FFCP PHASE1:Hg19::chr17:76355747..76355749,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9021 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19391 | |||
|TSSclassifier=strong | |||
|UniProt=O14543 | |||
|association_with_transcript=-465bp_to_AB004904_5end | |||
|cluster_id=chr17:76355747..76355749,- | |||
|description=CAGE_peak_10_at_SOCS3_5end | |||
|id=chr17:76355747..76355749,- | |||
|ontology_enrichment_celltype=CL:0002057!3.90e-15!42;CL:0000860!1.72e-14!45;CL:0002009!2.16e-09!65;CL:0000557!2.15e-08!71;CL:0002194!3.48e-08!63;CL:0000576!3.48e-08!63;CL:0000040!3.48e-08!63;CL:0000559!3.48e-08!63;CL:0000839!4.57e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.96e-39;33!CL:0002057;3.96e-39;33!CL:0000473;2.68e-27;39!CL:0000234;2.68e-27;39!CL:0000576;3.86e-18;48!CL:0002575;1.04e-13;2!CL:0000766;5.49e-10;69!CL:0000511;1.07e-07;1!CL:0002625;1.07e-07;1!CL:0000222;1.07e-07;1!CL:0000216;1.07e-07;1!CL:0000313;1.07e-07;1!CL:0000669;2.75e-07;4!CL:0000763;8.09e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.06e-32,42;CL:0002057,3.06e-32,42;CL:0000473,7.79e-28,48;CL:0000234,7.79e-28,48;CL:0002009,6.60e-24,61;CL:0002194,1.15e-21,59;CL:0000576,1.15e-21,59;CL:0000040,1.15e-21,59;CL:0000559,1.15e-21,59;CL:0000557,1.64e-21,67;CL:0000839,4.38e-19,66;CL:0000766,2.87e-17,72;CL:0002575,9.17e-14,2;CL:0000763,3.35e-12,108;CL:0000049,3.35e-12,108;CL:0002031,1.13e-10,120;CL:0002087,9.33e-10,115;CL:0000738,4.69e-09,136;CL:0000988,2.80e-08,177;CL:0000511,6.97e-08,1;CL:0002625,6.97e-08,1;CL:0000216,6.97e-08,1;CL:0000313,1.99e-07,1;CL:0000669,2.58e-07,4;CL:0002032,3.57e-07,161;CL:0000837,3.57e-07,161;CL:0000037,9.51e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;5.16e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;1.07e-07;1!DOID:2152;1.07e-07;1!DOID:5662;1.07e-07;1!DOID:3603;1.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.72e-08,1;DOID:3111,1.18e-07,1;DOID:3603,1.18e-07,1;DOID:2152,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.24e-10!86;UBERON:0004765!1.58e-09!101;UBERON:0001434!1.58e-09!101;UBERON:0002371!2.17e-08!80;UBERON:0002204!1.96e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;1.04e-13;2!UBERON:0001136;1.07e-07;1!UBERON:0001343;1.07e-07;1!UBERON:0004911;1.07e-07;1!UBERON:0004910;1.07e-07;1!UBERON:0004813;1.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.29e-18,76;UBERON:0001474,4.89e-17,82;UBERON:0004765,2.97e-15,90;UBERON:0002405,1.15e-14,93;UBERON:0002390,9.25e-14,98;UBERON:0003061,9.25e-14,98;UBERON:0004909,1.27e-13,2;UBERON:0001434,2.01e-13,100;UBERON:0002193,3.35e-12,108;UBERON:0001136,6.97e-08,1;UBERON:0001343,6.97e-08,1;UBERON:0004910,6.97e-08,1;UBERON:0005154,6.97e-08,1;UBERON:0005295,6.97e-08,1;UBERON:0004813,6.97e-08,1;UBERON:0005297,6.97e-08,1;UBERON:0005294,6.97e-08,1;UBERON:0010141,6.97e-08,1;UBERON:0005891,6.97e-08,1;UBERON:0002204,7.44e-08,167;UBERON:0004911,1.99e-07,1;UBERON:0003081,8.60e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.662794751455832,0,0,0.730310090387373,0,0.492484232307152,0.408001382488506,1.25381888591235,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0.929119112685311,2.3015391385772,1.0246428261164,1.6553756092201,2.75796544589295,0,2.70852973188684,0.376484679085209,0,0.674170453335254,5.81559395504715,0.641858054152187,1.27867425159808,0.989553900560148,1.39624560335142,1.27867425159808,2.03146467040009,2.26954089876456,0.622822248995575,2.76373531782418,3.65038042894141,0.65156653411535,2.42159801053347,0.736555271975129,1.26584954976354,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0.302714855289863,1.15235184896,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0,1.95801157462741,1.02943027143257,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.629078458031288,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.461701551022782,0.683652335082007,