FFCP PHASE1:Hg19::chr17:48263765..48263788,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48263765..48263788,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48263765..48263788,+ | |||
|id=chr17:48263765..48263788,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.85e-31!180;CL:0000057!7.33e-22!75;CL:0000183!3.73e-13!59;CL:0000680!5.06e-12!57;CL:0000056!5.06e-12!57;CL:0000355!5.06e-12!57;CL:0000187!6.50e-12!54;CL:0000048!2.49e-11!430;CL:0000723!8.84e-11!436;CL:0000034!5.53e-10!444;CL:0000393!6.22e-10!60;CL:0000211!6.22e-10!60;CL:0002334!8.78e-10!12;CL:0000144!1.76e-09!625;CL:0000192!3.88e-09!42;CL:0000514!3.88e-09!42;CL:0002371!5.29e-09!591;CL:0002620!4.67e-07!23;CL:0000499!6.65e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.07e-12;12!CL:0000134;1.11e-11;55!CL:0000723;1.97e-10;61!CL:0000048;2.24e-10;58!CL:0002320;2.26e-08;188!CL:0002570;2.88e-08;8!CL:0000499;7.95e-08;28!CL:0000034;8.40e-08;69!CL:0002620;1.31e-07;23!CL:0000057;2.05e-07;73!CL:0002569;3.27e-07;6!CL:0000192;3.45e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.07e-20,76;CL:0000048,3.30e-18,427;CL:0000723,2.13e-17,433;CL:0000034,2.33e-16,441;CL:0002334,7.64e-13,12;CL:0002320,6.23e-12,361;CL:0000187,1.58e-10,55;CL:0000134,2.42e-10,354;CL:0000680,3.31e-10,58;CL:0000056,3.31e-10,58;CL:0000355,3.31e-10,58;CL:0000192,2.36e-09,43;CL:0000514,2.36e-09,43;CL:0000219,5.44e-09,386;CL:0000393,1.24e-08,61;CL:0000211,1.24e-08,61;CL:0002570,1.68e-08,8;CL:0000499,7.92e-08,28;CL:0002620,1.34e-07,23;CL:0002569,2.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;3.45e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.50e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.44e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.62e-13!83;UBERON:0002329!5.62e-13!83;UBERON:0003077!5.62e-13!83;UBERON:0003059!5.62e-13!83;UBERON:0007282!5.62e-13!83;UBERON:0009618!5.62e-13!83;UBERON:0007285!5.62e-13!83;UBERON:0002385!1.68e-12!63;UBERON:0001015!1.68e-12!63;UBERON:0000383!1.68e-12!63;UBERON:0001134!2.98e-12!61;UBERON:0002036!2.98e-12!61;UBERON:0003082!2.98e-12!61;UBERON:0004290!1.20e-10!70;UBERON:0005256!2.34e-10!143;UBERON:0000486!2.13e-08!82;UBERON:0001013!1.05e-07!14;UBERON:0002100!2.36e-07!216;UBERON:0002384!9.26e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.41e-09;198!UBERON:0004457;9.12e-09;9!UBERON:0000042;9.12e-09;9!UBERON:0003104;2.35e-08;7!UBERON:0009142;2.35e-08;7!UBERON:0003688;3.41e-08;6!UBERON:0002358;3.41e-08;6!UBERON:0003684;3.41e-08;6!UBERON:0001178;3.41e-08;6!UBERON:0001013;4.05e-08;14!UBERON:0003422;3.27e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.85e-12,371;UBERON:0001134,7.57e-11,62;UBERON:0002036,7.57e-11,62;UBERON:0003082,7.57e-11,62;UBERON:0002385,3.33e-10,64;UBERON:0001015,3.33e-10,64;UBERON:0000383,3.33e-10,64;UBERON:0007524,2.37e-09,73;UBERON:0002329,5.42e-09,71;UBERON:0003059,5.42e-09,71;UBERON:0007282,5.42e-09,71;UBERON:0004290,5.42e-09,71;UBERON:0009618,5.42e-09,71;UBERON:0003077,9.79e-09,72;UBERON:0007285,9.79e-09,72;UBERON:0007503,1.41e-08,78;UBERON:0001013,2.89e-08,14;UBERON:0003688,3.63e-08,6;UBERON:0002358,3.63e-08,6;UBERON:0003684,3.63e-08,6;UBERON:0001178,3.63e-08,6;UBERON:0000486,9.83e-08,83;UBERON:0005256,1.17e-07,122;UBERON:0003104,2.02e-07,160;UBERON:0009142,2.02e-07,160;UBERON:0003422,2.58e-07,6 | |||
