892916574983,6.65709330259127,0,0.6024118375565,0.739508020333575,0.387336002901508,2.41687695228617,7.63361142270603,6.09394949385065,4.41197784434312,5.859293509328,26.1981104860711,17.4902579650249,23.439376654711,51.9071712443046,28.7185717203495,40.9967063407409,25.1023359858139,27.5482484974623,27.5638670096642,8.05538698502021,11.5272317938095,17.7361672416439,12.4108445065183,16.1371170895957,21.6682378550947,29.3658049686463,22.6512104548012,25.1690302578495,12.8555234795779,17.009238435033,22.3767994029664,13.5239033076554,13.3640650606493,17.9014395223732,7.54544020434318,5.6738522469114,6.22822248995575,9.79869794501299,12.5155900420848,17.5922964211144,6.05399502633369,7.73383035573886,14.2408074348398,4.43636101255078,6.16552469898626,5.45112478321777,8.19999007369414,8.40990599912435,10.4471631353102,1.71007646244749,3.38158351238453,2.55729815270488,0,4.36910889009705,5.33705552318133,6.40095333849761,3.2031678962881,2.87376219977242,3.96626923670917,1.90810750907073,1.1384259382189,1.17447437874188,3.44045905312706,17.1822727152734,14.0127140745384,8.42829071280246,6.49142241375649,3.14408610199332,2.67281948699362,0.501559486172034,0.32592226663359,0.473447805734733,0,3.23090324967003,0,1.55073726208535,0.541607727530031,0.384273959177026,1.1705341280389,5.42645085192131,4.97430032014527,7.24507714337631,3.85545064221357,5.35081656179426,7.31748666634838,6.91186990455154,8.04763036564035,6.18529401868734,5.56643322442906,7.00843911513013,8.46408490013344,4.75226022224187,6.92645547757755,7.93516989157394,7.49584359314075,8.05042656949657,6.56902397536837,7.25784275609037,6.41856469880418,4.92402973201517,4.87613732627923,4.02420515822182,7.41602858692476,13.7346877906135,15.0401373190767,15.4985775288081,15.1104329939709,10.705967146658,24.2009131940014,14.1906814376041,17.4791223529321,22.3974219101089,1.09288586487763,0,2.59637914923747,2.08955684759121,2.92507513141503,5.24679373471752,2.28797964312051,9.65789503456869,16.4972798114365,12.0432843314857,15.9684630739493,18.0898541415683,13.8434813949269,9.07889538402223,9.19577852761967,24.8080088802556,29.1728335403102,21.7568398297036,13.696196781711,10.6438094800592,10.9827925896676,11.7652185710678,9.72170337458112,12.8591608729075,12.1245861218132,14.0764350604153,13.7984973719295,17.0867818722263,8.97688545258996,160.772109271997,104.700671320048,0,9.93943903390637,9.11739683984974,10.5927344650575,15.2023408996871,8.86670955495893,5.04609840128076,6.4049397437823,2.22000793575444,13.0708634867902,9.16032570073879,6.86539993076527,29.3633409631167,20.74233328128,17.339785955701,5.30672130611545,7.98660550162229,5.97794722207204,6.6937664226946,5.82742599725274,7.30344194851692,18.1697212416855,15.354289663971,16.8421023316498,16.6320400019487,19.0395535544489,11.8320977051943,5.74894513452991,12.9618807744631,15.7649335038675,17.1779751600193,9.2185300384976,9.50112166976961,15.9252342440993,3.74326204428069,15.0687293978644,14.9490172172997,14.8352330811693,12.6038260355449,11.1296731577514,19.0653999633766,12.8420630868797,6.75105328965065,3.70260619612555,10.0973509697646,12.1505866207835,9.86040946594752,13.1353549231147,8.06016785821122,8.47802961552438,0.773043412653187,2.45471508531751,1.43402297694502,6.46460642486856,7.1566074893602,9.41170937243099,11.2990549966754,4.28945446488568,12.0442528495024,9.38697193978896,4.5026865673502,5.52539685409922,6.50115099244771,3.60939740834793,3.19428360107579,3.37169380156203,3.37415441836875,1.98529150918309,3.4860711054785,3.79632990577755,2.96628877952362,2.35465758150415,3.8474715694639,7.38155454624648,4.20725321410337,9.0546282492908,11.7606969108434,13.9430538304014,32.4332981503