FFCP PHASE1:Hg19::chr17:48276617..48276653,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48276617..48276653,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48276617..48276653,+ | |||
|id=chr17:48276617..48276653,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.84e-35!180;CL:0000057!9.11e-21!75;CL:0000183!2.03e-16!59;CL:0000680!4.42e-16!57;CL:0000056!4.42e-16!57;CL:0000355!4.42e-16!57;CL:0000187!2.81e-15!54;CL:0000048!7.08e-14!430;CL:0000393!1.75e-13!60;CL:0000211!1.75e-13!60;CL:0000723!5.62e-13!436;CL:0000034!1.05e-12!444;CL:0000192!1.81e-12!42;CL:0000514!1.81e-12!42;CL:0002371!4.10e-09!591;CL:0000144!1.67e-08!625;CL:0000359!2.80e-08!32;CL:0002334!1.04e-07!12;CL:0000222!4.45e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000134;6.88e-10;55!CL:0002334;1.45e-09;12!CL:0000048;7.94e-09;58!CL:0000723;3.29e-08;61!CL:0000057;7.95e-08;73!CL:0002569;1.92e-07;6!CL:0002320;3.59e-07;188!CL:0000349;5.56e-07;19!CL:0000034;7.37e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.87e-20,76;CL:0000048,9.27e-14,427;CL:0000723,4.11e-13,433;CL:0000034,2.76e-12,441;CL:0002320,8.80e-10,361;CL:0002334,1.54e-09,12;CL:0000134,3.82e-09,354;CL:0002569,1.43e-07,6;CL:0000219,1.94e-07,386;CL:0000349,3.99e-07,19;CL:0000187,9.99e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.65e-17!83;UBERON:0002329!1.65e-17!83;UBERON:0003077!1.65e-17!83;UBERON:0003059!1.65e-17!83;UBERON:0007282!1.65e-17!83;UBERON:0009618!1.65e-17!83;UBERON:0007285!1.65e-17!83;UBERON:0001134!2.31e-16!61;UBERON:0002036!2.31e-16!61;UBERON:0003082!2.31e-16!61;UBERON:0004290!3.16e-16!70;UBERON:0002385!3.74e-16!63;UBERON:0001015!3.74e-16!63;UBERON:0000383!3.74e-16!63;UBERON:0000486!1.33e-13!82;UBERON:0005256!2.13e-10!143;UBERON:0004872!1.02e-07!84;UBERON:0002100!2.29e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003104;8.45e-09;7!UBERON:0009142;8.45e-09;7!UBERON:0004457;8.78e-09;9!UBERON:0000042;8.78e-09;9!UBERON:0003688;2.92e-08;6!UBERON:0002358;2.92e-08;6!UBERON:0003684;2.92e-08;6!UBERON:0001178;2.92e-08;6!UBERON:0002384;4.52e-08;198!UBERON:0003422;1.92e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.62e-10,371;UBERON:0003688,3.03e-08,6;UBERON:0002358,3.03e-08,6;UBERON:0003684,3.03e-08,6;UBERON:0001178,3.03e-08,6;UBERON:0003422,1.43e-07,6;UBERON:0007524,2.87e-07,73;UBERON:0002329,7.25e-07,71;UBERON:0003059,7.25e-07,71;UBERON:0007282,7.25e-07,71;UBERON:0004290,7.25e-07,71;UBERON:0009618,7.25e-07,71;UBERON:0001134,8.55e-07,62;UBERON:0002036,8.55e-07,62;UBERON:0003082,8.55e-07,62 | |||
|phase1_expression=7.99384868790449,2.35510576280081,5.21531295155093,4.00293193412522,8.93922188854576,7.85104671690332,5.06599756336621,0,0,0,0,0,2.90143676051299,0.495065411840187,1.65698687863958,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,2.24400760368678,2.5076377718247,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,1.15076305659177,4.69870898099936,2.00535164254356,3.18662341713812,0,9.24606253575008,0.0945348171640679,2.88248216701333,1.40535657109002,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,19.3819061161174,1.64619665163954,1.85372853138506,6.59724227722272,3.19201543978521,1.68203280042692,5.33744978648525,8.6333641946006,0.622422070799533,1.75123873690594,0.980771418680752,1.51357427644931,2.88087962239999,0,0,0,0.448346041655403,0,0,0.280901613404497,0.408308342509787,1.35117749042945,0.516628905878827,8.31602000097437,10.3852110296994,0,4.31170885089743,0.168336113954066,0.250237039743928,0,2.19488810440419,11.9530240361618,10.065949946742,0.567160915800105,1.61450672119976,4.27114777637135,3.60284231971255,7.20218630602566,0.721367704669072,2.83404594050192,1.48893485065272,5.06328996723799,1.07180705677318,2.52433774244115,1.28869858099219,0.646584227275248,3.19508633264953,0.302256294682921,0.847802961552438,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,5.14592750554308,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,2.80483547606892,4.9388881359768,4.41026134156626,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,1.99594780200897,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