|phase1_expression=3.81524596468169,5.56661362116556,7.18867460889453,7.00513088471913,8.04529969969118,4.36169262050184,5.06599756336621,0,0.261185628199839,0,0,0.436882744260345,3.16520373874144,0.74259811776028,2.31978163009541,0.672325146451775,1.80808358407193,1.46062018077475,1.46379839637152,1.84681587115182,3.67201244239655,4.38836610069323,0,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,4.09160197899297,12.6503703334598,3.50936537445123,7.53201898596283,0,6.8128881842369,0.189069634328136,1.77383517970051,1.40535657109002,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,16.8970463576408,2.65924074495618,1.19168262731897,17.4970338656776,1.77334191099179,3.36406560085384,0,13.813382711361,0.311211035399766,0.808264032418128,0.653847612453835,3.32986340818849,0,0.468642863667593,0,0,0.896692083310806,0.117434498643765,0,0,0.204154171254893,0.491337269247072,1.03325781175765,2.37600571456411,11.6215456760922,0.910161361938026,9.3420358436111,0.673344455816265,0.750711119231785,0,2.19488810440419,8.88814607817157,3.45547535485173,0.907457465280168,8.25192324168765,4.69826255400848,3.60284231971255,9.00273288253207,2.37020817248409,6.1833729610951,4.09457083929498,9.95780360223471,1.85130309806277,7.06814567883521,2.85354685791128,2.26304479546337,6.74518225781567,1.10827308050404,2.03472710772585,0,0,0,0,0,0,0.207322110030741,0,0,0,3.21620469096443,0,0.464367928031979,2.16563844500876,0.118306800039844,0,0,0,0,0,0,0,0,0,2.80483547606892,5.3504621473082,4.41026134156626,0,0,1.18157981336281,0,0,0.857839051492628,0.219500570817251,0,0,0,0.325808305310325,0,0,0.231860809950154,0.70445216541493,0,0,0,0,0,0,0,0,0,1.00789276919316,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.784917590417525,3.48768055066624,0.8800594298514,4.52451005152222,3.57656445851882,3.381211010224,4.5209479819428,4.16029747645464,1.02882949704857,4.25547396069835,2.93064396917709,6.86294369559108,16.2786481617433,4.93944202068461,1.95441710576241,4.97548728239564,1.58390374586686,0.301439377059586,0.871533458600294,0.599837947092342,0,0,0,5.5113716763064,18.3779097334582,0,0.868687840005475,1.02738161275192,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8403723757871,5.00170521059677,0.542530047399471,29.115920614313,25.336916409197,16.7164559935971,3.39710103478868,1.50473049863859,0,1.03473071292505,3.32112799267718,2.21243002250044,0.521301686808497,3.52442083432933,10.6374461381365,0,0,0,0.909382714338778,11.6504807657348,6.35019615992329,5.21026396419431,6.29194090481056,19.6462066103152,10.1229927912004,4.60536524160033,23.6455264081103,7.42090332224955,2.92998418225046,7.10246901252508,1.72467027628999,1.55776328755086,5.11325665223821,0,0.200506470303285,0,3.09999010044438,5.09855270418808,4.327105693661,0,0,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,3.08454505380579,0.541892875087706,1.50506932156456,0,0,0,0,0,0,0,0,0,1.19040304263846,0.660075999364704,0,0,4.82051789532479,0.676695028044854,0.308097234229289,1.07452572308291,0.964856007391714,1.28904293841928,3.33538396002726,0.426133137080504,11.3961005627824,0,0.192190067365106,0,0,1.39453664789186,15.740617341532,0,1.84820148105653,0.532306030317022,0,0.55597265731176,0,0,2.53103539774981,6.86268698125769,2.303080