617,7.08947888017685,2.20731549707325,18.8172310970964,13.382289203285,0.878002283269004,1.1240175325762,0.502644862058154,0.555530670951178,22.8065813717227,16.6389565644733,8.6598805215164,10.8974580676572,12.5627302832329,7.79578817909799,6.48179717607255,9.13219930726072,2.37061319387782,4.29243081047436,16.2503224017682,3.04205544681009,8.32334508816878,0,1.51183915378974,0.283550194484773,1.70161193135412,1.45316969256981,3.83382679165211,15.2725603747742,8.27655279724325,25.2940300959742,14.2678753882792,18.1789104133987,6.60378100638558,5.72982638337417,3.51652341630141,6.84289784090821,2.67351481028641,3.90445975197093,3.71574362419752,26.9114602428866,32.697005162496,12.8342000186663,13.7028018703244,7.15312891703765,4.22651376278,14.0947201789981,13.5209667984776,5.91576960802927,1.41849132023278,5.86128793835419,17.0143812453196,8.13932408087165,15.6415663988346,5.5375151329935,15.2818537959295,6.33561498346743,5.72734816413214,4.35766729300147,3.69900067373611,9.72990245129524,14.0631985600995,6.32501818449095,5.75099653179798,12.6348129417525,8.5582143024431,6.65994010670864,8.83548186966649,6.08807275015645,8.96681151948218,6.89607660706745,6.68445482064504,5.39040752374943,25.4094624222463,15.6167824629146,4.63973287666617,4.52293916402742,3.18969375826582,48.6854565565669,38.8909896965232,37.7118117226792,17.544883315837,11.5039219843726,10.5793359242897,9.15071790735551,5.88815663030634,8.98903765693428,9.48845461440977,9.32932909155929,2.27407504055985,7.24311499047534,6.64225598535437,6.82165923604302,13.5538438570209,13.1186775500036,11.6668764095691,6.6165768359324,7.54999702865159,8.75165973988244,3.33440328590885,4.99306318531491,4.23346410661552,11.4129591596637,16.5738931151107,10.3844234940237,9.73857534343327,9.72243773226737,8.36440389946759,14.8418066444991,6.01417805830357,3.55123450626254,8.1305884453671,12.4621063004069,7.43746422143739,12.9319611063036,2.20557117333613,0.460404944679482,11.3666303682961,14.5672934405374,14.1614368156178,8.12159303233341,5.08301224889137,6.27479815341484,4.38417673959782,6.22754610467967,12.5106722477986,13.4374027168447,4.31831832204279,6.16909010761157,4.87703587578935,5.51858751240339,7.13653564526107,6.64860807142979,7.16399215110971,16.883010501737,15.4246916104691,24.1063117609406,60.0266801630462,33.1885962557589,21.535571434374,8.79066862256097,12.5414439879294,1.14853107599234,0.650060246036521,16.068392984416,7.54031602678551,7.24028500438829,7.82868741103261,6.47831890677294,15.2536747712949,10.4412019618245,6.22154380137537,3.20515328328254,2.64455864577565,3.65161127993702,2.93509238737543,3.33820676823315,2.32422774648643,15.1109926478707,10.455559052409,8.62494024493049,4.7907542728532,8.69932992075073,5.74505079222152,6.01124524316363,15.2584931437464,18.9827654831236,11.4378116354295,9.72411606983069,8.98671874871233,9.22789418985217,4.70969184119538,16.1885211824983,14.2759255462748,11.8990526369143,4.24583211303964,0,5.47635993110675,5.36397112998549,10.2359665645139,12.6780176108107,13.1039914951666,16.6858409705381,3.39024349860728,7.71911480964574,9.28814565337708,13.5919774428666,3.47265320560013,12.462000288886,8.52223583243357,5.5768229657955,6.76069446077379,10.3256173586917,7.17217999395784,6.06340787518125,9.57854872990614,8.2331977766089,15.1475650761555,20.4915513833486,19.596344333719,0.48111056362756,0.670302275535787,0,18.0756097491416,0,0,0,1.60806380144872,37.0436754739484,38.2318603571188,27.3430649843598,38.1170840732462,40.313502762447,42.1507652275266,35.1020434204775,23.7937552888281,11.750647824022,3.84991942105343,0.980160863924127,10.2191746319145,9.66603726942181,9.03501410524859,1.59426272728822,13