FFCP PHASE1:Hg19::chr17:74023291..74023310,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3503 | |||
|TSSclassifier=strong | |||
|UniProt=Q92817 | |||
|association_with_transcript=196bp_to_ENST00000301607,NM_001988,uc002jqi.2,uc010wss.1,uc010wst.1_5end | |||
|cluster_id=chr17:74023291..74023310,- | |||
|description=CAGE_peak_3_at_EVPL_5end | |||
|id=chr17:74023291..74023310,- | |||
|ontology_enrichment_celltype=CL:0000066!3.73e-29!254;CL:0002076!1.29e-15!43;CL:0000223!1.58e-15!59;CL:0002368!3.13e-09!13;CL:1000507!4.50e-08!12;CL:1000494!4.50e-08!12;CL:0002202!2.22e-07!9;CL:0002632!2.22e-07!9;CL:1000497!2.68e-07!18;CL:0002518!2.68e-07!18;CL:1000449!4.62e-07!16;CL:0002251!8.09e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000575;7.90e-11;2!CL:0000650;2.47e-10;2!CL:1000500;2.47e-10;2!CL:1000618;2.47e-10;2!CL:1001318;2.47e-10;2!CL:0002173;2.47e-10;2!CL:1000449;8.25e-08;15!CL:1000507;8.83e-08;10!CL:1000494;8.83e-08;10!CL:1000497;7.39e-07;17!CL:0002518;7.39e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.39e-10,2;CL:0000650,4.17e-10,2;CL:1000500,4.17e-10,2;CL:1000618,4.17e-10,2;CL:1001318,4.17e-10,2;CL:0002173,4.17e-10,2;CL:1000449,9.74e-08,15;CL:1000507,1.01e-07,10;CL:1000494,1.01e-07,10;CL:0000066,4.70e-07,253;CL:1000497,8.54e-07,17;CL:0002518,8.54e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.59e-16!106;DOID:0050687!1.33e-08!143;DOID:299!2.37e-08!25;DOID:7!1.82e-07!39;DOID:5093!3.50e-07!4;DOID:1612!3.50e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.21e-12;4!DOID:1612;2.21e-12;4!DOID:299;2.42e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.26e-12,4;DOID:1612,2.26e-12,4;DOID:299,1.87e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.58e-22!169;UBERON:0000925!3.58e-22!169;UBERON:0006595!3.58e-22!169;UBERON:0001007!1.31e-18!155;UBERON:0001555!1.31e-18!155;UBERON:0007026!1.31e-18!155;UBERON:0004921!1.48e-15!129;UBERON:0004185!1.48e-15!129;UBERON:0001004!1.64e-14!72;UBERON:0000466!2.74e-13!126;UBERON:0000464!8.01e-13!104;UBERON:0000077!2.23e-12!130;UBERON:0005911!2.32e-12!82;UBERON:0006554!8.15e-12!44;UBERON:0005177!1.11e-11!107;UBERON:0000065!1.76e-11!53;UBERON:0001008!2.16e-11!45;UBERON:0001041!7.58e-11!98;UBERON:0009569!9.49e-11!113;UBERON:0005178!6.25e-10!34;UBERON:0002224!6.25e-10!34;UBERON:0005153!8.17e-10!37;UBERON:0005181!1.73e-09!35;UBERON:0008947!4.28e-09!38;UBERON:0003258!4.28e-09!38;UBERON:0002048!5.00e-09!22;UBERON:0000117!5.00e-09!22;UBERON:0000171!5.00e-09!22;UBERON:0000170!5.00e-09!22;UBERON:0005597!5.00e-09!22;UBERON:0000118!5.00e-09!22;UBERON:0000161!7.24e-09!35;UBERON:0000062!1.48e-08!511;UBERON:0000058!1.80e-08!26;UBERON:0000915!2.70e-08!52;UBERON:0009773!4.50e-08!12;UBERON:0001231!4.50e-08!12;UBERON:0004810!4.50e-08!12;UBERON:0000481!4.63e-08!347;UBERON:0000064!6.35e-08!219;UBERON:0001444!9.18e-08!48;UBERON:0003064!9.91e-08!37;UBERON:0006555!1.01e-07!17;UBERON:0005103!1.01e-07!17;UBERON:0000083!1.01e-07!17;UBERON:0009201!1.01e-07!17;UBERON:0004819!1.01e-07!17;UBERON:0006553!1.01e-07!17;UBERON:0003074!1.01e-07!17;UBERON:0003060!1.01e-07!17;UBERON:0000072!1.49e-07!46;UBERON:0004876!1.61e-07!20;UBERON:0000166!1.73e-07!21;UBERON:0005157!2.03e-07!51;UBERON:0003729!3.52e-07!5;UBERON:0000080!3.87e-07!18;UBERON:0002120!3.87e-07!18;UBERON:0004875!3.87e-07!18;UBERON:0005721!3.87e-07!18;UBERON:0005754!3.87e-07!18;UBERON:0007297!3.87e-07!18;UBERON:0003104!4.00e-07!238;UBERON:0009142!4.00e-07!238;UBERON:0000489!4.14e-07!32;UBERON:0004211!4.62e-07!16;UBERON:0001285!4.