FFCP PHASE1:Hg19::chr8:57353745..57353754,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:57353745..57353754,-
|short_description=p@chr8:57353745..57353754,-
|description=CAGE_peak_at_chr8:57353745..57353754,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:57353745..57353754,- | |||
|coexpression_cluster_id=C309 | |||
|description=CAGE_peak_at_chr8:57353745..57353754,- | |||
|id=chr8:57353745..57353754,- | |||
|ontology_enrichment_celltype=CL:0000667!5.85e-22!6;CL:0000058!5.85e-22!6;CL:0000138!5.85e-22!6;CL:0000153!2.19e-20!9;CL:0000447!2.19e-20!9;CL:0000327!6.81e-13!14;CL:0000499!4.06e-11!27;CL:0000135!7.04e-08!3;CL:0000386!7.04e-08!3;CL:0000388!7.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.62e-41;6!CL:0000153;2.12e-27;9!CL:0000447;2.12e-27;9!CL:0000327;1.31e-16;15!CL:0000499;1.21e-13;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.04e-40,6;CL:0000138,1.04e-40,6;CL:0000153,2.60e-27,9;CL:0000447,2.60e-27,9;CL:0000327,1.48e-16,15;CL:0000499,1.21e-13,28;CL:0000151,4.64e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0003099;4.72e-17;1!UBERON:0003852;4.72e-17;1!UBERON:0010122;4.52e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;3.71e-09;2!DOID:3193;4.52e-09;2!DOID:962;4.52e-09;2!DOID:171;4.73e-07;10!DOID:3095;6.82e-07;22!DOID:2994;6.82e-07;22 | |||
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|short_description=p@chr8:57353745..57353754,- | |||
}} | }} |
Latest revision as of 19:01, 31 July 2015
Short description: | p@chr8:57353745..57353754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:57353745..57353754, - |
Coexpression cluster: | C309_normal_Chondrocyte_small_Fibroblast_tenocyte_neuroepithelioma_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.04e-40 | 6 |
chondrocyte | 1.04e-40 | 6 |
GAG secreting cell | 2.60e-27 | 9 |
carbohydrate secreting cell | 2.60e-27 | 9 |
extracellular matrix secreting cell | 1.48e-16 | 15 |
stromal cell | 1.21e-13 | 28 |
secretory cell | 4.64e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.71e-09 | 2 |
peripheral nerve sheath neoplasm | 5.08e-09 | 2 |
neurofibroma | 5.08e-09 | 2 |
neuroectodermal tumor | 5.26e-07 | 10 |
germ cell and embryonal cancer | 7.32e-07 | 22 |
germ cell cancer | 7.32e-07 | 22 |