FFCP PHASE1:Hg19::chr17:74721959..74721969,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23210 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19355 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_BC016837_5end | |||
|cluster_id=chr17:74721959..74721969,- | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_5_at_JMJD6_5end | |||
|id=chr17:74721959..74721969,- | |||
|ontology_enrichment_celltype=CL:0000738!5.98e-17!140;CL:0000037!9.45e-17!172;CL:0000566!9.45e-17!172;CL:0000988!2.32e-15!182;CL:0002032!6.67e-15!165;CL:0000837!6.67e-15!165;CL:0002057!1.88e-14!42;CL:0002087!2.07e-12!119;CL:0000860!2.80e-12!45;CL:0000766!2.89e-12!76;CL:0000048!1.09e-11!430;CL:0000034!1.92e-11!444;CL:0000723!2.70e-11!436;CL:0002031!4.99e-11!124;CL:0000763!6.62e-11!112;CL:0000049!6.62e-11!112;CL:0000134!9.59e-11!358;CL:0000219!1.64e-10!390;CL:0002320!1.86e-09!365;CL:0000557!7.75e-08!71;CL:0002194!1.07e-07!63;CL:0000576!1.07e-07!63;CL:0000040!1.07e-07!63;CL:0000559!1.07e-07!63;CL:0000839!1.32e-07!70;CL:0002009!1.46e-07!65;CL:0000094!2.16e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;8.05e-21;8!CL:0000860;1.39e-16;33!CL:0002057;1.39e-16;33!CL:0000081;1.11e-14;11!CL:0000473;3.35e-13;39!CL:0000234;3.35e-13;39!CL:0000766;1.56e-12;69!CL:0000576;4.83e-12;48!CL:0000623;3.75e-09;3!CL:0000775;3.75e-09;3!CL:0000763;5.31e-09;100!CL:0000767;2.52e-08;3!CL:0000226;5.59e-08;3!CL:0000842;5.59e-08;3!CL:0002087;5.74e-08;104!CL:0000738;6.49e-08;136!CL:0002393;3.47e-07;6!CL:0002397;3.47e-07;6!CL:0000771;9.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.68e-29,136;CL:0000766,5.68e-26,72;CL:0000037,4.28e-25,168;CL:0000988,3.92e-23,177;CL:0000860,4.77e-22,42;CL:0002057,4.77e-22,42;CL:0002032,1.35e-21,161;CL:0000837,1.35e-21,161;CL:0000094,5.29e-21,8;CL:0002087,3.86e-19,115;CL:0000473,1.57e-18,48;CL:0000234,1.57e-18,48;CL:0000763,4.48e-18,108;CL:0000049,4.48e-18,108;CL:0002031,1.50e-16,120;CL:0000081,8.27e-15,11;CL:0000839,3.93e-14,66;CL:0000557,7.86e-14,67;CL:0002194,1.22e-13,59;CL:0000576,1.22e-13,59;CL:0000040,1.22e-13,59;CL:0000559,1.22e-13,59;CL:0002009,5.14e-13,61;CL:0000134,5.04e-12,354;CL:0002320,1.69e-11,361;CL:0000034,2.54e-11,441;CL:0000048,7.06e-11,427;CL:0000723,1.68e-10,433;CL:0000219,2.74e-10,386;CL:0000775,3.71e-09,3;CL:0000623,3.81e-09,3;CL:0000825,3.81e-09,3;CL:0000767,1.73e-08,3;CL:0000226,5.66e-08,3;CL:0000842,5.66e-08,3;CL:0000771,9.52e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.31e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.52e-09!375;UBERON:0002390!2.58e-09!102;UBERON:0003061!2.58e-09!102;UBERON:0002371!2.46e-08!80;UBERON:0002193!1.30e-07!112;UBERON:0001474!2.23e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.10e-14,98;UBERON:0003061,1.10e-14,98;UBERON:0002371,5.93e-14,76;UBERON:0002193,1.33e-12,108;UBERON:0001474,1.86e-12,82;UBERON:0002405,3.31e-11,93;UBERON:0002384,8.77e-11,371;UBERON:0004765,8.80e-11,90;UBERON:0003081,2.01e-09,203;UBERON:0001434,4.40e-09,100 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0.305653622991805,0,0.0787107813136792,2.75354993794233,3.83829398097213,1.54816123316076,0,0,0.369754010166788,0.309868802321207,0.142169232487422,0.293600439334847,2.76997704265939,7.42014455639524,3.90619567288533,0.223915474239924,0,0,1.16318591023652,0,0.485168122375632,1.39457422143411,0,1.54853185447552,2.01384674625505,1.2808035326455,0.236482229888585,2.41321976515633,1.29096936716765,1.35426486594342,3.38836211176688,0.272906150057846,0.224723484445085,3.36692281607993,0.320929027076094,1.27867425159808,1.31940520074686,0.797854630486527,0,1.16083695451434,0.56738522469114,0,2.51248665256743,1.5644487552606,0.434377689410233,1.21079900526674,0.368277635987565,0.949387162322653,0.633765858935825,1.06302149982522,0.209658