.560655421726804,0.43596006883328,0.2933531432838,3.61960804121778,3.57656445851882,5.071816515336,2.12750493267896,5.2003718455683,0.514414748524284,0,1.3321108950805,0.714889968290738,7.5967024754802,4.11620168390384,0.65147236858747,2.48774364119782,2.37585561880029,0.301439377059586,0,0.199945982364114,0,0,0,1.91699884393266,5.7430967917057,0,0.868687840005475,0.61642896765115,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0.500170521059677,1.62759014219841,8.11086359970148,5.53129865271201,4.88877486605197,2.34282829985426,2.40756879782175,2.27407504055985,3.10419213877515,1.32845119707087,7.37476674166813,0.347534457872331,0.391602314925481,6.86286847621712,0,0,0,0.606255142892519,3.32870879020994,5.74541557326393,6.69891081110698,5.83155498494637,14.0330047216537,6.66323576129645,1.53512174720011,16.5679538777916,13.3576259800492,1.07946785661859,4.08391968220192,0.246381468041427,0,1.62694529843943,0,0,0,1.03333003348146,0.910455840033585,3.01586154406675,0,0,0,0,0,0,0,0,0,0.541892875087706,2.00675909541941,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0.457847324091717,0.330037999682352,0,0,3.21367859688319,0.386682873168488,0.924291702687866,1.5350367472613,0.964856007391714,0.537101224341368,1.45016693914229,1.53407929348982,2.04773681987496,0,0.192190067365106,0,0,0,5.98143458978216,0.6970372701606,0.616067160352178,1.59691809095107,0,0.9266210955196,0.143124886741991,2.232950216158,1.89827654831236,6.29079639948622,1.02359116524534,1.71175595213568,0.318203247925937,0.78494864019923,1.2591072030832,5.76527762445715,4.00562167975334,0.404364963146632,0,2.94880919367287,0.48763373908959,0.731140468893853,1.05650146756755,1.09199929126389,4.80778468642623,6.78048699721457,3.85955740482287,0,0,0.578775534266688,1.9676842561399,0.608731130888112,0.92947049429925,2.25356482025793,1.14729081763241,1.96498082026242,0.7133421029625,0.354761064070598,2.53329162357197,4.61012850143863,0.75894634753143,1.74967360122491,0,0.670302275535787,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,5.90975216557434,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00035336054936,0.113942055847001,0,0,0,0,1.83195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,1.83309043480088,0,0,0,0,8.02577647298789,0,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,5.19755703795225,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0083580899397,0,0,0,0,0,0,0,0.403100834920358,8.28689732147528,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0.314727528809989,0,0,0,0,0,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0,1.36310417428337,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94031243752936,2.57084640831947,0.554805861502613,0.378806010550178,1.0062716070103,1.77962244319307,0.228840068396924,2.87338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| |||
|short_description=p@chr17:48276617..48276653,+ | |||
}} |
Latest revision as of 18:38, 25 July 2015
Short description: | p@chr17:48276617..48276653, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48276617..48276653, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.87e-20 | 76 |
multi fate stem cell | 9.27e-14 | 427 |
somatic stem cell | 4.11e-13 | 433 |
stem cell | 2.76e-12 | 441 |
connective tissue cell | 8.80e-10 | 361 |
preadipocyte | 1.54e-09 | 12 |
mesenchymal cell | 3.82e-09 | 354 |
mesenchymal stem cell of umbilical cord | 1.43e-07 | 6 |
motile cell | 1.94e-07 | 386 |
extraembryonic cell | 3.99e-07 | 19 |
muscle cell | 9.99e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.62e-10 | 371 |
omentum | 3.03e-08 | 6 |
peritoneum | 3.03e-08 | 6 |
abdominal cavity | 3.03e-08 | 6 |
visceral peritoneum | 3.03e-08 | 6 |
mesenchyme of umbilical cord | 1.43e-07 | 6 |
dense mesenchyme tissue | 2.87e-07 | 73 |
somite | 7.25e-07 | 71 |
presomitic mesoderm | 7.25e-07 | 71 |
presumptive segmental plate | 7.25e-07 | 71 |
dermomyotome | 7.25e-07 | 71 |
trunk paraxial mesoderm | 7.25e-07 | 71 |
skeletal muscle tissue | 8.55e-07 | 62 |
striated muscle tissue | 8.55e-07 | 62 |
myotome | 8.55e-07 | 62 |