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0.661983911750998,0,0,0.284609546029793,0,0.520679215005393,0.391969589657511,0.174118413160805,0,0.343972064943233,0,0.146178634172371,0,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0.144090417154106,0,0,0.14405479798815,0,0,1.08723364858891,0.313808538937,1.73396969981747,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.674921674654501,1.5476039091159,0,0,0.0788057072991982,0.0524545881349981,0.211200673038813,4.30289614398828,0.959575986597226,0,0,0,0,0,0,0,0,0,0.453248366080503,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,2.28372266835974,0,0,0,0,0.467426619694449,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0.604923695052956,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,1.26184898228651,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,1.26787274015176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.346576998451015,0.381382095467167,0.690359926060101,0.596748666348824,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,1.37190407549935,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,1.00669888618013,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0,0,0,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.33639558774184,0.12729431655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| |||
|short_description=p10@SOCS3 | |||
}} |
Latest revision as of 21:26, 17 September 2015
Short description: | p10@SOCS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SOCS3_5end |
Coexpression cluster: | NA |
Association with transcript: | -465bp_to_AB004904_5end |
EntrezGene: | SOCS3 |
HGNC: | 19391 |
UniProt: | O14543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.06e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.06e-32 | 42 |
defensive cell | 7.79e-28 | 48 |
phagocyte | 7.79e-28 | 48 |
macrophage dendritic cell progenitor | 6.60e-24 | 61 |
monopoietic cell | 1.15e-21 | 59 |
monocyte | 1.15e-21 | 59 |
monoblast | 1.15e-21 | 59 |
promonocyte | 1.15e-21 | 59 |
granulocyte monocyte progenitor cell | 1.64e-21 | 67 |
myeloid lineage restricted progenitor cell | 4.38e-19 | 66 |
myeloid leukocyte | 2.87e-17 | 72 |
central nervous system pericyte | 9.17e-14 | 2 |
myeloid cell | 3.35e-12 | 108 |
common myeloid progenitor | 3.35e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 1.13e-10 | 120 |
nongranular leukocyte | 9.33e-10 | 115 |
leukocyte | 4.69e-09 | 136 |
hematopoietic cell | 2.80e-08 | 177 |
androgen binding protein secreting cell | 6.97e-08 | 1 |
seminiferous tubule epithelial cell | 6.97e-08 | 1 |
Sertoli cell | 6.97e-08 | 1 |
serous secreting cell | 1.99e-07 | 1 |
pericyte cell | 2.58e-07 | 4 |
hematopoietic oligopotent progenitor cell | 3.57e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.57e-07 | 161 |
hematopoietic stem cell | 9.51e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.29e-18 | 76 |
bone element | 4.89e-17 | 82 |
skeletal element | 2.97e-15 | 90 |
immune system | 1.15e-14 | 93 |
hematopoietic system | 9.25e-14 | 98 |
blood island | 9.25e-14 | 98 |
epithelium of gonad | 1.27e-13 | 2 |
skeletal system | 2.01e-13 | 100 |
hemolymphoid system | 3.35e-12 | 108 |
mesothelium | 6.97e-08 | 1 |
seminiferous tubule of testis | 6.97e-08 | 1 |
epithelium of male gonad | 6.97e-08 | 1 |
epithelial cord | 6.97e-08 | 1 |
sex cord | 6.97e-08 | 1 |
seminiferous tubule epithelium | 6.97e-08 | 1 |
testis sex cord | 6.97e-08 | 1 |
genital ridge | 6.97e-08 | 1 |
primitive sex cord of indifferent gonad | 6.97e-08 | 1 |
coelomic epithelium | 6.97e-08 | 1 |
musculoskeletal system | 7.44e-08 | 167 |
epithelium of female gonad | 1.99e-07 | 1 |
lateral plate mesoderm | 8.60e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.72e-08 | 1 |
cystadenocarcinoma | 1.18e-07 | 1 |
mucinous cystadenocarcinoma | 1.18e-07 | 1 |
ovary epithelial cancer | 1.99e-07 | 1 |