FFCP PHASE1:Hg19::chr17:73719483..73719489,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:73719483..73719489,- | |||
|description=CAGE_peak_at_chr17:73719483..73719489,- | |||
|id=chr17:73719483..73719489,- | |||
|ontology_enrichment_celltype=CL:0002076!1.53e-21!43;CL:0000223!2.10e-17!59;CL:0000066!7.00e-17!254;CL:0002251!2.35e-13!21;CL:0002368!2.34e-11!13;CL:0002202!5.15e-07!9;CL:0002632!5.15e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.98e-29;3!CL:0002202;1.46e-26;9!CL:0002632;1.46e-26;9!CL:0002368;2.21e-18;13!CL:0000307;8.99e-14;3!CL:1001319;3.76e-11;1!CL:1000600;3.76e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.63e-29,3;CL:0002202,1.47e-26,9;CL:0002632,1.47e-26,9;CL:0002368,2.21e-18,13;CL:0000068,1.02e-13,3;CL:0000069,1.02e-13,3;CL:0000307,1.02e-13,3;CL:0000377,1.02e-13,3;CL:1001319,3.76e-11,1;CL:1000600,3.76e-11,1;CL:0002076,2.20e-10,42;CL:0000223,1.69e-09,58;CL:0000066,3.21e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000377;8.99e-14;3 | |||
|ontology_enrichment_disease=DOID:305!7.22e-14!106;DOID:1749!6.37e-13!14;DOID:299!4.11e-11!25;DOID:0050687!2.81e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3111;5.84e-11;1!DOID:3603;5.84e-11;1!DOID:5093;7.84e-11;4!DOID:1612;7.84e-11;4!DOID:299;1.33e-09;25!DOID:4362;1.48e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,5.57e-11,1;DOID:3603,5.57e-11,1;DOID:5093,7.84e-11,4;DOID:1612,7.84e-11,4;DOID:299,1.24e-09,25;DOID:4362,1.72e-08,5;DOID:305,1.53e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.85e-16!169;UBERON:0000925!2.85e-16!169;UBERON:0006595!2.85e-16!169;UBERON:0001007!7.98e-12!155;UBERON:0001555!7.98e-12!155;UBERON:0007026!7.98e-12!155;UBERON:0004921!1.59e-09!129;UBERON:0004185!1.59e-09!129;UBERON:0000344!2.33e-09!12;UBERON:0000077!5.94e-09!130;UBERON:0001004!8.52e-09!72;UBERON:0003729!3.12e-08!5;UBERON:0000062!9.20e-08!511;UBERON:0007023!1.01e-07!115;UBERON:0003343!2.04e-07!4;UBERON:0004785!2.04e-07!4;UBERON:0000161!2.66e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.98e-29;3!UBERON:0002031;1.98e-29;3!UBERON:0002185;6.26e-18;5!UBERON:0007196;6.36e-16;15!UBERON:0001558;6.36e-16;15!UBERON:0000485;5.61e-13;7!UBERON:0004645;3.76e-11;1!UBERON:0001256;3.76e-11;1!UBERON:0001259;3.76e-11;1!UBERON:0000997;5.84e-11;1!UBERON:0005056;5.84e-11;1!UBERON:0004176;5.84e-11;1!UBERON:0002135;1.15e-10;1!UBERON:0000002;2.87e-07;6!UBERON:0001560;2.87e-07;6!UBERON:0005178;3.50e-07;34!UBERON:0002224;3.50e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.63e-29,3;UBERON:0002031,1.63e-29,3;UBERON:0002185,5.58e-18,5;UBERON:0007196,6.36e-16,15;UBERON:0001558,6.36e-16,15;UBERON:0004645,3.76e-11,1;UBERON:0001256,3.76e-11,1;UBERON:0001259,3.76e-11,1;UBERON:0000997,5.05e-11,1;UBERON:0005056,5.05e-11,1;UBERON:0002135,1.46e-10,1;UBERON:0000485,3.06e-10,9;UBERON:0000915,2.10e-08,52;UBERON:0000002,3.25e-07,6;UBERON:0001560,3.25e-07,6;UBERON:0005178,6.05e-07,34;UBERON:0002224,6.05e-07,34;UBERON:0005181,9.67e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,5.51652734687356,3.31326510656075,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,5.53143078571493,5.15091697256924,0,0,0,0.93733833986777,0,0.283550194484773,0,0,1.91691339582606,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.01090682660736,2.17781969722645,0.188287601553558,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0.95497793895076,0,0.614321404198464,