645508376,1.57260083605093,1.35159203557356,0.16072558669708,0.285012743741249,0.79566670879636,0.547992461293902,0,0,0,0.853460445133014,0,0,0,0,1.70763890732835,1.76171156811282,0.764546456250458,1.32171328579026,4.48406850385229,0,0.983548850569165,3.53709686474248,2.87842098599313,0,0.32592226663359,0,0,0.111410456885174,0.589211814949674,0.221533894583621,0.270803863765016,0.25618263945135,0.650296737799391,0,0.552700035571697,0,0.444859689486181,1.07016331235885,0,0.113309342697566,1.14966148080576,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,7.66105624253983,19.2556940964125,5.21367853978076,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.72038491523742,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,1.48583000531826,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,7.9068250461638,15.511210565933,0.436094052142534,0.993943903390637,0.379891534993739,0.264818361626438,1.43418310374407,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,1.61450672119976,0,0.211931901159562,0.600182192168805,0.515262646192195,2.83404594050192,0.18611685633159,0.675105328965065,0.194874010322397,0.757301322732344,0.460249493211497,0.161646056818812,0.710019185033229,0.403008392910561,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0.088048434013226,0.829312462163088,1.15295962733569,1.13618190083742,0,0,0,1.71072446022705,0.102827492703324,0,0,0.224262168690721,0,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0.771622122786426,0,0.266422179016099,0.857867961948885,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0.672510863961164,4.13764596424047,12.7220269167115,5.26206448746968,0,0,0,0.335032530668698,0.637938751653163,8.23907726341901,11.966458368161,3.72973962092432,0,0,0,0.207970861530807,0.356857977594324,0.473107245101804,0.35142424497814,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,3.23571301227925,1.28073069364133,0.303127571446259,0,0,1.24053903909388,0.306923946576125,0,0.128139149255701,0,0.64341568457443,1.48418066444991,0.308419387605311,0,0,0,0.813472649219715,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0,1.13733384070897,0,0,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0,0.27470839445503,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,1.88887408098384,0.6970372701606,0.308033580176089,1.06461206063404,1.73986598415015,0.37064843820784,0.572499546967965,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.353437207037059,0.606547444719948,0,1.68503382495592,0.48763373908959,0,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.405820753925408,0,0.845086807596724,0.286822704408103,0.0982490410131212,1.426684205925,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,1.29694662238543,0,0,0,0.962479855263359,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.637705090915289,0.199579371432817,0.191505370132367,1.05836791361941,0,0.280797178113459,0.684704037099577,0.156679895773023,2.50634477090067,0.169291777801603,0.321176150207399,0,0,0.343505344755765,0.614481528616916,0.2236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| |||
|short_description=p5@JMJD6 | |||
}} |
Latest revision as of 16:40, 17 September 2015
Short description: | p5@JMJD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_JMJD6_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | -35bp_to_BC016837_5end |
EntrezGene: | JMJD6 |
HGNC: | 19355 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.10e-14 | 98 |
blood island | 1.10e-14 | 98 |
bone marrow | 5.93e-14 | 76 |
hemolymphoid system | 1.33e-12 | 108 |
bone element | 1.86e-12 | 82 |
immune system | 3.31e-11 | 93 |
connective tissue | 8.77e-11 | 371 |
skeletal element | 8.80e-11 | 90 |
lateral plate mesoderm | 2.01e-09 | 203 |
skeletal system | 4.40e-09 | 100 |