FFCP PHASE1:Hg19::chr17:77020171..77020195,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14324 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXJ1 | |||
|association_with_transcript=-55bp_to_ENST00000311661,ENST00000339142,NM_030968,NM_198594,uc002jwp.2,uc002jwq.2_5end | |||
|cluster_id=chr17:77020171..77020195,+ | |||
|coexpression_cluster_id=C3694 | |||
|description=CAGE_peak_3_at_C1QTNF1_5end | |||
|id=chr17:77020171..77020195,+ | |||
|ontology_enrichment_celltype=CL:0000680!3.44e-24!57;CL:0000056!3.44e-24!57;CL:0000355!3.44e-24!57;CL:0000055!1.56e-23!180;CL:0000187!2.54e-23!54;CL:0000393!6.57e-22!60;CL:0000211!6.57e-22!60;CL:0000183!1.10e-21!59;CL:0000192!9.71e-20!42;CL:0000514!9.71e-20!42;CL:0000359!2.36e-17!32;CL:0002494!7.57e-12!16;CL:0000222!1.38e-10!119;CL:0000057!3.90e-08!75;CL:0000220!4.91e-08!246;CL:0002321!8.84e-08!248;CL:0002539!2.20e-07!10;CL:0000136!3.00e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.66e-20;32!CL:0000192;7.30e-17;43!CL:0000187;2.94e-15;55!CL:0002494;8.55e-15;16!CL:0000393;3.40e-12;61!CL:0000211;3.40e-12;61!CL:0002539;3.95e-09;10!CL:0000136;1.56e-08;13!CL:0000134;4.86e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.21e-29,58;CL:0000056,6.21e-29,58;CL:0000355,6.21e-29,58;CL:0000187,8.51e-28,55;CL:0000393,1.27e-25,61;CL:0000211,1.27e-25,61;CL:0000192,1.86e-23,43;CL:0000514,1.86e-23,43;CL:0000359,3.78e-21,32;CL:0002494,7.88e-15,16;CL:0000222,3.51e-13,121;CL:0002539,4.44e-09,10;CL:0000723,4.91e-09,433;CL:0000136,6.64e-09,15;CL:0000048,1.26e-08,427;CL:0000034,4.20e-08,441;CL:0000057,2.95e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;7.30e-17;43!CL:0000355;2.01e-15;58 | |||
|ontology_enrichment_disease=DOID:2394!1.52e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.06e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.26e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.42e-27!83;UBERON:0002329!8.42e-27!83;UBERON:0003077!8.42e-27!83;UBERON:0003059!8.42e-27!83;UBERON:0007282!8.42e-27!83;UBERON:0009618!8.42e-27!83;UBERON:0007285!8.42e-27!83;UBERON:0000486!8.05e-26!82;UBERON:0004290!3.67e-25!70;UBERON:0001134!9.51e-24!61;UBERON:0002036!9.51e-24!61;UBERON:0003082!9.51e-24!61;UBERON:0002385!1.12e-23!63;UBERON:0001015!1.12e-23!63;UBERON:0000383!1.12e-23!63;UBERON:0000481!2.02e-23!347;UBERON:0005256!6.92e-21!143;UBERON:0000119!1.89e-18!312;UBERON:0001009!2.97e-18!113;UBERON:0000475!4.62e-18!365;UBERON:0004872!5.84e-18!84;UBERON:0000483!9.52e-18!309;UBERON:0007100!5.23e-17!27;UBERON:0000468!7.27e-17!659;UBERON:0004535!8.52e-17!110;UBERON:0002100!9.47e-17!216;UBERON:0000477!2.03e-16!286;UBERON:0003104!3.35e-15!238;UBERON:0009142!3.35e-15!238;UBERON:0000948!3.43e-15!24;UBERON:0005498!3.43e-15!24;UBERON:0004140!3.43e-15!24;UBERON:0009881!3.43e-15!24;UBERON:0004141!3.43e-15!24;UBERON:0003084!3.43e-15!24;UBERON:0007005!3.43e-15!24;UBERON:0004139!3.43e-15!24;UBERON:0004291!3.43e-15!24;UBERON:0002049!3.60e-15!79;UBERON:0007798!3.60e-15!79;UBERON:0000923!6.89e-14!604;UBERON:0005291!6.89e-14!604;UBERON:0006598!6.89e-14!604;UBERON:0002532!6.89e-14!604;UBERON:0000467!1.02e-13!625;UBERON:0002050!1.14e-13!605;UBERON:0005423!1.14e-13!605;UBERON:0000480!1.69e-13!626;UBERON:0003914!4.02e-13!118;UBERON:0000922!4.96e-13!612;UBERON:0000055!2.57e-12!69;UBERON:0004111!2.68e-12!241;UBERON:0004573!1.24e-11!33;UBERON:0004571!1.24e-11!33;UBERON:0003103!2.22e-11!69;UBERON:0001637!2.83e-11!42;UBERON:0003509!2.83e-11!42;UBERON:0004572!2.83e-11!42;UBERON:0001981!4.25e-11!60;UBERON:0007500!4.25e-11!60;UBERON:0004537!4.25e-11!60;UBERON:0006965!4.25e-11!60;UBERON:0000490!6.57e-11!138;UBERON:0001048!4.69e-10!168;UBERON:0000025!1.31e-08!194;UBERON:0000