FFCP PHASE1:Hg19::chr17:7750678..7750709,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29012 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-154bp_to_uc002gix.2_5end | |||
|cluster_id=chr17:7750678..7750709,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_4_at_KDM6B_5end | |||
|id=chr17:7750678..7750709,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.03e-19!42;CL:0000860!3.48e-19!45;CL:0000766!9.50e-17!76;CL:0000557!4.72e-15!71;CL:0000839!1.96e-14!70;CL:0000738!3.96e-14!140;CL:0002009!1.29e-13!65;CL:0002194!1.85e-13!63;CL:0000576!1.85e-13!63;CL:0000040!1.85e-13!63;CL:0000559!1.85e-13!63;CL:0002031!8.78e-12!124;CL:0002087!1.92e-11!119;CL:0000763!7.15e-10!112;CL:0000049!7.15e-10!112;CL:0000037!2.99e-09!172;CL:0000566!2.99e-09!172;CL:0002032!4.50e-09!165;CL:0000837!4.50e-09!165;CL:0000988!1.16e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.75e-92;33!CL:0002057;7.75e-92;33!CL:0000473;7.94e-65;39!CL:0000234;7.94e-65;39!CL:0000576;8.20e-42;48!CL:0000766;2.08e-34;69!CL:0000763;2.28e-15;100!CL:0002087;4.45e-11;104!CL:0000738;1.83e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.35e-82,42;CL:0002057,3.35e-82,42;CL:0000473,3.15e-76,48;CL:0000234,3.15e-76,48;CL:0000766,2.14e-66,72;CL:0000557,2.53e-63,67;CL:0002009,1.96e-61,61;CL:0000839,2.11e-60,66;CL:0002194,1.46e-59,59;CL:0000576,1.46e-59,59;CL:0000040,1.46e-59,59;CL:0000559,1.46e-59,59;CL:0000763,1.63e-44,108;CL:0000049,1.63e-44,108;CL:0000738,8.99e-34,136;CL:0002031,2.97e-32,120;CL:0002087,2.27e-27,115;CL:0002032,2.56e-27,161;CL:0000837,2.56e-27,161;CL:0000037,7.48e-26,168;CL:0000988,3.88e-24,177;CL:0000134,2.18e-10,354;CL:0002320,5.05e-10,361;CL:0000219,1.68e-09,386;CL:0000723,2.51e-08,433;CL:0000034,5.11e-08,441;CL:0000048,7.37e-08,427;CL:0000775,8.76e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.54e-60;42!CL:0000049;1.99e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.61e-13!102;UBERON:0003061!2.61e-13!102;UBERON:0002193!1.14e-11!112;UBERON:0001474!1.80e-11!86;UBERON:0002371!1.88e-11!80;UBERON:0004765!7.07e-10!101;UBERON:0001434!7.07e-10!101;UBERON:0002405!5.26e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.92e-55,76;UBERON:0001474,9.57e-54,82;UBERON:0004765,2.44e-48,90;UBERON:0002405,1.05e-43,93;UBERON:0001434,8.72e-43,100;UBERON:0002390,4.10e-41,98;UBERON:0003061,4.10e-41,98;UBERON:0002193,1.21e-36,108;UBERON:0002204,1.26e-22,167;UBERON:0003081,1.49e-18,203;UBERON:0000926,5.18e-10,315;UBERON:0004120,5.18e-10,315;UBERON:0006603,5.18e-10,315;UBERON:0002384,1.58e-09,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.382067028739756,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.284338464974843,0,0,1.20326668482085,0,0.223915474239924,0.32389366601898,0.515151135268373,1.59938062657521,1.88937971844405,0.970336244751265,4.18372266430232,7.40102198439286,4.64559556342655,6.61692502340946,4.86705342405291,2.36482229888585,4.13694816883942,5.80936215225443,1.35426486594342,4.32957380947991,3.547779950752,1.57306439111559,10.1007684482398,7.70229664982625,10.8687311385837,0.989553900560148,2.79249120670285,2.55734850319616,8.9964863974861,14.7520158419696,8.71951148593805,4.27122730936464,4.69334626578181,2.38907729175628,2.42159801053347,5.15588690382591,2.84816148696796,0,0,0,0.112328631146495,0,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0.393010762749165,0.616804496998528,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.802320587350522,0.434473211648397,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.573673241497627,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0.272746120590835,0,0,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,101.488627006564,0,0.414656231081544,0.576479813667846,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