FFCP PHASE1:Hg19::chr17:7750864..7750874,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002gix.2_5end | |||
|cluster_id=chr17:7750864..7750874,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_20_at_KDM6B_5end | |||
|id=chr17:7750864..7750874,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.56e-30!42;CL:0000860!1.81e-29!45;CL:0000766!6.55e-24!76;CL:0000839!6.15e-22!70;CL:0000557!1.78e-21!71;CL:0002194!2.35e-19!63;CL:0000576!2.35e-19!63;CL:0000040!2.35e-19!63;CL:0000559!2.35e-19!63;CL:0002009!1.82e-18!65;CL:0002031!3.47e-15!124;CL:0000738!9.63e-15!140;CL:0000763!1.82e-13!112;CL:0000049!1.82e-13!112;CL:0002087!1.22e-12!119;CL:0002032!2.97e-11!165;CL:0000837!2.97e-11!165;CL:0000037!2.79e-10!172;CL:0000566!2.79e-10!172;CL:0000988!1.33e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.91e-48;33!CL:0002057;9.91e-48;33!CL:0000473;3.66e-39;39!CL:0000234;3.66e-39;39!CL:0000576;1.78e-21;48!CL:0000766;1.19e-14;69!CL:0000763;7.56e-11;100!CL:0000738;7.75e-08;136!CL:0002087;3.70e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.31e-42,48;CL:0000234,4.31e-42,48;CL:0000860,4.88e-42,42;CL:0002057,4.88e-42,42;CL:0000766,4.02e-35,72;CL:0000839,7.16e-34,66;CL:0000557,2.44e-33,67;CL:0002194,3.17e-33,59;CL:0000576,3.17e-33,59;CL:0000040,3.17e-33,59;CL:0000559,3.17e-33,59;CL:0002009,4.43e-32,61;CL:0000763,1.11e-22,108;CL:0000049,1.11e-22,108;CL:0002031,1.18e-17,120;CL:0000738,1.64e-17,136;CL:0002087,4.68e-16,115;CL:0002032,2.14e-14,161;CL:0000837,2.14e-14,161;CL:0000037,1.09e-13,168;CL:0000988,7.36e-13,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.09e-29;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.74e-18!102;UBERON:0003061!5.74e-18!102;UBERON:0002371!7.46e-18!80;UBERON:0001474!6.88e-17!86;UBERON:0002193!2.77e-15!112;UBERON:0004765!9.80e-14!101;UBERON:0001434!9.80e-14!101;UBERON:0002405!3.18e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-29,76;UBERON:0002390,1.86e-28,98;UBERON:0003061,1.86e-28,98;UBERON:0001474,7.08e-27,82;UBERON:0002193,1.32e-25,108;UBERON:0004765,2.68e-24,90;UBERON:0002405,1.92e-23,93;UBERON:0001434,1.20e-21,100;UBERON:0003081,4.81e-14,203;UBERON:0002204,5.33e-12,167;UBERON:0000926,5.15e-08,315;UBERON:0004120,5.15e-08,315;UBERON:0006603,5.15e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0.157421562627358,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,1.85943229524548,0.822335776043652,0.929119112685311,1.43846196161075,2.0492856522328,0.709446689665756,0,3.87290810150296,2.70852973188684,0.188242339542605,0.818718450173537,0.224723484445085,3.36692281607993,3.53021929783703,1.27867425159808,0.329851300186716,0.199463657621632,0,2.32167390902867,2.26954089876456,4.35975574296902,1.00499466102697,1.0429658368404,0.434377689410233,0,1.47311054395026,0.632924774881769,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370353780634118,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6331618947972,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0.167516265334349,0,2.99602809578873,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,1.29694662238543,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0.471353094203252,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0.258355639344024,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@KDM6B | |||
}} |
Latest revision as of 01:48, 18 September 2015
Short description: | p20@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.31e-42 | 48 |
phagocyte | 4.31e-42 | 48 |
classical monocyte | 4.88e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-42 | 42 |
myeloid leukocyte | 4.02e-35 | 72 |
myeloid lineage restricted progenitor cell | 7.16e-34 | 66 |
granulocyte monocyte progenitor cell | 2.44e-33 | 67 |
monopoietic cell | 3.17e-33 | 59 |
monocyte | 3.17e-33 | 59 |
monoblast | 3.17e-33 | 59 |
promonocyte | 3.17e-33 | 59 |
macrophage dendritic cell progenitor | 4.43e-32 | 61 |
myeloid cell | 1.11e-22 | 108 |
common myeloid progenitor | 1.11e-22 | 108 |
hematopoietic lineage restricted progenitor cell | 1.18e-17 | 120 |
leukocyte | 1.64e-17 | 136 |
nongranular leukocyte | 4.68e-16 | 115 |
hematopoietic oligopotent progenitor cell | 2.14e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-14 | 161 |
hematopoietic stem cell | 1.09e-13 | 168 |
hematopoietic cell | 7.36e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.68e-29 | 76 |
hematopoietic system | 1.86e-28 | 98 |
blood island | 1.86e-28 | 98 |
bone element | 7.08e-27 | 82 |
hemolymphoid system | 1.32e-25 | 108 |
skeletal element | 2.68e-24 | 90 |
immune system | 1.92e-23 | 93 |
skeletal system | 1.20e-21 | 100 |
lateral plate mesoderm | 4.81e-14 | 203 |
musculoskeletal system | 5.33e-12 | 167 |
mesoderm | 5.15e-08 | 315 |
mesoderm-derived structure | 5.15e-08 | 315 |
presumptive mesoderm | 5.15e-08 | 315 |