121802,1.28381696410176,1.59101623962968,0.78494864019923,1.61885211824983,6.03981465419321,1.88499843753098,0.404364963146632,1.58510321173008,0.842516912477962,3.90106991271672,2.19342140668156,0,3.54899769660763,9.19135307699133,2.26016233240486,1.10273068709225,3.3171948762061,0,3.47265320560013,2.62357900818653,0,0,1.12678241012897,1.14729081763241,5.20719917369542,0,0,4.64436797654861,7.90307743103764,0.379473173765715,2.79947776195986,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.796991953004279,0.552567831062295,0,0,0,4.3545542272653,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,1.19076871422421,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,1.83309043480088,0.296521128680622,0,0.104421949505455,0.067401132980677,8.82835412028668,0,0,0,0,0,2.41981432097328,0,0.252746318513952,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.164230914106418,0,0,9.0392296312213,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.279282401272254,0,0,0.199679000498991,0,0,0.739018197353989,8.28689732147528,0,0.0787831823072236,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0,3.06698439213759,0,0,2.65013777824443,0,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| |||
|short_description=p@chr17:48263765..48263788,+ | |||
}} |
Latest revision as of 18:32, 25 July 2015
Short description: | p@chr17:48263765..48263788, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48263765..48263788, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.07e-20 | 76 |
multi fate stem cell | 3.30e-18 | 427 |
somatic stem cell | 2.13e-17 | 433 |
stem cell | 2.33e-16 | 441 |
preadipocyte | 7.64e-13 | 12 |
connective tissue cell | 6.23e-12 | 361 |
muscle cell | 1.58e-10 | 55 |
mesenchymal cell | 2.42e-10 | 354 |
muscle precursor cell | 3.31e-10 | 58 |
myoblast | 3.31e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.31e-10 | 58 |
smooth muscle cell | 2.36e-09 | 43 |
smooth muscle myoblast | 2.36e-09 | 43 |
motile cell | 5.44e-09 | 386 |
electrically responsive cell | 1.24e-08 | 61 |
electrically active cell | 1.24e-08 | 61 |
mesenchymal stem cell of adipose | 1.68e-08 | 8 |
stromal cell | 7.92e-08 | 28 |
skin fibroblast | 1.34e-07 | 23 |
mesenchymal stem cell of umbilical cord | 2.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.85e-12 | 371 |
skeletal muscle tissue | 7.57e-11 | 62 |
striated muscle tissue | 7.57e-11 | 62 |
myotome | 7.57e-11 | 62 |
muscle tissue | 3.33e-10 | 64 |
musculature | 3.33e-10 | 64 |
musculature of body | 3.33e-10 | 64 |
dense mesenchyme tissue | 2.37e-09 | 73 |
somite | 5.42e-09 | 71 |
presomitic mesoderm | 5.42e-09 | 71 |
presumptive segmental plate | 5.42e-09 | 71 |
dermomyotome | 5.42e-09 | 71 |
trunk paraxial mesoderm | 5.42e-09 | 71 |
paraxial mesoderm | 9.79e-09 | 72 |
presumptive paraxial mesoderm | 9.79e-09 | 72 |
epithelial vesicle | 1.41e-08 | 78 |
adipose tissue | 2.89e-08 | 14 |
omentum | 3.63e-08 | 6 |
peritoneum | 3.63e-08 | 6 |
abdominal cavity | 3.63e-08 | 6 |
visceral peritoneum | 3.63e-08 | 6 |
multilaminar epithelium | 9.83e-08 | 83 |
trunk mesenchyme | 1.17e-07 | 122 |
mesenchyme | 2.02e-07 | 160 |
entire embryonic mesenchyme | 2.02e-07 | 160 |
mesenchyme of umbilical cord | 2.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.44e-07 | 14 |