FFCP PHASE1:Hg19::chr17:48828395..48828410,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51747 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24309 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000503798_5end | |||
|cluster_id=chr17:48828395..48828410,+ | |||
|description=CAGE_peak_3_at_LUC7L3_5end | |||
|id=chr17:48828395..48828410,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.50e-09!235;DOID:14566!3.70e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!9.72e-09!41;UBERON:0001890!9.72e-09!41;UBERON:0006240!9.72e-09!41;UBERON:0001049!1.00e-08!57;UBERON:0005068!1.00e-08!57;UBERON:0006241!1.00e-08!57;UBERON:0007135!1.00e-08!57;UBERON:0003080!4.47e-08!42;UBERON:0002020!4.94e-08!34;UBERON:0003528!4.94e-08!34;UBERON:0002616!3.24e-07!59;UBERON:0002791!3.65e-07!33;UBERON:0001893!9.89e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.27e-08;32!UBERON:0003528;5.05e-08;34!UBERON:0002020;5.05e-08;34!UBERON:0002780;9.08e-08;41!UBERON:0001890;9.08e-08;41!UBERON:0001869;2.02e-07;32!UBERON:0001893;7.40e-07;34!UBERON:0000956;7.77e-07;25!UBERON:0000203;7.77e-07;25!UBERON:0000073;9.38e-07;53!UBERON:0002616;9.38e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.62e-11,53;UBERON:0002616,5.62e-11,53;UBERON:0001049,1.14e-10,56;UBERON:0005068,1.14e-10,56;UBERON:0006241,1.14e-10,56;UBERON:0007135,1.14e-10,56;UBERON:0002780,1.97e-10,41;UBERON:0001890,1.97e-10,41;UBERON:0003080,1.97e-10,41;UBERON:0006240,1.97e-10,41;UBERON:0003528,7.95e-10,34;UBERON:0002020,7.95e-10,34;UBERON:0002346,2.64e-09,86;UBERON:0002791,3.75e-09,32;UBERON:0001016,1.73e-08,89;UBERON:0003075,1.82e-08,82;UBERON:0007284,1.82e-08,82;UBERON:0000955,3.19e-08,68;UBERON:0006238,3.19e-08,68;UBERON:0001893,3.91e-08,34;UBERON:0001869,5.59e-08,32;UBERON:0001017,2.31e-07,81;UBERON:0003056,4.00e-07,61;UBERON:0000956,9.07e-07,25;UBERON:0000203,9.07e-07,25 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.563817616383885,5.00366491765652,3.12872766099101,3.48935409640147,0,0,0,0,0,0.218441372130172,0,0,0.662794751455832,2.6893005858071,1.80808358407193,1.46062018077475,0.975865597581014,0.492484232307152,0.204000691244253,0,2.0036519099174,1.23186982565596,1.00434111675842,1.14620108621927,0.985207073399349,0.787107813136792,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.774672005803016,1.84820002233648,1.46800219667424,0,1.00272223735071,0.651032612147555,1.34349284543955,0,0.77272670290256,0.872389432677388,0.755751887377619,0.970336244751265,0,0.822335776043652,1.54853185447552,0.28769239232215,1.0246428261164,0.236482229888585,0.689491361473237,1.93645405075148,2.70852973188684,0.752969358170419,0.272906150057846,0.224723484445085,0.306083892370903,1.28371610830437,0,0.659702600373432,0.199463657621632,1.27867425159808,0.580418477257168,0,0.622822248995575,1.50749199154046,0.521482918420201,0.434377689410233,1.81619850790011,0,0.632924774881769,0.422510572623884,1.4882300997553,0,0.336985893439485,0.600707571366025,0.16072558669708,1.42506371870624,0.59675003159727,0.91332076882317,1.75996244461323,1.09227722252426,0,0.853460445133014,1.60158394814405,2.29900975981793,3.96626923670917,2.86216126360609,3.98449078376614,0.587237189370939,1.91136614062614,1.32171328579026,1.68152568894461,1.05353633910031,1.37696839079683,1.17903228824749,0.411202997999018,1.00311897234407,0.32592226663359,0,7.79306913631645,0.445641827540694,1.76763544484902,1.77227115666897,0.812411591295047,2.43373507478783,1.56071217071854,2.63100647365882,1.10540007114339,2.02862160014537,1.33457906845854,1.87278579662799,3.1360657141493,1.35971211237079,0.383220493601921,0.68725489096526,1.51811815211702,1.27426165729639,2.60433381542567,0,1.6563263098555,2.17577238962511,0,1.89421801635213,2.46338399076314,0.80642697289893,1.87208137048455,0.724122019413995,0,0,0,1.80719576192283,0.50133791063589,0.724232594804119,0,0,1.03988298880475,1.10864698731282,0.614843499851882,0.130979075497713,0,0,0.324547393654683,0.696518949197069,0,0.476981248610684,1.14398982156026,2.22874500797