FFCP PHASE1:Hg19::chr17:56357272..56357293,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:56357272..56357293,- | |||
|coexpression_cluster_id=C209 | |||
|description=CAGE_peak_at_chr17:56357272..56357293,- | |||
|id=chr17:56357272..56357293,- | |||
|ontology_enrichment_celltype=CL:0001024!6.31e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000037;8.02e-18;1!CL:0001024;8.02e-18;1!CL:0002032;1.33e-17;1!CL:0000557;1.33e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,7.37e-18,1;CL:0000763,4.74e-07,108;CL:0000049,4.74e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:225!4.87e-10!1;DOID:8692!1.53e-09!31;DOID:1240!1.77e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-18;31!DOID:225;4.44e-18;1!DOID:1240;8.35e-12;39!DOID:74;1.03e-09;2!DOID:2531;3.23e-07;51!DOID:0060083;3.23e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.97e-19,31;DOID:225,4.44e-18,1;DOID:1240,3.52e-15,39;DOID:2531,1.44e-11,51;DOID:0060083,1.44e-11,51;DOID:74,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.00e-19!7;UBERON:0002106!7.36e-12!3;UBERON:0004854!7.36e-12!3;UBERON:0009034!7.36e-12!3;UBERON:0002095!7.36e-12!3;UBERON:0004782!7.36e-12!3;UBERON:0003281!7.36e-12!3;UBERON:0009664!7.36e-12!3;UBERON:0002296!7.36e-12!3;UBERON:0005602!7.36e-12!3;UBERON:0001179!7.36e-12!3;UBERON:0006293!7.36e-12!3;UBERON:0002084!1.15e-09!1;UBERON:0002082!1.15e-09!1;UBERON:0004706!1.15e-09!1;UBERON:0002370!4.59e-09!4;UBERON:0005058!4.59e-09!4;UBERON:0009113!4.59e-09!4;UBERON:0003295!4.59e-09!4;UBERON:0005562!4.59e-09!4;UBERON:0000974!7.01e-08!10;UBERON:0005057!9.23e-08!26 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,5.87200878669694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.48182705190277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.5213635771075,0,5.24939761776342,77.7132283034195,0,0,1.1241165257259,43.7905364604573,6.38769356535489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.472180532711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.773494655682926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.193766729508018,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:56357272..56357293,- | |||
}} |
Latest revision as of 19:16, 25 July 2015
Short description: | p@chr17:56357272..56357293, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:56357272..56357293, - |
Coexpression cluster: | C209_acute_myelodysplastic_CD34_granulocyte_CD133_liver_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 7.37e-18 | 1 |
myeloid cell | 4.74e-07 | 108 |
common myeloid progenitor | 4.74e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.97e-19 | 31 |
syndrome | 4.44e-18 | 1 |
leukemia | 3.52e-15 | 39 |
hematologic cancer | 1.44e-11 | 51 |
immune system cancer | 1.44e-11 | 51 |
hematopoietic system disease | 1.03e-09 | 2 |