FFCP PHASE1:Hg19::chr17:78865226..78865237,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:78865226..78865237,+ | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr17:78865226..78865237,+ | |||
|id=chr17:78865226..78865237,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;3.98e-15;3!CL:0000306;1.40e-11;4!CL:0002222;1.40e-11;4!CL:0002224;1.40e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.54e-15,3;CL:0000306,1.26e-11,4;CL:0002222,1.26e-11,4;CL:0002224,1.26e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;3.52e-22;2!DOID:0060085;9.10e-12;1!DOID:3165;9.10e-12;1!DOID:0060121;9.10e-12;1!DOID:2438;9.10e-12;1!DOID:4418;9.10e-12;1!DOID:3347;9.10e-12;1!DOID:3908;1.91e-09;5!DOID:201;7.07e-08;6!DOID:0060100;7.07e-08;6!DOID:1325;5.50e-07;7!DOID:3904;5.50e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,7.44e-22,2;DOID:3347,6.26e-12,1;DOID:0060085,9.61e-12,1;DOID:3165,9.61e-12,1;DOID:0060121,9.61e-12,1;DOID:2438,9.61e-12,1;DOID:4418,9.61e-12,1;DOID:3908,2.57e-09,5;DOID:201,6.38e-08,6;DOID:0060100,6.38e-08,6;DOID:1325,6.78e-07,7;DOID:3904,6.78e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.52e-22;2!UBERON:0002173;3.52e-22;2!UBERON:0002186;3.52e-22;2!UBERON:0004821;3.98e-15;3!UBERON:0007499;3.98e-15;3!UBERON:0003215;3.98e-15;3!UBERON:0010368;3.98e-15;3!UBERON:0009911;3.98e-15;3!UBERON:0002299;3.98e-15;3!UBERON:0006524;3.98e-15;3!UBERON:0008874;3.98e-15;3!UBERON:0002169;3.98e-15;3!UBERON:0004894;3.98e-15;3!UBERON:0010077;1.40e-11;4!UBERON:0005389;1.40e-11;4!UBERON:0000484;1.40e-11;4!UBERON:0009856;1.40e-11;4!UBERON:0000965;1.40e-11;4!UBERON:0001803;1.40e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,7.44e-22,2;UBERON:0002173,7.44e-22,2;UBERON:0002186,7.44e-22,2;UBERON:0004821,6.54e-15,3;UBERON:0003215,6.54e-15,3;UBERON:0010368,6.54e-15,3;UBERON:0009911,6.54e-15,3;UBERON:0002299,6.54e-15,3;UBERON:0006524,6.54e-15,3;UBERON:0008874,6.54e-15,3;UBERON:0002169,6.54e-15,3;UBERON:0004894,6.54e-15,3;UBERON:0010077,1.26e-11,4;UBERON:0005389,1.26e-11,4;UBERON:0000484,1.26e-11,4;UBERON:0002546,1.26e-11,4;UBERON:0000965,1.26e-11,4;UBERON:0001803,1.26e-11,4;UBERON:0003073,1.26e-11,4;UBERON:0005426,1.26e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0.612002073732759,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0.383829398097213,0,0,0,0.369754010166788,0,0,0,1.10799081706375,0.401088894940283,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0.573673241497627,0,0,2.1349799145941,0.24666754841716,0,0,0,0,0,0.234321431833797,0.312160076830321,0,0,0,0.485618833104395,1.12360645361799,0.204154171254893,0.245668634623536,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,2.88662684050547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0.771048469013278,0.355123450626254,0.9033987161519,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0.551346289938122,0.107420244868274,0,0.170453254832202,0,0,0,0.255225424989168,0,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0.78494864019923,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0,0,0,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,2.55722532125772,0.23874448473769,0,0,0,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0,0,0,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0.455173793141999,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0,0,0,0.167821586975843,1.89753732724185,0,0.210998064528027,0.163232808159148,0,0,0,0,0,2.96521128680622,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,0,0,15.0323419414493,0,0,0,0,1.19472429772959,0.284609546029793,0,0,0,0.69647365264322,0,0.51595809741485,0,0,0,0.0969890164884194,0,0.225980740780532,0.685209623233754,1.19228767021794,0.0633107959558787,0,0.400794101257669,0,0.19980960958213,0,0,0,0,0.745515213392595,0,1.08723364858891,0.313808538937,0.203996435272644,0.577901179803038,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,0.339936274560377,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.874862855734746,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,1.21543982470953,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0,0.106691729694141,0,0.567515953566836,0.184105950251841,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,1.1796972334774,0.183428598521679,0,0,1.3807198521202,0,0.150420656698515,0.20170506870352,0,0,0.49131575253029,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0.894336993477167,0,0,0,0.227662191351298,0,0,0.342976018874837,0,0,0.118193840883968,0.333694205676207,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.447421727191169,0,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0.33639558774184,0,0,0,0,0.0673520530145875,0,0,0.976839223331694,0,1.9307228228694,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr17:78865226..78865237,+ | |||
}} |
Latest revision as of 22:34, 25 July 2015
Short description: | p@chr17:78865226..78865237, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:78865226..78865237, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.54e-15 | 3 |
crystallin accumulating cell | 1.26e-11 | 4 |
vertebrate lens cell | 1.26e-11 | 4 |
lens epithelial cell | 1.26e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 7.44e-22 | 2 |
alveolar duct | 7.44e-22 | 2 |
bronchiole | 7.44e-22 | 2 |
pulmonary alveolus epithelium | 6.54e-15 | 3 |
alveolus | 6.54e-15 | 3 |
pulmonary lobule | 6.54e-15 | 3 |
lobule | 6.54e-15 | 3 |
alveolus of lung | 6.54e-15 | 3 |
alveolar system | 6.54e-15 | 3 |
pulmonary acinus | 6.54e-15 | 3 |
alveolar sac | 6.54e-15 | 3 |
alveolar wall | 6.54e-15 | 3 |
cuboidal epithelium | 1.26e-11 | 4 |
transparent eye structure | 1.26e-11 | 4 |
simple cuboidal epithelium | 1.26e-11 | 4 |
cranial placode | 1.26e-11 | 4 |
lens of camera-type eye | 1.26e-11 | 4 |
epithelium of lens | 1.26e-11 | 4 |
lens placode | 1.26e-11 | 4 |
lens vesicle | 1.26e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 7.44e-22 | 2 |
osteosarcoma | 6.26e-12 | 1 |
organ system benign neoplasm | 9.61e-12 | 1 |
skin benign neoplasm | 9.61e-12 | 1 |
integumentary system benign neoplasm | 9.61e-12 | 1 |
dermis tumor | 9.61e-12 | 1 |
cutaneous fibrous histiocytoma | 9.61e-12 | 1 |
non-small cell lung carcinoma | 2.57e-09 | 5 |
connective tissue cancer | 6.38e-08 | 6 |
musculoskeletal system cancer | 6.38e-08 | 6 |
bronchus cancer | 6.78e-07 | 7 |
bronchogenic carcinoma | 6.78e-07 | 7 |