,1.91381625495949,0.749007023947182,2.99161459204025,2.90090859405225,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0.862856803274467,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0.519254429183621,0,0,0.200506470303285,0.368323955743585,0,0.182091168006717,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0,0,0,0.443430153536676,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0.245040215981032,0,0.144269212976445,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0.994147647766298,0,0,0,0,0,0.552567831062295,0.251932747854276,0.20453736500431,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0,0,1.04171104434093,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0.331737779793674,0.295547618953547,0,0,0.278847488557207,0.153900517007594,0.113942055847001,0,0.269272933229316,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.208843899010911,0.067401132980677,0,0,0.364909578431332,0.19566461893209,0.242780379534093,0,1.20990716048664,0.61214552326098,0,1.35291077473043,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0.0969890164884194,0.264768380074501,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0.171594997861965,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0,0.13480708770837,0.196854963029498,0,0.795229689809303,0.272406812223151,0.160753148465019,0.412618309791701,0,1.349843349309,0,0,0,0.236417121897595,0.209818352539992,0.211200673038813,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0.628817220398664,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0.157054096250234,0,0.366078794705889,0.1251909307065,0,0,0.0620964029413835,0,0,0.303298235083296,0,0.470531639396343,1.40500471742064,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p4@KDM6B | |||
}} |
Latest revision as of 01:47, 18 September 2015
Short description: | p4@KDM6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KDM6B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -154bp_to_uc002gix.2_5end |
EntrezGene: | KDM6B |
HGNC: | 29012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.35e-82 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.35e-82 | 42 |
defensive cell | 3.15e-76 | 48 |
phagocyte | 3.15e-76 | 48 |
myeloid leukocyte | 2.14e-66 | 72 |
granulocyte monocyte progenitor cell | 2.53e-63 | 67 |
macrophage dendritic cell progenitor | 1.96e-61 | 61 |
myeloid lineage restricted progenitor cell | 2.11e-60 | 66 |
monopoietic cell | 1.46e-59 | 59 |
monocyte | 1.46e-59 | 59 |
monoblast | 1.46e-59 | 59 |
promonocyte | 1.46e-59 | 59 |
myeloid cell | 1.63e-44 | 108 |
common myeloid progenitor | 1.63e-44 | 108 |
leukocyte | 8.99e-34 | 136 |
hematopoietic lineage restricted progenitor cell | 2.97e-32 | 120 |
nongranular leukocyte | 2.27e-27 | 115 |
hematopoietic oligopotent progenitor cell | 2.56e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-27 | 161 |
hematopoietic stem cell | 7.48e-26 | 168 |
hematopoietic cell | 3.88e-24 | 177 |
mesenchymal cell | 2.18e-10 | 354 |
connective tissue cell | 5.05e-10 | 361 |
motile cell | 1.68e-09 | 386 |
somatic stem cell | 2.51e-08 | 433 |
stem cell | 5.11e-08 | 441 |
multi fate stem cell | 7.37e-08 | 427 |
neutrophil | 8.76e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.92e-55 | 76 |
bone element | 9.57e-54 | 82 |
skeletal element | 2.44e-48 | 90 |
immune system | 1.05e-43 | 93 |
skeletal system | 8.72e-43 | 100 |
hematopoietic system | 4.10e-41 | 98 |
blood island | 4.10e-41 | 98 |
hemolymphoid system | 1.21e-36 | 108 |
musculoskeletal system | 1.26e-22 | 167 |
lateral plate mesoderm | 1.49e-18 | 203 |
mesoderm | 5.18e-10 | 315 |
mesoderm-derived structure | 5.18e-10 | 315 |
presumptive mesoderm | 5.18e-10 | 315 |
connective tissue | 1.58e-09 | 371 |