FFCP PHASE1:Hg19::chr17:54991812..54991826,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12932 | |||
|TSSclassifier=strong | |||
|UniProt=Q14258 | |||
|association_with_transcript=-403bp_to_ENST00000316881,NM_005082,uc002iut.2,uc010dcj.2_5end | |||
|cluster_id=chr17:54991812..54991826,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_TRIM25_5end | |||
|id=chr17:54991812..54991826,- | |||
|ontology_enrichment_celltype=CL:0002057!3.57e-40!42;CL:0000766!1.42e-38!76;CL:0000860!1.77e-36!45;CL:0000763!2.69e-34!112;CL:0000049!2.69e-34!112;CL:0000557!4.70e-33!71;CL:0000839!9.03e-29!70;CL:0000738!2.13e-27!140;CL:0002009!2.23e-27!65;CL:0000037!5.00e-27!172;CL:0000566!5.00e-27!172;CL:0002032!3.73e-26!165;CL:0000837!3.73e-26!165;CL:0000988!1.22e-25!182;CL:0002194!1.77e-25!63;CL:0000576!1.77e-25!63;CL:0000040!1.77e-25!63;CL:0000559!1.77e-25!63;CL:0002031!1.26e-20!124;CL:0002087!4.42e-18!119;CL:0000094!7.83e-11!8;CL:0000134!2.92e-09!358;CL:0002320!1.32e-08!365;CL:0000081!2.74e-07!11;CL:0000219!9.88e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.09e-74;33!CL:0002057;7.09e-74;33!CL:0000473;8.01e-51;39!CL:0000234;8.01e-51;39!CL:0000576;3.61e-42;48!CL:0000766;1.85e-33;69!CL:0000094;6.87e-20;8!CL:0000763;1.43e-18;100!CL:0000081;3.55e-14;11!CL:0000775;1.70e-11;3!CL:0002087;1.79e-10;104!CL:0000738;1.81e-10;136!CL:0000097;5.95e-10;5!CL:0000771;7.19e-08;2!CL:0001014;5.85e-07;2!CL:0001016;5.85e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.21e-76,42;CL:0002057,1.21e-76,42;CL:0000766,2.18e-76,72;CL:0000557,2.21e-66,67;CL:0000473,5.71e-66,48;CL:0000234,5.71e-66,48;CL:0000763,1.72e-60,108;CL:0000049,1.72e-60,108;CL:0000839,3.16e-57,66;CL:0002009,1.25e-55,61;CL:0002194,4.95e-51,59;CL:0000576,4.95e-51,59;CL:0000040,4.95e-51,59;CL:0000559,4.95e-51,59;CL:0000738,1.56e-41,136;CL:0002032,5.98e-37,161;CL:0000837,5.98e-37,161;CL:0000037,1.17e-36,168;CL:0000988,3.23e-34,177;CL:0002031,4.72e-31,120;CL:0002087,7.65e-24,115;CL:0000094,9.16e-20,8;CL:0000081,4.36e-14,11;CL:0000134,8.37e-14,354;CL:0002320,2.63e-13,361;CL:0000219,1.47e-11,386;CL:0000775,1.76e-11,3;CL:0000097,4.76e-10,5;CL:0002028,4.76e-10,5;CL:0000048,1.97e-09,427;CL:0000034,2.15e-09,441;CL:0000723,3.86e-09,433;CL:0000771,7.19e-08,2;CL:0001014,4.54e-07,2;CL:0001016,4.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.19e-56;42!CL:0000049;1.71e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.22e-43!102;UBERON:0003061!2.22e-43!102;UBERON:0002193!3.38e-41!112;UBERON:0002371!1.06e-28!80;UBERON:0001474!1.26e-26!86;UBERON:0002405!1.91e-22!115;UBERON:0004765!5.28e-22!101;UBERON:0001434!5.28e-22!101;UBERON:0000178!2.46e-14!15;UBERON:0000179!2.46e-14!15;UBERON:0000463!2.46e-14!15;UBERON:0003081!1.11e-12!216;UBERON:0002204!2.01e-09!167;UBERON:0002384!1.73e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.37e-19;15!UBERON:0000179;2.37e-19;15!UBERON:0000463;2.37e-19;15!UBERON:0002390;3.11e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.39e-70,98;UBERON:0003061,2.39e-70,98;UBERON:0002193,7.78e-63,108;UBERON:0002371,1.92e-57,76;UBERON:0001474,1.46e-52,82;UBERON:0004765,4.66e-47,90;UBERON:0002405,3.10e-45,93;UBERON:0001434,2.10e-41,100;UBERON:0003081,3.46e-28,203;UBERON:0002204,6.12e-21,167;UBERON:0000178,2.35e-19,15;UBERON:0000179,2.35e-19,15;UBERON:0000463,2.35e-19,15;UBERON:0000926,3.99e-14,315;UBERON:0004120,3.99e-14,315;UBERON