FFCP PHASE1:Hg19::chr17:79826565..79826606,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-66bp_to_BC007630_5end | |||
|cluster_id=chr17:79826565..79826606,- | |||
|description=CAGE_peak_12_at_ARHGDIA_5end | |||
|id=chr17:79826565..79826606,- | |||
|ontology_enrichment_celltype=CL:0000222!5.96e-08!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.06e-07,121;CL:0002321,4.16e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!6.20e-09!448;UBERON:0004120!6.20e-09!448;UBERON:0006603!6.20e-09!448;UBERON:0003081!3.22e-07!216;UBERON:0005256!4.62e-07!143;UBERON:0000055!9.64e-07!69;UBERON:0002100!9.75e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000077;3.07e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.62e-10,315;UBERON:0004120,2.62e-10,315;UBERON:0006603,2.62e-10,315;UBERON:0003081,6.93e-08,203;UBERON:0002100,1.37e-07,199;UBERON:0004872,1.42e-07,83;UBERON:0001008,1.45e-07,48;UBERON:0000055,1.47e-07,68;UBERON:0007500,1.63e-07,59;UBERON:0001981,1.63e-07,59;UBERON:0004537,1.63e-07,59;UBERON:0006965,1.63e-07,59;UBERON:0006554,4.45e-07,47;UBERON:0003914,5.33e-07,117;UBERON:0001637,6.70e-07,42;UBERON:0003509,6.70e-07,42;UBERON:0004572,6.70e-07,42 | |||
|phase1_expression=2.18014055124668,2.35510576280081,2.81908808191942,0,3.5756887554183,0.872338524100369,5.06599756336621,6.31719873426831,3.65659879479774,0.737201809504527,2.79120467188971,0.436882744260345,2.90143676051299,0.37129905888014,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0,1.63200552995402,0.940364164434263,0,0.684372125364421,0.125542639594803,0.534893840235659,0.492603536699674,0.393553906568396,0,0.767658796194425,0.464448369948228,0.919421224478927,2.409647350226,2.21852406100073,0.154934401160603,0.426507697462265,0,0,0.601633342410425,0.868043482863407,1.79132379391939,2.26725566213286,1.80302897343931,3.34415949192999,1.88937971844405,0.970336244751265,0.232429036905685,0.411167888021826,2.16794459626573,0.575384784644301,0.768482119587302,0.709446689665756,1.03423704220986,0.645484683583826,2.70852973188684,2.07066573496865,1.63743690034707,1.12361742222542,3.97909060082173,1.60464513538047,2.55734850319616,1.31940520074686,0.598390972864896,1.70489900213078,2.03146467040009,1.13477044938228,0.622822248995575,1.25624332628372,0.521482918420201,0.868755378820466,1.21079900526674,0.736555271975129,0.949387162322653,0,0.425208599930087,0.209658645508376,0.336985893439485,0.901061357049038,0.64290234678832,0.570025487482497,0.59675003159727,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0.569212969109448,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0.786839080455332,1.17903228824749,1.23360899399706,0.668745981562712,0,0.473447805734733,0,1.6711568532776,0.294605907474837,0,0.541607727530031,1.5370958367081,1.30059347559878,0.986627427622057,0.829050053357545,0.579606171470105,0.14828656316206,0,1.04535523804977,1.35971211237079,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0.76791966692651,0,0.473554504088034,0,0.80642697289893,1.60464117470104,0.579297615531196,0,1.34140171940727,0.12786256184353,0.722878304769133,0.50133791063589,2.17269778441236,0,0.486634870302636,0.0945348171640679,0.443458794925128,1.14185221401064,0.916853528483988,0.728590576585084,1.11235332835329,0.324547393654683,1.21890816109487,0.398873881556595,0,0,0.74291500265913,1.98762407366705,1.72046919021225,0.694281003215189,1.13061588384802,2.09749718104953,1.6507082516404,2.08994966536811,0.516833518338658,0,1.00416183829401,2.81980521976403,5.32190474002959,2.68468263302986,1.10298924103761,0,0.