62e-07!16;UBERON:0007684!4.62e-07!16;UBERON:0003220!4.62e-07!16;UBERON:0004208!4.62e-07!16;UBERON:0002113!7.65e-07!27;UBERON:0003918!7.65e-07!27;UBERON:0005095!7.65e-07!27;UBERON:0007687!7.65e-07!27;UBERON:0000063!8.63e-07!97;UBERON:0000365!8.69e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;2.47e-10;2!UBERON:0003838;2.47e-10;2!UBERON:0003586;2.47e-10;2!UBERON:0005169;2.47e-10;2!UBERON:0002321;2.47e-10;2!UBERON:0005215;2.47e-10;2!UBERON:0002303;2.47e-10;2!UBERON:0002319;2.47e-10;2!UBERON:0006554;6.43e-09;30!UBERON:0001008;6.43e-09;30!UBERON:0006555;8.25e-08;15!UBERON:0004819;8.25e-08;15!UBERON:0001285;8.25e-08;15!UBERON:0007684;8.25e-08;15!UBERON:0004211;8.83e-08;10!UBERON:0009773;8.83e-08;10!UBERON:0001231;8.83e-08;10!UBERON:0004810;8.83e-08;10!UBERON:0001723;1.72e-07;3!UBERON:0001033;1.72e-07;3!UBERON:0002048;2.62e-07;22!UBERON:0000117;2.62e-07;22!UBERON:0000171;2.62e-07;22!UBERON:0000170;2.62e-07;22!UBERON:0005178;2.63e-07;34!UBERON:0002224;2.63e-07;34!UBERON:0000915;7.97e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.17e-10,2;UBERON:0003838,4.17e-10,2;UBERON:0003586,4.17e-10,2;UBERON:0005169,4.17e-10,2;UBERON:0002321,4.17e-10,2;UBERON:0005215,4.17e-10,2;UBERON:0002303,4.17e-10,2;UBERON:0002319,4.17e-10,2;UBERON:0000915,2.42e-09,52;UBERON:0009569,9.27e-09,112;UBERON:0005178,6.11e-08,34;UBERON:0002224,6.11e-08,34;UBERON:0004211,9.74e-08,15;UBERON:0009773,9.74e-08,15;UBERON:0001231,9.74e-08,15;UBERON:0001285,9.74e-08,15;UBERON:0007684,9.74e-08,15;UBERON:0004208,9.74e-08,15;UBERON:0004810,1.01e-07,10;UBERON:0005181,1.12e-07,35;UBERON:0001723,1.39e-07,3;UBERON:0001033,1.39e-07,3;UBERON:0010056,1.39e-07,3;UBERON:0005177,1.82e-07,101;UBERON:0002048,2.76e-07,22;UBERON:0000117,2.76e-07,22;UBERON:0000171,2.76e-07,22;UBERON:0000170,2.76e-07,22;UBERON:0005597,2.76e-07,22;UBERON:0000118,2.76e-07,22;UBERON:0006555,3.09e-07,16;UBERON:0004819,3.09e-07,16;UBERON:0000065,3.74e-07,54;UBERON:0001004,5.43e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.09340350391728,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.263504357079378,1.70272798147026,1.09288586487763,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0,0,0,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0.768251997860379,1.1240175325762,0.201057944823262,0.555530670951178,0,0,0,0,0.117408694235822,0,0,0,7.90204397959275,8.58486162094873,0,0,0,0,0.503946384596579,0.425325291727159,0,0,0.383382679165211,0,0,0.414656231081544,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0.902399225814824,0.231046011313244,1.56869953835371,0,0.211103257785751,0,0,0,0,1.08378575017541,1.50506932156456,0.509752546090077,2.49322802678617,0.447749509444357,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.893288987462089,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.68120910214315,0,0.0941438007767792,0.43050537267123,1.68471475667626,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,3.81991175580304,0.890894042497916,1.84296421259539,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.539210106883961,0.358042349351218,0,0.789147245095469,0,0,0,0,0,3.64598865519327,0.874599999961957,0,0.227586896570999,3.81380475439149,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0.278847488557207,1.23120413606075,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,1.70765727617876,0,0.173559738335131,2.74378712760257,0.435296032902013,0.17472666824203,0,0,0.146178634172371,0,5.23740689037465,0,0,0,0,0,0,0.160317640503067,0.213452994739353