:0006603,3.99e-14,315;UBERON:0002384,1.25e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,1.15148819429164,1.08371286321253,0,0,0,0,0,0,4.9859586767869,5.81578897663411,5.20826089718044,0,0,0,2.18097358169347,0.755751887377619,2.42584061187816,5.11343881192506,4.93401465626191,10.2203102395384,98.6784905664976,57.6361589690476,50.6071971961572,24.1321976515633,10.973239620925,16.251178391321,5.64727018627814,3.0019676506363,4.49446968890169,21.1197885735923,16.0464513538047,22.3767994029664,39.9120073225927,42.6852227310292,31.5406315394194,11.6083695451434,19.2910976394988,29.272645702792,89.4445248314006,57.8846039446424,59.9441211386122,7.87019353423379,16.2042159834528,19.304205633894,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,15.511210565933,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.702012795417713,0,0,0,0,0,0,0,1.47798971368783,0.264145302039678,2.69526550203004,1.58531948758658,1.51490920111656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0,0.898401253958239,0,0,0,0,0,17.2271615507852,26.9245313283622,57.1893408541729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.862856803274467,1.17400313583789,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,0.753150406214233,0,0,0,0,6.5968189200182,2.29391162142713,4.5571774973933,1.90585420366231,2.46817363851717,9.07862635669804,6.48037724685738,2.37937552888281,0,0,0,0,0,0.0711418433484141,0,0.798317485731266,1.7235483311913,0,0,0,0.228234679033192,0,2.50634477090067,0,0.963528450622197,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0.659215496907038,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.947798694427319,0.60129367765797,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.176512253383001,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0.229160424011684,0,0,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.799791132412,1.5476039091159,0,0,0,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,0,0,0.496166021811951,0.197611631897944,0,0,3.80812462358632,1.0027595760908,1.22538230705385,0.655745261419609,0,0,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0.135939465953663,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.939839179798536,0.580120991762195,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.286888821570705,0,0,0,0,0.179650404213174,0,0,0,0,0.201273793591026,0 | |||
|short_description=p3@TRIM25 | |||
}} |
Latest revision as of 08:21, 16 September 2015
Short description: | p3@TRIM25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM25_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -403bp_to_ENST00000316881, NM_005082, uc002iut.2, uc010dcj.2_5end |
EntrezGene: | TRIM25 |
HGNC: | 12932 |
UniProt: | Q14258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.39e-70 | 98 |
blood island | 2.39e-70 | 98 |
hemolymphoid system | 7.78e-63 | 108 |
bone marrow | 1.92e-57 | 76 |
bone element | 1.46e-52 | 82 |
skeletal element | 4.66e-47 | 90 |
immune system | 3.10e-45 | 93 |
skeletal system | 2.10e-41 | 100 |
lateral plate mesoderm | 3.46e-28 | 203 |
musculoskeletal system | 6.12e-21 | 167 |
blood | 2.35e-19 | 15 |
haemolymphatic fluid | 2.35e-19 | 15 |
organism substance | 2.35e-19 | 15 |
mesoderm | 3.99e-14 | 315 |
mesoderm-derived structure | 3.99e-14 | 315 |
presumptive mesoderm | 3.99e-14 | 315 |
connective tissue | 1.25e-12 | 371 |