FFCP PHASE1:Hg19::chr17:42733789..42733802,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284071 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26670 | |||
|TSSclassifier=strong | |||
|UniProt=C9JC06 | |||
|association_with_transcript=17bp_to_ENST00000425535_5end | |||
|cluster_id=chr17:42733789..42733802,+ | |||
|coexpression_cluster_id=C3639 | |||
|description=CAGE_peak_3_at_C17orf104_5end | |||
|id=chr17:42733789..42733802,+ | |||
|ontology_enrichment_celltype=CL:0000039!6.70e-10!7;CL:0000586!6.70e-10!7;CL:0002535!6.59e-09!2;CL:0002322!8.55e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.04e-24;7!CL:0000586;8.04e-24;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.73e-24,7;CL:0000586,7.73e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.90e-29;10!UBERON:0005564;1.90e-29;10 | |||
|ontology_enrichment_disease=DOID:0050687!5.07e-10!143;DOID:305!5.59e-09!106;DOID:162!1.48e-08!235;DOID:14566!3.09e-08!239;DOID:4362!1.03e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:5409;5.15e-19;4!DOID:1325;2.69e-11;7!DOID:3904;2.69e-11;7!DOID:3905;5.41e-09;9!DOID:3095;5.07e-08;22!DOID:2994;5.07e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,6.77e-19,4;DOID:1325,3.14e-11,7;DOID:3904,3.14e-11,7;DOID:3905,6.11e-09,9;DOID:3095,5.01e-08,22;DOID:2994,5.01e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.91e-13!8;UBERON:0003135!1.53e-09!11;UBERON:0006955!6.59e-09!2;UBERON:0004801!6.59e-09!2;UBERON:0000464!2.98e-08!104;UBERON:0003886!6.34e-08!63;UBERON:0002323!5.02e-07!46;UBERON:0002553!7.30e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.13e-36;8!UBERON:0003135;8.09e-27;11!UBERON:0000991;2.95e-14;21!UBERON:0003101;1.26e-13;22!UBERON:0000079;1.26e-13;22!UBERON:0002323;8.40e-12;45!UBERON:0001264;4.04e-08;10!UBERON:0002553;3.88e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.46e-37,8;UBERON:0003135,7.09e-27,11;UBERON:0000991,2.76e-14,21;UBERON:0009196,2.76e-14,21;UBERON:0009117,2.76e-14,21;UBERON:0005564,2.76e-14,21;UBERON:0002323,4.63e-14,46;UBERON:0004176,1.18e-13,22;UBERON:0003101,1.18e-13,22;UBERON:0000079,1.18e-13,22;UBERON:0004458,3.41e-13,49;UBERON:0003886,5.84e-12,54;UBERON:0002553,1.43e-10,61;UBERON:0001264,4.34e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662648841607426,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,1.3037684630641,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.751617097072463,0.207376382794494,1.32930774541437,0,0.313932918407225,1.19472429772959,0.284609546029793,0,0,0,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0.581207126840626,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,1.09940516745429,2.41540549706678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437062287854782,0,0,1.60330443159336,0.735159196278759,6.016980943017,6.28963195211387,4.28742608249886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3874554964103,0,0,0,0,0,0,0,0 | |||
|short_description=p3@C17orf104 | |||
}} |
Latest revision as of 22:13, 24 September 2015
Short description: | p3@C17orf104 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C17orf104_5end |
Coexpression cluster: | C3639_testis_testicular_small_epidermoid_choriocarcinoma_argyrophil_hereditary |
Association with transcript: | 17bp_to_ENST00000425535_5end |
EntrezGene: | C17orf104 |
HGNC: | 26670 |
UniProt: | C9JC06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.73e-24 | 7 |
germ cell | 7.73e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 9.46e-37 | 8 |
male reproductive organ | 7.09e-27 | 11 |
gonad | 2.76e-14 | 21 |
indifferent external genitalia | 2.76e-14 | 21 |
indifferent gonad | 2.76e-14 | 21 |
gonad primordium | 2.76e-14 | 21 |
body cavity | 4.63e-14 | 46 |
external genitalia | 1.18e-13 | 22 |
male organism | 1.18e-13 | 22 |
male reproductive system | 1.18e-13 | 22 |
body cavity or lining | 3.41e-13 | 49 |
body cavity precursor | 5.84e-12 | 54 |
anatomical cavity | 1.43e-10 | 61 |
pancreas | 4.34e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 6.77e-19 | 4 |
bronchus cancer | 3.14e-11 | 7 |
bronchogenic carcinoma | 3.14e-11 | 7 |
lung carcinoma | 6.11e-09 | 9 |
germ cell and embryonal cancer | 5.01e-08 | 22 |
germ cell cancer | 5.01e-08 | 22 |