FFCP PHASE1:Hg19::chr17:79874727..79874731,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:79874727..79874731,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr17:79874727..79874731,+ | |||
|id=chr17:79874727..79874731,+ | |||
|ontology_enrichment_celltype=CL:0000860!9.65e-14!45;CL:0002057!3.54e-12!42;CL:0002009!2.63e-11!65;CL:0000066!5.42e-11!254;CL:0000063!5.46e-11!578;CL:0000557!5.73e-11!71;CL:0002194!5.80e-10!63;CL:0000576!5.80e-10!63;CL:0000040!5.80e-10!63;CL:0000559!5.80e-10!63;CL:0000839!2.10e-09!70;CL:0000766!1.78e-08!76;CL:0000763!2.04e-08!112;CL:0000049!2.04e-08!112;CL:0000548!2.11e-07!679;CL:0000004!2.11e-07!679;CL:0000255!2.11e-07!679;CL:0000012!3.61e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.18e-11;5!CL:0000860;2.43e-09;33!CL:0002057;2.43e-09;33!CL:0000473;9.46e-07;39!CL:0000234;9.46e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.85e-11,5;CL:0000860,8.29e-10,42;CL:0002057,8.29e-10,42;CL:0000473,2.11e-08,48;CL:0000234,2.11e-08,48;CL:0002009,9.55e-08,61;CL:0000557,6.49e-07,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-07;42 | |||
|ontology_enrichment_disease=DOID:305!1.06e-30!106;DOID:0050687!1.04e-27!143;DOID:14566!1.54e-24!239;DOID:162!1.93e-23!235;DOID:1749!3.26e-14!14;DOID:299!1.16e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.11e-15;14!DOID:4929;9.54e-13;2!DOID:3111;3.29e-07;1!DOID:3112;3.29e-07;1!DOID:3347;3.29e-07;1!DOID:3603;3.29e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.41e-15,14;DOID:4929,5.60e-13,2;DOID:3111,1.97e-07,1;DOID:3603,1.97e-07,1;DOID:3347,2.52e-07,1;DOID:0050687,2.56e-07,143;DOID:3112,3.02e-07,1;DOID:305,6.92e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001474!4.74e-09!86;UBERON:0002371!1.46e-08!80;UBERON:0004765!2.44e-08!101;UBERON:0001434!2.44e-08!101;UBERON:0002405!1.20e-07!115;UBERON:0001737!4.65e-07!9;UBERON:0000077!7.43e-07!130;UBERON:0001041!8.63e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.51e-10;10!UBERON:0000158;6.51e-10;10!UBERON:0000305;1.87e-08;7!UBERON:0000997;3.29e-07;1!UBERON:0004913;3.29e-07;1!UBERON:0005056;3.29e-07;1!UBERON:0003703;3.29e-07;1!UBERON:0004176;3.29e-07;1!UBERON:0001174;3.29e-07;1!UBERON:0004914;3.29e-07;1!UBERON:0002394;8.56e-07;4!UBERON:0003928;8.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.58e-08,7;UBERON:0004913,1.54e-07,1;UBERON:0003703,1.54e-07,1;UBERON:0001174,1.54e-07,1;UBERON:0004914,1.54e-07,1;UBERON:0000997,2.37e-07,1;UBERON:0005056,2.37e-07,1;UBERON:0004871,2.50e-07,8;UBERON:0005631,4.59e-07,14;UBERON:0000158,4.59e-07,14 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0.401088894940283,1.30206522429511,0,0,0,0.145398238779565,0,0,0.464858073811369,0.822335776043652,1.23882548358041,0.575384784644301,0.512321413058201,0,0.344745680736619,1.29096936716765,1.35426486594342,0.376484679085209,0,0,1.22433556948361,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,1.70215567407342,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,0,1.47311054395026,1.26584954976354,0,0.425208599930087,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.473227200159376,0.505754070234305,0.482022059766964,0.220587945464788,0.217879444092406,0.474541238222193,0.943819157121151,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.635020748171649,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0,0,0,0,2.86493381685228,0,2.76444631889309,0,0,0.445234820091624,0,0.211125408127993,0,0,0,0,0.123084805461069,0.311039587661807,1.07842021376792,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0.709163045303809,0,0,0,0,0,0,0,0,0,0,1.81250867562184,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0,1.5950057986596,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,1.46988596121566,1.13176968554523,0,0,0.19351266257817,0.146178634172371,0.328461828212837,0.484945082442097,0.0882561266915003,0,0,0.19871461170299,0,0,0.320635281006135,0,0.19980960958213,0.432271251462318,0,0,2.44893156579854,0.99402028452346,0.471388069233591,0.135904206073614,0.104602846312333,0.509991088181609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0.415440338029185,0.674921674654501,14.702237136601,0,0.335434687599266,0.0788057072991982,0,0,0,2.87872795979168,0,0,0,0,0,0.326587360109409,0,0.903017728242729,0.170388021785422,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0.470531639396343,0,0,0,0,0.554805861502613,0,0,0,0.457680136793847,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0.694567422971502,0,0.537266523244462,0,0,0.530067437837643,0.192914038270915,0.168942440653073,1.02496607435179,0,0.303859956177382,0,0.194860308839388,0,0,0,0.737318726261158,1.69049698686902,0,0,0,0.567515953566836,3.86622495528866,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0.825788063434183,0.183428598521679,0.924205329202706,0,1.3807198521202,0,0,0.20170506870352,0,0,1.31017534008077,1.92212912082159,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.115233987555779,0.342976018874837,0,0,0,0.667388411352415,0,0,1.12108865325516,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0.68732060563215,0.62041277132864,0,0.447421727191169,1.3741032706134,0.853425474875886,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,1.76447435857846,1.04313776695919,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0.327796715891087,0,0,0,0.459474497674225,0,0,0,0,0,0.426467963801962,0,0,0,0.33639558774184,0,0,0.217716747896961,0,0.26940821205835,0,0,0.488419611665847,0.426909383510862,1.9307228228694,1.25755282949222,0,0,0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| |||
|short_description=p@chr17:79874727..79874731,+ | |||
}} |
Latest revision as of 22:54, 25 July 2015
Short description: | p@chr17:79874727..79874731, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79874727..79874731, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.85e-11 | 5 |
classical monocyte | 8.29e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.29e-10 | 42 |
defensive cell | 2.11e-08 | 48 |
phagocyte | 2.11e-08 | 48 |
macrophage dendritic cell progenitor | 9.55e-08 | 61 |
granulocyte monocyte progenitor cell | 6.49e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.58e-08 | 7 |
hepatopancreatic ampulla | 1.54e-07 | 1 |
extrahepatic bile duct | 1.54e-07 | 1 |
common bile duct | 1.54e-07 | 1 |
duodenal papilla | 1.54e-07 | 1 |
mammalian vulva | 2.37e-07 | 1 |
external female genitalia | 2.37e-07 | 1 |
somatic layer of lateral plate mesoderm | 2.50e-07 | 8 |
extraembryonic membrane | 4.59e-07 | 14 |
membranous layer | 4.59e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.41e-15 | 14 |
tubular adenocarcinoma | 5.60e-13 | 2 |
cystadenocarcinoma | 1.97e-07 | 1 |
mucinous cystadenocarcinoma | 1.97e-07 | 1 |
osteosarcoma | 2.52e-07 | 1 |
cell type cancer | 2.56e-07 | 143 |
papillary adenocarcinoma | 3.02e-07 | 1 |
carcinoma | 6.92e-07 | 106 |