FFCP PHASE1:Hg19::chr17:74722015..74722058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19355 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-91bp_to_BC016837_5end | |||
|cluster_id=chr17:74722015..74722058,- | |||
|description=CAGE_peak_7_at_JMJD6_5end | |||
|id=chr17:74722015..74722058,- | |||
|ontology_enrichment_celltype=CL:0002057!6.29e-19!42;CL:0000738!1.80e-17!140;CL:0000860!3.78e-17!45;CL:0000037!1.16e-16!172;CL:0000566!1.16e-16!172;CL:0002032!1.54e-16!165;CL:0000837!1.54e-16!165;CL:0000988!5.44e-15!182;CL:0000766!9.48e-15!76;CL:0002031!8.53e-14!124;CL:0000763!1.06e-13!112;CL:0000049!1.06e-13!112;CL:0002087!2.73e-13!119;CL:0000839!3.22e-11!70;CL:0000557!6.38e-11!71;CL:0002009!1.23e-10!65;CL:0002194!1.24e-10!63;CL:0000576!1.24e-10!63;CL:0000040!1.24e-10!63;CL:0000559!1.24e-10!63;CL:0000134!2.33e-08!358;CL:0000048!3.51e-08!430;CL:0000723!9.50e-08!436;CL:0000034!1.16e-07!444;CL:0002320!1.47e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-17;33!CL:0002057;1.74e-17;33!CL:0000094;1.88e-13;8!CL:0000576;6.02e-12;48!CL:0000473;1.68e-11;39!CL:0000234;1.68e-11;39!CL:0000767;1.20e-09;3!CL:0000081;1.50e-09;11!CL:0000623;2.09e-09;3!CL:0000766;4.07e-08;69!CL:0002087;5.41e-08;104!CL:0000771;1.77e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.20e-22,136;CL:0000860,5.09e-21,42;CL:0002057,5.09e-21,42;CL:0000766,3.18e-19,72;CL:0000473,9.93e-18,48;CL:0000234,9.93e-18,48;CL:0000037,1.48e-17,168;CL:0002087,2.35e-17,115;CL:0000988,3.91e-16,177;CL:0002032,2.81e-15,161;CL:0000837,2.81e-15,161;CL:0002031,7.93e-14,120;CL:0000094,1.26e-13,8;CL:0002194,3.75e-13,59;CL:0000576,3.75e-13,59;CL:0000040,3.75e-13,59;CL:0000559,3.75e-13,59;CL:0002009,1.45e-12,61;CL:0000763,9.22e-12,108;CL:0000049,9.22e-12,108;CL:0000839,2.95e-11,66;CL:0000557,5.09e-11,67;CL:0000767,6.91e-10,3;CL:0000081,1.14e-09,11;CL:0000623,1.74e-09,3;CL:0000825,1.74e-09,3;CL:0000134,1.54e-07,354;CL:0000771,1.79e-07,2;CL:0002320,3.55e-07,361;CL:0000048,3.58e-07,427;CL:0000723,6.69e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.17e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.85e-12!86;UBERON:0004765!1.11e-10!101;UBERON:0001434!1.11e-10!101;UBERON:0002371!1.58e-10!80;UBERON:0002390!1.69e-09!102;UBERON:0003061!1.69e-09!102;UBERON:0002193!2.24e-08!112;UBERON:0002204!2.49e-08!167;UBERON:0002384!5.19e-08!375;UBERON:0002405!2.20e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.79e-10,98;UBERON:0003061,8.79e-10,98;UBERON:0002371,3.62e-09,76;UBERON:0002193,2.31e-08,108;UBERON:0001474,3.62e-08,82;UBERON:0002384,8.93e-08,371;UBERON:0002405,1.63e-07,93;UBERON:0004765,4.73e-07,90 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,0,0,0,2.53299878168311,1.26343974685366,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.629686250509434,3.93364276848904,4.22212337906934,1.70297735647684,0,0,0,0.0774672005803016,0.284338464974843,0,1.10799081706375,1.40381113229099,2.38711957787437,0,0,0,1.30858414901608,0.755751887377619,0.727752183563449,1.85943229524548,0.411167888021826,0.929119112685311,1.1507695692886,0.256160706529101,1.41889337933151,1.72372840368309,1.29096936716765,0,3.01187743268168,1.09162460023138,2.24723484445085,2.75475503133812,2.24650318953266,1.27867425159808,0.989553900560148,0.199463657621632,0,1.16083695451434,0.56738522469114,0.622822248995575,1.00499466102697,1.0429658368404,0.217188844705117,1.21079900526674,2.20966581592539,0.632924774881769,0.422510572623884,0.425208599930087,0.209658645508376,0.44931452458598,0.450530678524519,0.64290234678832,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0.560508562981536,0.263384084775077,0.393419540227666,0,0.822405995998037,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0.759059076058509,0,0,0,0,0,0,0,0,3.83052812126992,3.20928234940209,4.34473211648397,0,0,0.639312809217652,0,0,0,0,0,0,0,0,1.96468613246569,0,0,0,0,0.132957960518865,0.238490624305342,1.71598473234038,0,0,0,0.694281003215189,0.56530794192401,0,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,9.22462922052443,7.75560528296651,0,0.496971951695318,0.12663051166458,0.397227542439656,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,1.18800285728205,0,0,0,0,0,0.277064115484183,0.438977620880838,0.919463387397059,0.300476117