.7709766288643,8.0432255455594,8.6786168916792,1.62310970137278,7.86232098717685,10.0423258774605,4.38703708164465,12.5317238545034,10.3267984458978,2.24823305145179,4.237793851012,6.38769356535489,12.3661924112075,2.45792611446766,2.68411329470899,3.50383197595008,3.71237381263877,8.07377904296203,19.693983831634,4.32729085561573,18.9851021758757,12.6888304579065,4.6785135102055,16.4089160784521,2.06312886974173,9.8070178164181,5.68272293612826,7.1623345421307,1.18785872333055,1.22864280839693,4.97073823883149,17.3023382184931,15.2492925881381,0.988823245360557,12.6675244876796,15.1428471070813,7.18338180380984,33.2551227167644,4.09074730008619,3.69254416383208,8.70910845453061,6.74012633604951,0,6.13886844272246,11.837208676432,16.7638164642858,33.3410970433911,19.3866549219044,13.080301840821,3.99227596002388,9.11497163798316,1.48681999993533,19.5749885367394,0.910347586283997,21.6115602748851,1.18193840883968,6.20538071834636,1.16641845353302,12.8482496250636,15.0576035588353,17.3658871620587,12.2065389053667,15.8128341701651,10.6397142823277,11.8468114463145,4.4664770042786,2.37020365273626,9.69573257147843,23.6999476161762,2.76676685265672,5.38545866458633,4.45454224880233,25.5200927785536,14.2892245706905,19.1892519366708,0,9.57579564009651,11.6348177330109,13.0845483157965,13.9204399365595,14.7682996538742,19.1651270051427,5.08597052737212,2.10998064528027,38.0332443010814,20.6375484293554,11.2522092665887,10.9478812418636,13.3570922400042,15.8867837682743,8.00607047437679,4.07760998523459,4.49014382873458,23.7251988091983,12.8412423567806,10.7761645033656,3.28418620588199,16.6314926092276,8.01175252462506,5.91876604274086,6.04953580243319,8.57003732565372,24.7691392143673,12.7774906502319,7.88030254619078,53.836963689282,19.5285253966544,34.5326210247948,40.620626122806,14.5150868475194,5.13096290148613,2.2562765983567,0,6.18120366720858,11.531960103974,5.67553907156335,9.38536413504126,15.2756672710128,9.52539301817227,5.33439590686307,23.3878735732476,11.7509985205877,2.87788041758177,7.7498698564166,14.118307498161,22.6839603972372,10.4206466326994,14.0878976527973,2.39771531498556,46.5412047407762,8.0175617316141,16.1299297990247,8.93139747526528,10.6857180586272,0.235694034616795,9.24148601300575,10.355681784921,12.035789681086,18.7817883435987,10.2071449080664,15.1964970570112,17.8845223293761,18.4799139810582,0,13.1262728597959,14.6662671367478,9.33234931949858,3.39454300848285,4.29226048136571,5.13294352116307,17.8708036814692,7.92659743793288,29.1239873818635,22.2956405929443,18.1314888438566,22.8498013665687,42.717526977401,7.53592655385482,12.7236750369489,27.6492914406498,6.10861964167073,5.63911690048659,5.81616473240859,2.92466059016951,4.6428117273477,16.3416307410086,0.670869375198532,33.5712313094584,32.7841175843738,41.7121329251656,5.02004550131965,14.9693853909167,7.14695326373367,3.31045985182716,3.30549098951175,8.6879936280594,5.18532894720761,5.87857248196936,23.9460383124975,12.3138781124008,8.00823702391482,25.3819085005082,22.2759395190685,30.4765844498109,15.255388850663,16.3968426160936,10.9495576245971,7.04815022316672,16.9791985982635,49.3621518012951,24.8543433208317,3.96932817449561,5.53312569314244,4.50632614009315,0.638341257770182,17.9525875111926,16.2948431114755,11.6411319170115,19.6723578425883,8.63797529376289,8.86068179966986,10.006153721961,20.280930774453,12.0415931094915,19.523513070486,21.5474518206601,11.2062394298347,4.24933387071162,6.21761381920756,5.99477200444432,16.2333415591738,10.3033679277514,6.95620937331961,7.61199494723058,13.3216586612918,3.32883516901568,16.6674644642078,14.5909383016494,19.5758468751238,14.6457643774031,11.3423192822429,8