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0,1.25815691606258,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,3.48559360696508,0.0769502585037971,0,0.69169171316418,0.359030577639089,0.217294743844016,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0.978323094660449,0.242780379534093,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,2.35181753794506,1.04471047896483,0,0,0.19351266257817,0.438535902517113,0.164230914106418,0.0969890164884194,0,0.451961481561065,0,0,0,0.391102765469606,0,0.85381197895741,0.19980960958213,0.432271251462318,0,0,0,0,0.471388069233591,0,0,0,0,0,0.136905378891993,0,0,0,1.11712960508902,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.104909176269996,0,0,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.537266523244462,0,0.219284049578707,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,1.06172751012966,0.733714394086716,0.577628330751691,0,0,0,0.0752103283492573,0,0,0,0.327543835020193,0.443568258651136,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.443511850813194,0,0,0,0,0,0.111231401892069,0.078493092850514,0,1.40136081656895,0,0,0,0,0,0,0,0,0.414432328326074,0.17071847709395,1.38251932362818,0,0,0,0.846774100381858,0,0,0,0.111855431797792,0.883352102537187,9.26576229865248,0,0,0,0,0,0,0,0.5647304101948,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.281951753939561,0.45120521581504,0,0.71421575442263,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.310298987585686,0.426467963801962,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.358611026963382,0,4.63998631082555,0.106727345877715,0,1.88632924423832,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr17:73719483..73719489,- | |||
}} |
Latest revision as of 21:11, 25 July 2015
Short description: | p@chr17:73719483..73719489, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73719483..73719489, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.63e-29 | 3 |
epithelial cell of tracheobronchial tree | 1.47e-26 | 9 |
epithelial cell of lower respiratory tract | 1.47e-26 | 9 |
respiratory epithelial cell | 2.21e-18 | 13 |
duct epithelial cell | 1.02e-13 | 3 |
branched duct epithelial cell | 1.02e-13 | 3 |
tracheal epithelial cell | 1.02e-13 | 3 |
tracheoblast | 1.02e-13 | 3 |
bladder cell | 3.76e-11 | 1 |
lower urinary tract cell | 3.76e-11 | 1 |
endo-epithelial cell | 2.20e-10 | 42 |
endodermal cell | 1.69e-09 | 58 |
epithelial cell | 3.21e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.63e-29 | 3 |
epithelium of bronchus | 1.63e-29 | 3 |
bronchus | 5.58e-18 | 5 |
tracheobronchial tree | 6.36e-16 | 15 |
lower respiratory tract | 6.36e-16 | 15 |
urinary bladder urothelium | 3.76e-11 | 1 |
wall of urinary bladder | 3.76e-11 | 1 |
mucosa of urinary bladder | 3.76e-11 | 1 |
mammalian vulva | 5.05e-11 | 1 |
external female genitalia | 5.05e-11 | 1 |
mitral valve | 1.46e-10 | 1 |
simple columnar epithelium | 3.06e-10 | 9 |
thoracic segment of trunk | 2.10e-08 | 52 |
uterine cervix | 3.25e-07 | 6 |
neck of organ | 3.25e-07 | 6 |
thoracic cavity element | 6.05e-07 | 34 |
thoracic cavity | 6.05e-07 | 34 |
thoracic segment organ | 9.67e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 5.57e-11 | 1 |
mucinous cystadenocarcinoma | 5.57e-11 | 1 |
thoracic cancer | 7.84e-11 | 4 |
breast cancer | 7.84e-11 | 4 |
adenocarcinoma | 1.24e-09 | 25 |
cervical cancer | 1.72e-08 | 5 |
carcinoma | 1.53e-07 | 106 |