,0,1.58499458869517,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.393915911536118,0.412079291905832,0.26961417541674,0.590564889088493,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,1.0063040627978,0.551639951094387,1.78345599658994,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,1.60181118851542,1.10043013569766,1.65695622138878,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,1.23520578864389,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25739752552359,0.943757786781923,0.366857197043358,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.333694205676207,0.156986185701028,0,0,0.913158720509496,0,0.47775168788705,0.142953088353313,0.158013611732727,0,0,0,0,0,1.38251932362818,0.430227358820278,0,0,0,0.9164274741762,0,0,0.447421727191169,0,1.46301509978723,0,0,0,0,0,0,0,0.11294608203896,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.633492505057185,0.101988829741982,0,0.18378979906969,0,0,0,0,0,3.83821167421766,0.714193294391221,0,0,0.112131862580613,0.891060215894309,0.404234377916439,3.26575121845442,1.71116650542641,2.28996980249598,0.502055437748735,0,0.325613074443898,0,0,1.79650404213174,2.34640942403454,0.244482888365733,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p3@EVPL | |||
}} |
Latest revision as of 13:39, 17 September 2015
Short description: | p3@EVPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EVPL_5end |
Coexpression cluster: | NA |
Association with transcript: | 196bp_to_ENST00000301607, NM_001988, uc002jqi.2, uc010wss.1, uc010wst.1_5end |
EntrezGene: | EVPL |
HGNC: | 3503 |
UniProt: | Q92817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.39e-10 | 2 |
mesangial cell | 4.17e-10 | 2 |
kidney interstitial cell | 4.17e-10 | 2 |
juxtaglomerular complex cell | 4.17e-10 | 2 |
renal interstitial pericyte | 4.17e-10 | 2 |
extraglomerular mesangial cell | 4.17e-10 | 2 |
epithelial cell of nephron | 9.74e-08 | 15 |
kidney tubule cell | 1.01e-07 | 10 |
nephron tubule epithelial cell | 1.01e-07 | 10 |
epithelial cell | 4.70e-07 | 253 |
kidney cell | 8.54e-07 | 17 |
kidney epithelial cell | 8.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 4.17e-10 | 2 |
abdominal segment connective tissue | 4.17e-10 | 2 |
trunk connective tissue | 4.17e-10 | 2 |
interstitial tissue | 4.17e-10 | 2 |
extraglomerular mesangium | 4.17e-10 | 2 |
kidney interstitium | 4.17e-10 | 2 |
juxtaglomerular apparatus | 4.17e-10 | 2 |
mesangium | 4.17e-10 | 2 |
thoracic segment of trunk | 2.42e-09 | 52 |
subdivision of trunk | 9.27e-09 | 112 |
thoracic cavity element | 6.11e-08 | 34 |
thoracic cavity | 6.11e-08 | 34 |
nephron epithelium | 9.74e-08 | 15 |
renal tubule | 9.74e-08 | 15 |
nephron tubule | 9.74e-08 | 15 |
nephron | 9.74e-08 | 15 |
uriniferous tubule | 9.74e-08 | 15 |
nephrogenic mesenchyme | 9.74e-08 | 15 |
nephron tubule epithelium | 1.01e-07 | 10 |
thoracic segment organ | 1.12e-07 | 35 |
tongue | 1.39e-07 | 3 |
gustatory system | 1.39e-07 | 3 |
future tongue | 1.39e-07 | 3 |
trunk region element | 1.82e-07 | 101 |
lung | 2.76e-07 | 22 |
respiratory tube | 2.76e-07 | 22 |
respiration organ | 2.76e-07 | 22 |
pair of lungs | 2.76e-07 | 22 |
lung primordium | 2.76e-07 | 22 |
lung bud | 2.76e-07 | 22 |
excretory tube | 3.09e-07 | 16 |
kidney epithelium | 3.09e-07 | 16 |
respiratory tract | 3.74e-07 | 54 |
respiratory system | 5.43e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.26e-12 | 4 |
breast cancer | 2.26e-12 | 4 |
adenocarcinoma | 1.87e-11 | 25 |