.39360883147014,5.91420599958536,8.76132219400363,19.341533823035,7.76314784381297,7.05000553329454,11.6970354405518,20.3480574106576,7.3626228408637,8.3777146677135,4.06870733204662,12.1838601665715,8.27061289227161,11.1368102370838,17.5162191027391,9.20063858725253,10.3018711554838,7.40848875285022,20.1895837165842,6.74169406425562,2.14441591374926,5.48088013126944,5.44094221229454,2.77826969188601,15.9078857929204,11.6407746702967,0.308801447160972,5.92066933862509,8.12770071351053,3.08662461233464,26.0171358605732,0.76872455576384,2.76344273384959,12.4582582032727,15.7614617212973,4.87150772098471,6.1117826544147,5.23409261618701,6.55219697692825,8.35627889762646,15.4257850051798,0.999936979274649,9.49556394277854,5.16644938982447,6.81019144280203,23.3814556819838,0.139879507719444,3.73246356019784,4.22051425302051,6.68513830659427,9.43595651135378,4.04075661310451,2.7157204792644,2.33832412111851,5.7010451559141,2.79322458986622,11.7661609741765,23.2642147753697,1.60114149657094,5.99549104274163,9.18736432059601,15.8646185988255,8.5017945795351,13.8881457379722,11.0762836690008,7.05800749420811,15.7678535618417,11.6262464854933,14.2769420259154,9.22588553909641,2.00548529691159,0.733714394086716,4.96760364446454,16.3994301050882,80.0817514229717,8.95122999523236,15.6437482966455,5.84944699240208,8.59665412356402,2.61906694481422,16.2134198334996,2.80926563812386,13.7776672621525,7.02970288752463,13.8480153655793,15.7905367382828,8.20462213527329,3.83780436800028,6.94695649745012,8.09007724054255,2.93853583571069,6.96412386641773,8.4070930554706,4.85572483389305,13.8873936724292,34.6826267335918,8.75778305423922,29.3244496137986,19.9831014951885,14.6015557309525,11.4648025657449,14.5713136478611,12.4804017632317,9.89828216470812,36.1551090674788,19.1763331306994,4.31855182437243,20.5433225791432,15.6533631746877,16.1173883967381,1.85986280589,14.7779531457193,26.4564750360983,4.76597177574985,2.7314956335032,6.91259661814092,6.02318302348389,17.8681321103154,21.1329243802711,5.08064460229115,14.2046258497311,16.7511448258733,3.82215575590973,14.0937844065218,14.2317838742102,19.1411142222163,0.647428837187895,2.05325613712494,4.6392577253528,6.79995390282795,7.01818390386317,13.528652710973,7.25412553743168,4.74373544563632,7.69583617218004,44.0811503214687,17.2098372580717,18.3590030823324,37.6253837089218,12.7477127312031,22.3892719746545,13.9379011651611,28.2194080310732,13.5249832826688,8.66628284907866,13.1577485171795,25.0741184217215,6.39623397919545,2.67830907908486,3.88184358887261,6.09834386837679,40.1685013535584,3.21110498383179,19.2075041422945,8.99297904501152,15.5020597635285,6.54526035510566,18.515939418039,10.415860508669,6.47045880083986,6.48939843185684,10.4718132613116,6.66519988978543,8.86889507080059,10.1988829741982,21.1101750159793,20.4925625962704,16.045282514712,20.9906994064523,22.508986933119,10.7792027129641,20.3763001847934,8.10289131223727,15.7122524766069,3.61697895081634,9.06290828719525,18.7260210509624,15.5935537781504,12.3291485264514,2.39488422686657,3.76456631193809,5.65757245322535,8.53494244172849,16.3003574707547,10.7452314566486,31.6980217256815,21.2379510515634,7.45549177484671,7.03922827210363,13.2020759717496,18.3103280242082,17.3096761288233,8.85604691800515,2.56454793842586 | |||
|short_description=p1@LPIN2 | |||
}} |
Latest revision as of 06:29, 19 September 2015
Short description: | p1@LPIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_ENST00000455369_5end |
EntrezGene: | LPIN2 |
HGNC: | 14450 |
UniProt: | C9JPF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.16e-10 | 114 |
neural plate | 1.26e-07 | 82 |
presumptive neural plate | 1.26e-07 | 82 |