FFCP PHASE1:Hg19::chr18:29671969..29671976,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17765 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=132bp_to_uc002kxg.2_5end | |||
|cluster_id=chr18:29671969..29671976,+ | |||
|coexpression_cluster_id=C593 | |||
|description=CAGE_peak_8_at_RNF138_5end | |||
|id=chr18:29671969..29671976,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.37e-15!140;CL:0000037!8.27e-14!172;CL:0000566!8.27e-14!172;CL:0000988!1.05e-12!182;CL:0000791!2.67e-12!18;CL:0000789!2.67e-12!18;CL:0002420!2.67e-12!18;CL:0002419!2.67e-12!18;CL:0000790!2.67e-12!18;CL:0000838!6.88e-12!52;CL:0000542!1.63e-11!53;CL:0000051!1.63e-11!53;CL:0002031!2.25e-11!124;CL:0002087!3.24e-11!119;CL:0002032!4.19e-11!165;CL:0000837!4.19e-11!165;CL:0000084!4.76e-10!25;CL:0000827!4.76e-10!25;CL:0000624!3.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.23e-24;18!CL:0000789;2.23e-24;18!CL:0002419;2.23e-24;18!CL:0000624;6.36e-24;6!CL:0000784;1.29e-18;3!CL:0000623;4.73e-18;3!CL:0000767;2.19e-17;3!CL:0000226;3.24e-17;3!CL:0000842;3.24e-17;3!CL:0000084;4.00e-17;25!CL:0000542;2.74e-13;53!CL:0000625;1.55e-08;11!CL:0000898;2.12e-08;3!CL:0000094;8.12e-07;8!CL:0000895;9.50e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.77e-24,18;CL:0000789,1.77e-24,18;CL:0002420,1.77e-24,18;CL:0002419,1.77e-24,18;CL:0000790,1.77e-24,18;CL:0000624,4.81e-24,6;CL:0000838,1.43e-21,52;CL:0000542,4.19e-21,53;CL:0000051,4.19e-21,53;CL:0000738,7.65e-19,136;CL:0000784,1.45e-18,3;CL:0000623,3.88e-18,3;CL:0000825,3.88e-18,3;CL:0000767,2.83e-17,3;CL:0000084,3.40e-17,25;CL:0000827,3.40e-17,25;CL:0000226,4.42e-17,3;CL:0000842,4.42e-17,3;CL:0000037,2.65e-14,168;CL:0002087,1.46e-13,115;CL:0000988,2.54e-13,177;CL:0002031,1.07e-08,120;CL:0002032,1.38e-08,161;CL:0000837,1.38e-08,161;CL:0000625,1.48e-08,11;CL:0000898,1.49e-08,3;CL:0000810,5.69e-07,1;CL:0000895,5.69e-07,1;CL:0002436,5.69e-07,1;CL:0002427,5.69e-07,1;CL:0002428,5.69e-07,1;CL:0002429,5.69e-07,1;CL:0002433,5.69e-07,1;CL:0002431,5.69e-07,1;CL:0002432,5.69e-07,1;CL:0000094,8.90e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-24;18!CL:0000051;2.74e-13;53!CL:0002427;9.50e-07;1!UBERON:0005425;9.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.50e-07;1!UBERON:0001785;9.50e-07;1!UBERON:0002464;9.50e-07;1!UBERON:0004904;9.50e-07;1!UBERON:0001021;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,8.02e-07,1;UBERON:0001785,8.02e-07,1;UBERON:0002464,8.02e-07,1;UBERON:0004904,8.02e-07,1;UBERON:0001021,8.02e-07,1;UBERON:0003902,8.02e-07,1;UBERON:0005425,8.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,1.18009283054671,3.45446458287491,1.08371286321253,0,0,0,0.154934401160603,0,0,0,0.401088894940283,0.651032612147555,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,1.70763890732835,1.17447437874188,2.6759125968766,1.32171328579026,1.68152568894461,0,3.14735632182133,2.35806457649499,5.14003747498773,0,2.60737813306872,0.946895611469467,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,1.77943875794473,1.07016331235885,1.04535523804977,0,1.91610246800961,1.03088233644789,1.26509846009751,0.318565414324097,0.651083453856419,0,0,0,1.24930726552346,0.236777252044017,0,2.82249440514625,3.20928234940209,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,3.10037811596945,5.14795419702115,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.75843064282698,3.23441362289276,2.56686072559497,0,1.30139853857622,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,1.07857100409308,2.13455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0.307240764308458,0.223676107892416,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0.21787692703798,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0,0,0.146178634172371,0,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0,0,0,0,0.171594997861965,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.160753148465019,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0,0,0,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0.236664001461131,0,0,0,0.62041277132864,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,1.13668047327359,2.14371304124943,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p8@RNF138 | |||
}} |
Latest revision as of 06:09, 19 September 2015
Short description: | p8@RNF138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_RNF138_5end |
Coexpression cluster: | C593_Dendritic_CD8_Natural_CD4_CD19_Basophils_Peripheral |
Association with transcript: | 132bp_to_uc002kxg.2_5end |
EntrezGene: | RNF138 |
HGNC: | 17765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 8.02e-07 | 1 |
cranial nerve | 8.02e-07 | 1 |
nerve trunk | 8.02e-07 | 1 |
nerve connecting eye with brain | 8.02e-07 | 1 |
nerve | 8.02e-07 | 1 |
retinal neural layer | 8.02e-07 | 1 |
presumptive neural retina | 8.02e-07 | 1 |