FFCP PHASE1:Hg19::chr8:42033607..42033639,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:42033607..42033639,-
|short_description=p@chr8:42033607..42033639,-
|description=CAGE_peak_at_chr8:42033607..42033639,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:42033607..42033639,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_at_chr8:42033607..42033639,- | |||
|id=chr8:42033607..42033639,- | |||
|ontology_enrichment_celltype=CL:0000192!2.46e-15!42;CL:0000514!2.46e-15!42;CL:0000183!1.33e-14!59;CL:0000359!1.29e-13!32;CL:0000680!1.36e-13!57;CL:0000056!1.36e-13!57;CL:0000355!1.36e-13!57;CL:0000187!9.09e-13!54;CL:0000393!2.42e-10!60;CL:0000211!2.42e-10!60;CL:0000222!7.85e-10!119;CL:0000055!1.73e-09!180;CL:1000507!2.40e-08!12;CL:1000494!2.40e-08!12;CL:1000449!6.04e-08!16;CL:0002681!2.17e-07!13;CL:0002584!2.17e-07!13;CL:0002539!3.33e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000192;8.18e-13;43!CL:0002595;9.38e-12;5!CL:0000359;4.16e-10;32!CL:1000306;1.34e-08;4!CL:0002547;1.34e-08;4!CL:0002593;4.59e-08;2!CL:1000487;1.04e-07;2!CL:0000650;3.08e-07;2!CL:1000500;3.08e-07;2!CL:1000618;3.08e-07;2!CL:1001318;3.08e-07;2!CL:0002554;3.08e-07;2!CL:0002173;3.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.74e-16,43;CL:0000514,5.74e-16,43;CL:0000680,5.35e-14,58;CL:0000056,5.35e-14,58;CL:0000355,5.35e-14,58;CL:0000187,2.81e-13,55;CL:0002595,9.70e-12,5;CL:0000393,1.44e-11,61;CL:0000211,1.44e-11,61;CL:0000222,9.17e-11,121;CL:0000359,1.68e-10,32;CL:1000306,1.26e-08,4;CL:0002547,1.26e-08,4;CL:0002593,4.61e-08,2;CL:1000487,1.50e-07,2;CL:0002554,1.61e-07,2;CL:0000650,7.76e-07,2;CL:1000500,7.76e-07,2;CL:1000618,7.76e-07,2;CL:1001318,7.76e-07,2;CL:0002173,7.76e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;8.18e-13;43!CL:0000355;5.42e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;7.05e-12;3!DOID:127;7.05e-12;3!DOID:0060072;5.39e-09;4!DOID:2394;2.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.10e-12,3;DOID:127,7.10e-12,3;DOID:0060072,5.42e-09,4;DOID:2394,2.21e-08,14 | |||
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|phase1_expression=0.181678379270557,0.642301571672949,0.986680828671798,0,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.218441372130172,0.527533956456907,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.633152558322899,2.1185468930115,9.46560848471085,3.54668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0,0,0,0.352303495931295,0,0,0,0.61417158655884,0.103325781175765,1.18800285728205,0,1.82032272387605,1.43723628363248,0,0.250237039743928,0,0,0,0.300476117813194,0.567160915800105,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0.646584227275248,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0.16798212819886,0.708875486211932,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0.285826432630578,0.224262168690721,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0.791951872933429,4.22015127883421,1.74306691720059,1.49959486773086,0,0,0,0,1.14861935834114,1.42636905040718,1.30303176000821,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.306923946576125,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.177561725313127,0,2.59627214591811,0.232420756919918,0,2.00506470303285,0,1.60740227430449,0.546273504020151,1.70461739447251,0.451199612907412,0.308061348417659,0,1.46139224653261,0.316654886678627,0,0.850468526382578,0.431831832204279,0,1.08378575017541,1.00337954770971,0.254876273045038,1.66215201785745,0.895499018888713,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0.290033387828457,0,0.0890320356467374,0,0,0,0,0.464845549297286,14.7961803010401,1.3940745403212,0.308033580176089,0.532306030317022,0.869932992075073,1.11194531462352,0.143124886741991,0,0,0.190630193923825,0,0.855877976067841,1.59101623962968,0.78494864019923,0.179872457583315,1.92175920815238,1.41374882814824,1.81964233415984,0,0.421258456238981,0,5.60541026151954,2.11300293513511,1.09199929126389,4.3835683905651,3.39024349860728,0,5.30751180192976,7.45366504931397,0,0,0,0.30982349809975,0.563391205064483,0.286822704408103,0,0.35667105148125,1.41904425628239,0,0.987884678879706,0,2.0996083214699,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0.20453736500431,0,0.933118762985422,0.179736702294654,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.548167698587004,0,0,0,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0,0.104602846312333,0,0.866851769704557,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0.422401346077626,0.179287339332845,0,0,0,0,7.60199442455198,19.0128728064279,25.1472267284245,0,0,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,7.99903786973784,0,0,0.149254802886874,0.467426619694449,1.10961172300523,0,0,0,0.686520205190771,1.36107831386915,0.466311601748341,0.443565449968902,0.63718706865481,0,0,2.90294345488599,1.32920857278997,3.1304703708704,0.150257608997218,17.1362345475958,3.25496586563729,0,0.322231671127465,0.928067519756987,5.17524655308201,2.00013882331577,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0.358177682162975,0,0,3.53378291891762,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4499638188256,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,3.11166643269184,0,0,0,0.206686796501184,0.0634158101939068,0,0,2.4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| ||
|short_description=p@chr8:42033607..42033639,- | |||
}} | }} |
Latest revision as of 18:29, 31 July 2015
Short description: | p@chr8:42033607..42033639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:42033607..42033639, - |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.74e-16 | 43 |
smooth muscle myoblast | 5.74e-16 | 43 |
muscle precursor cell | 5.35e-14 | 58 |
myoblast | 5.35e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.35e-14 | 58 |
muscle cell | 2.81e-13 | 55 |
smooth muscle cell of the subclavian artery | 9.70e-12 | 5 |
electrically responsive cell | 1.44e-11 | 61 |
electrically active cell | 1.44e-11 | 61 |
mesodermal cell | 9.17e-11 | 121 |
vascular associated smooth muscle cell | 1.68e-10 | 32 |
fibroblast of tunica adventitia of artery | 1.26e-08 | 4 |
fibroblast of the aortic adventitia | 1.26e-08 | 4 |
smooth muscle cell of the internal thoracic artery | 4.61e-08 | 2 |
smooth muscle cell of prostate | 1.50e-07 | 2 |
fibroblast of lymphatic vessel | 1.61e-07 | 2 |
mesangial cell | 7.76e-07 | 2 |
kidney interstitial cell | 7.76e-07 | 2 |
juxtaglomerular complex cell | 7.76e-07 | 2 |
renal interstitial pericyte | 7.76e-07 | 2 |
extraglomerular mesangial cell | 7.76e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.10e-12 | 3 |
leiomyoma | 7.10e-12 | 3 |
benign neoplasm | 5.42e-09 | 4 |
ovarian cancer | 2.21e-08 | 14 |