739,0,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0,1.07159673940896,0.898117490504679,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.98613771219828,4.01571269048339,1.77334191099179,0.560677600142307,0,0.49333509683432,0.311211035399766,1.48181739276657,0.817309515567294,0.605429710579726,0.576175924479999,0,0.624320153660641,0,0.298897361103602,1.52664848236894,1.61872944368132,1.68540968042698,0.61246251376468,0.859840221182376,0.206651562351531,0,0.494533858557114,0,0,0.336672227908132,0.750711119231785,0,0,0.30648779579902,0.150238058906597,0.113432183160021,1.25572744982203,0.85422955527427,0.211931901159562,2.40072876867522,1.03052529238439,2.06112432036503,0.37223371266318,2.19409231913646,0.68205903612839,1.7670364197088,0.828449087780694,1.61646056818812,2.84007674013291,0.806016785821122,0,0.193260853163297,0,0.573609190778008,0.853815942907168,0.795178609928912,0.464775771478074,1.24393266018445,1.00928340350251,2.55484151353081,0,2.57296375277154,0,0.928735856063958,0,0.473227200159376,0.337169380156203,0.482022059766964,1.54411561825352,0.653638332277218,0.949082476444386,0.404493924480493,0.98110732562673,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,1.47586126251736,0,0.109750285408626,0,0.502644862058154,0,0.651616610620649,0,1.44331342025273,0.579652024875384,0,0.577465791044295,0,0.761016608938393,0,0,0.492434012174795,0,0.445893486866185,0,0.16798212819886,0.425325291727159,0.53735113621709,0,0,0,0.352193736052904,0.414656231081544,0.576479813667846,0.6312121671319,0.507983154337352,0,0,0,0.308482478109971,1.20137223137567,0.857479297891735,0.224262168690721,0.43596006883328,0.1466765716419,0.517086863031111,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0.791951872933429,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,1.01346914667305,1.43833425785268,0.358121926479791,1.56919201590938,0.591092280605782,2.15627574859517,0.898401253958239,0.254094624222463,0,0,0.335032530668698,1.27587750330633,0,0,0,0.24538298343828,0,0.271265023699736,1.45579603071565,1.60586089917446,1.73472656537328,0.468565659970853,0,0,0,0,0.184369168541703,0.260650843404249,0.391602314925481,0,0,2.5885704098234,0.426910231213777,0,1.66435439510497,0,0.744323423456331,3.22270143904931,1.12264037773229,1.28139149255701,0,0.321707842287215,0,0.771048469013278,0.532685175939381,0.574890092096664,1.03850885836724,0.813472649219715,1.45031339509947,0.40101294060657,0.460404944679482,0.114814448164607,0.910455840033585,0.131124414959424,0,0.308061348417659,0,0,0.422206515571503,0,0.850468526382578,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0,0.824328093181778,0.915694648183434,0.495056999523528,0,0,0,0,2.46477787383431,2.6095624703442,2.06754858726796,0.966782203814463,1.88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| |||
|short_description=p3@LUC7L3 | |||
}} |
Latest revision as of 04:10, 16 September 2015
Short description: | p3@LUC7L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LUC7L3_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000503798_5end |
EntrezGene: | LUC7L3 |
HGNC: | 24309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 5.62e-11 | 53 |
regional part of brain | 5.62e-11 | 53 |
neural tube | 1.14e-10 | 56 |
neural rod | 1.14e-10 | 56 |
future spinal cord | 1.14e-10 | 56 |
neural keel | 1.14e-10 | 56 |
regional part of forebrain | 1.97e-10 | 41 |
forebrain | 1.97e-10 | 41 |
anterior neural tube | 1.97e-10 | 41 |
future forebrain | 1.97e-10 | 41 |
brain grey matter | 7.95e-10 | 34 |
gray matter | 7.95e-10 | 34 |
neurectoderm | 2.64e-09 | 86 |
regional part of telencephalon | 3.75e-09 | 32 |
nervous system | 1.73e-08 | 89 |
neural plate | 1.82e-08 | 82 |
presumptive neural plate | 1.82e-08 | 82 |
brain | 3.19e-08 | 68 |
future brain | 3.19e-08 | 68 |
telencephalon | 3.91e-08 | 34 |
cerebral hemisphere | 5.59e-08 | 32 |
central nervous system | 2.31e-07 | 81 |
pre-chordal neural plate | 4.00e-07 | 61 |
cerebral cortex | 9.07e-07 | 25 |
pallium | 9.07e-07 | 25 |