982297011124877,0,0.788280363383256,0,1.89853131913626,0.916008719652036,0,0,0,0.993943903390637,2.27934920996244,0.662045904066094,1.43418310374407,3.54668382198357,0,3.20246987189115,1.72667283892012,0,1.75123873690594,0.980771418680752,0.605429710579726,0.576175924479999,0.234321431833797,4.05808099879417,0.570471821544449,1.04614076386261,0.469737994575059,0.647491777472526,0.98315564691574,0.61246251376468,0.737005903870608,1.23990937410919,0,2.22540236350701,0.910161361938026,1.43723628363248,0.673344455816265,1.25118519871964,0.831192346452549,0.877955241761676,2.75839016219118,2.70428506031874,0.680593098960126,0.358779271377724,0.640672166455702,0.847727604638247,0.300091096084402,0.618315175430633,0.515281080091258,0.37223371266318,0.337552664482532,0.584622030967192,0.252433774244115,0.736399189138395,0.80823028409406,0.355009592516614,1.41052937518696,0.339121184620975,1.73934767846967,1.36373060295417,1.43402297694502,0.731842236777572,0,0.580969714347592,0.518305275076852,0,0.36497735907583,1.56449532329816,1.92972281457866,4.14404764057442,0,2.16563844500876,0.591534000199219,0.337169380156203,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,5.90524363699719,12.6217596423101,2.057870056657,0,3.80265104465493,3.9313088667105,2.95394953340702,0,0.368965315629341,0.514703430895577,1.42675371031213,0,0.703702806881416,0.277765335475589,0.651616610620649,1.03993478527958,0,0,0.234817388471643,1.73239737313289,1.38895653772983,2.09279567458058,0,0.858486162094873,0.246217006087397,0.702012795417713,0,1.87467667973554,2.35174979478403,2.55195175036296,0,0,2.30029607499127,1.97065295158377,3.52193736052904,8.08579650609011,7.78247748451592,7.70078843900918,0.698476837213859,5.72982638337417,21.0991404978085,8.55362230113526,2.15937734676979,1.50171528921959,0.857479297891735,1.23344192779897,1.30788020649984,0.1466765716419,0.775630294546667,0,0.845302752556,1.06375246633948,3.12022310734098,0.257207374262142,2.83698264046557,1.8649552531127,0.142977993658148,1.08524321078289,0,0.65147236858747,0,0.791951872933429,0.301439377059586,0,1.79951384127703,0,1.00451418286425,2.10833939483032,0.958499421966331,0,0,0.434343920002738,1.2328579353023,0.895304816199478,0.448340575974109,1.57624608161542,1.94064817373566,2.56686072559497,2.54094624222463,0,0,0.670065061337395,0.637938751653163,8.98808428736619,5.9832291840805,6.21623270154053,0.12269149171914,0.500170521059677,0.542530047399471,1.45579603071565,0.178428988797162,0.473107245101804,0.702848489956279,5.11608369537122,4.5481500811197,3.10419213877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| |||
|short_description=p12@ARHGDIA | |||
}} |
Latest revision as of 08:58, 18 September 2015
Short description: | p12@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ARHGDIA_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.06e-07 | 121 |
embryonic cell | 4.16e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.62e-10 | 315 |
mesoderm-derived structure | 2.62e-10 | 315 |
presumptive mesoderm | 2.62e-10 | 315 |
lateral plate mesoderm | 6.93e-08 | 203 |
trunk | 1.37e-07 | 199 |
splanchnic layer of lateral plate mesoderm | 1.42e-07 | 83 |
renal system | 1.45e-07 | 48 |
vessel | 1.47e-07 | 68 |
epithelial tube open at both ends | 1.63e-07 | 59 |
blood vessel | 1.63e-07 | 59 |
blood vasculature | 1.63e-07 | 59 |
vascular cord | 1.63e-07 | 59 |
urinary system structure | 4.45e-07 | 47 |
epithelial tube | 5.33e-07 | 117 |
artery | 6.70e-07 | 42 |
arterial blood vessel | 6.70e-07 | 42 |
arterial system | 6.70e-07 | 42 |