926!6.89e-08!448;UBERON:0004120!6.89e-08!448;UBERON:0006603!6.89e-08!448;UBERON:0001135!1.17e-07!15;UBERON:0004237!2.20e-07!10;UBERON:0004695!2.20e-07!10;UBERON:0002111!2.20e-07!10;UBERON:0004178!2.20e-07!10;UBERON:0004458!6.34e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.43e-19;25!UBERON:0000948;1.34e-16;22!UBERON:0004573;1.82e-12;33!UBERON:0004571;1.82e-12;33!UBERON:0002385;1.29e-10;31!UBERON:0001015;1.29e-10;31!UBERON:0000383;1.29e-10;31!UBERON:0001637;7.93e-10;42!UBERON:0003509;7.93e-10;42!UBERON:0004572;7.93e-10;42!UBERON:0004237;3.95e-09;10!UBERON:0004695;3.95e-09;10!UBERON:0002111;3.95e-09;10!UBERON:0004178;3.95e-09;10!UBERON:0001135;8.40e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.91e-29,71;UBERON:0003059,1.91e-29,71;UBERON:0007282,1.91e-29,71;UBERON:0004290,1.91e-29,71;UBERON:0009618,1.91e-29,71;UBERON:0001134,9.17e-29,62;UBERON:0002036,9.17e-29,62;UBERON:0003082,9.17e-29,62;UBERON:0003077,1.11e-28,72;UBERON:0007285,1.11e-28,72;UBERON:0000486,1.66e-28,83;UBERON:0002385,4.69e-28,64;UBERON:0001015,4.69e-28,64;UBERON:0000383,4.69e-28,64;UBERON:0007524,6.14e-28,73;UBERON:0007503,1.24e-26,78;UBERON:0005256,1.58e-23,122;UBERON:0004872,5.14e-22,83;UBERON:0003104,1.91e-21,160;UBERON:0009142,1.91e-21,160;UBERON:0001009,4.15e-21,112;UBERON:0007100,1.81e-20,27;UBERON:0004535,2.73e-19,109;UBERON:0000948,3.98e-18,24;UBERON:0005498,3.98e-18,24;UBERON:0004140,3.98e-18,24;UBERON:0009881,3.98e-18,24;UBERON:0004141,3.98e-18,24;UBERON:0003084,3.98e-18,24;UBERON:0007005,3.98e-18,24;UBERON:0004139,3.98e-18,24;UBERON:0004291,3.98e-18,24;UBERON:0002049,1.14e-15,78;UBERON:0007798,1.14e-15,78;UBERON:0002100,1.28e-15,199;UBERON:0003914,1.42e-15,117;UBERON:0001637,1.91e-14,42;UBERON:0003509,1.91e-14,42;UBERON:0004572,1.91e-14,42;UBERON:0004573,4.23e-14,33;UBERON:0004571,4.23e-14,33;UBERON:0000055,1.52e-13,68;UBERON:0000490,2.07e-13,148;UBERON:0007500,7.36e-13,59;UBERON:0001981,7.36e-13,59;UBERON:0004537,7.36e-13,59;UBERON:0006965,7.36e-13,59;UBERON:0000926,3.21e-12,315;UBERON:0004120,3.21e-12,315;UBERON:0006603,3.21e-12,315;UBERON:0000119,1.43e-11,309;UBERON:0000483,6.21e-11,306;UBERON:0003103,1.94e-09,68;UBERON:0004237,4.44e-09,10;UBERON:0004695,4.44e-09,10;UBERON:0002111,4.44e-09,10;UBERON:0004178,4.44e-09,10;UBERON:0001135,9.82e-09,15;UBERON:0004111,3.69e-08,240;UBERON:0002204,3.98e-08,167;UBERON:0004458,1.18e-07,49;UBERON:0002323,1.57e-07,46 | |||
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| |||
|short_description=p3@C1QTNF1 | |||
}} |
Latest revision as of 23:52, 17 September 2015
Short description: | p3@C1QTNF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1QTNF1_5end |
Coexpression cluster: | C3694_Cardiac_Smooth_Mesenchymal_mesenchymal_Hair_heart_Fibroblast |
Association with transcript: | -55bp_to_ENST00000311661, ENST00000339142, NM_030968, NM_198594, uc002jwp.2, uc002jwq.2_5end |
EntrezGene: | C1QTNF1 |
HGNC: | 14324 |
UniProt: | Q9BXJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.21e-29 | 58 |
myoblast | 6.21e-29 | 58 |
multi-potent skeletal muscle stem cell | 6.21e-29 | 58 |
muscle cell | 8.51e-28 | 55 |
electrically responsive cell | 1.27e-25 | 61 |
electrically active cell | 1.27e-25 | 61 |
smooth muscle cell | 1.86e-23 | 43 |
smooth muscle myoblast | 1.86e-23 | 43 |
vascular associated smooth muscle cell | 3.78e-21 | 32 |
cardiocyte | 7.88e-15 | 16 |
mesodermal cell | 3.51e-13 | 121 |
aortic smooth muscle cell | 4.44e-09 | 10 |
somatic stem cell | 4.91e-09 | 433 |
fat cell | 6.64e-09 | 15 |
multi fate stem cell | 1.26e-08 | 427 |
stem cell | 4.20e-08 | 441 |
fibroblast | 2.95e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.26e-09 | 14 |