813194,0.340296549480063,0,0,0.423863802319124,0.300091096084402,0.103052529238439,0.515281080091258,0,0.675105328965065,0.584622030967192,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.44024217006613,0.621984346622316,0.864719720501769,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,1.01346914667305,0,0.716243852959582,1.12085143993527,1.57624608161542,2.15627574859517,2.05348858047597,0,0,0,0.167516265334349,0,0.749007023947182,0,3.72973962092432,0.12269149171914,0,0,1.03985430765404,0.535286966391485,0.473107245101804,0,0,0,0,0,0,0.0868836144680828,0,0,0,1.72571360654893,1.60091336705167,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,0.512556597022804,1.02341449813341,0.482561763430822,0,0,0.355123450626254,0.0821271560138091,0,0,0,0.200506470303285,0.184161977871793,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.309123034943167,0.732555718546747,0.82509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0.178064071293475,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,1.73986598415015,0.37064843820784,0.429374660225974,0,0,0.190630193923825,0,0,0,1.56989728039846,0,1.09814811894422,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.243713489631284,1.05650146756755,0.272999822815972,0,0,0,0,0.876901770507525,0,0,0.608731130888112,0.30982349809975,0,0,0.196498082026242,1.426684205925,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.245040215981032,0,0.28853842595289,0.284567373393656,0.637705090915289,0,0.191505370132367,0.846694330895531,0.649243880549111,0,0,0.156679895773023,2.50634477090067,0.169291777801603,0,0,0.851692475380653,0,0,0.223676107892416,0.333698283423817,0,0.278406173895242,0,0.540911356951966,0,0,0.18714054040822,0.293016358543788,0.36408156524854,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,0,0.494411622680279,0.422250816255987,0.19924798825107,0,1.0077309914171,0.102268682502155,0.738508832766417,0.311039587661807,0,0,0,0.493217028184668,2.3948309234694,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0.341380344856499,0,0,1.03423011972439,1.16641845353302,0.173624994933292,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,1.48124672601102,0.23056390438806,0,0.325942115766024,0.31900115973192,0,0,1.02193298195737,0.470940769185074,0,0.902382642468723,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,0,0,0,0,0,0.265372693510018,0.611030144933625,0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| |||
|short_description=p7@JMJD6 | |||
}} |
Latest revision as of 16:40, 17 September 2015
Short description: | p7@JMJD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_JMJD6_5end |
Coexpression cluster: | NA |
Association with transcript: | -91bp_to_BC016837_5end |
EntrezGene: | JMJD6 |
HGNC: | 19355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.20e-22 | 136 |
classical monocyte | 5.09e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.09e-21 | 42 |
myeloid leukocyte | 3.18e-19 | 72 |
defensive cell | 9.93e-18 | 48 |
phagocyte | 9.93e-18 | 48 |
hematopoietic stem cell | 1.48e-17 | 168 |
nongranular leukocyte | 2.35e-17 | 115 |
hematopoietic cell | 3.91e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.81e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 7.93e-14 | 120 |
granulocyte | 1.26e-13 | 8 |
monopoietic cell | 3.75e-13 | 59 |
monocyte | 3.75e-13 | 59 |
monoblast | 3.75e-13 | 59 |
promonocyte | 3.75e-13 | 59 |
macrophage dendritic cell progenitor | 1.45e-12 | 61 |
myeloid cell | 9.22e-12 | 108 |
common myeloid progenitor | 9.22e-12 | 108 |
myeloid lineage restricted progenitor cell | 2.95e-11 | 66 |
granulocyte monocyte progenitor cell | 5.09e-11 | 67 |
basophil | 6.91e-10 | 3 |
blood cell | 1.14e-09 | 11 |
natural killer cell | 1.74e-09 | 3 |
pro-NK cell | 1.74e-09 | 3 |
mesenchymal cell | 1.54e-07 | 354 |
eosinophil | 1.79e-07 | 2 |
connective tissue cell | 3.55e-07 | 361 |
multi fate stem cell | 3.58e-07 | 427 |
somatic stem cell | 6.69e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.79e-10 | 98 |
blood island | 8.79e-10 | 98 |
bone marrow | 3.62e-09 | 76 |
hemolymphoid system | 2.31e-08 | 108 |
bone element | 3.62e-08 | 82 |
connective tissue | 8.93e-08 | 371 |
immune system | 1.63e-07 | 93 |
skeletal element | 4.73e-07 | 90 |