FFCP PHASE1:Hg19::chr17:42276199..42276213,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:42276199..42276213,+ | |||
|description=CAGE_peak_at_chr17:42276199..42276213,+ | |||
|id=chr17:42276199..42276213,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.36e-14!254;CL:0002076!1.27e-11!43;CL:0000223!1.71e-08!59;CL:0002368!3.17e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.62e-12;42!CL:0002159;7.67e-09;14!CL:0002621;1.22e-08;3!CL:0000244;1.59e-07;4!CL:0000731;1.59e-07;4!CL:0002251;1.85e-07;20!CL:0000575;8.35e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.32e-14,42;CL:0000223,1.95e-09,58;CL:0002159,4.90e-09,14;CL:0000066,6.45e-09,253;CL:0002621,1.22e-08,3;CL:0000244,1.64e-07,4;CL:0000731,1.64e-07,4;CL:0002251,2.41e-07,20;CL:0000575,4.52e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.01e-11!106;DOID:299!2.74e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;1.56e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.35e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.90e-15!169;UBERON:0000925!3.90e-15!169;UBERON:0006595!3.90e-15!169;UBERON:0001004!6.44e-11!72;UBERON:0001007!8.45e-11!155;UBERON:0001555!8.45e-11!155;UBERON:0007026!8.45e-11!155;UBERON:0000065!2.57e-09!53;UBERON:0004921!3.76e-09!129;UBERON:0004185!3.76e-09!129;UBERON:0000077!2.29e-08!130;UBERON:0005911!2.30e-08!82;UBERON:0005153!5.31e-08!37;UBERON:0005178!2.76e-07!34;UBERON:0002224!2.76e-07!34;UBERON:0005181!7.10e-07!35;UBERON:0008947!8.46e-07!38;UBERON:0003258!8.46e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.18e-09;7!UBERON:0001173;1.18e-09;7!UBERON:0000058;1.62e-09;10!UBERON:0006947;5.07e-09;3!UBERON:0004054;5.07e-09;3!UBERON:0001949;1.22e-08;3!UBERON:0000486;4.85e-08;12!UBERON:0004921;2.99e-07;33!UBERON:0002394;7.43e-07;4!UBERON:0005904;7.43e-07;4!UBERON:0003928;7.43e-07;4!UBERON:0006562;7.66e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.72e-12,160;UBERON:0000925,5.72e-12,160;UBERON:0006595,5.72e-12,160;UBERON:0006947,3.73e-09,3;UBERON:0004054,3.73e-09,3;UBERON:0001949,1.22e-08,3;UBERON:0001007,2.62e-08,145;UBERON:0001555,2.62e-08,145;UBERON:0007026,2.62e-08,145;UBERON:0002294,1.85e-07,9;UBERON:0001173,1.85e-07,9;UBERON:0004912,1.85e-07,9;UBERON:0005904,5.93e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,2.09340350391728,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.328402357799783,0,0.393364276848904,0,0,0.919421224478927,0.90361775633475,0.739508020333575,0.0774672005803016,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0.436194716338694,0.755751887377619,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0.167186495390678,0.32592226663359,0,1.94826728407911,0,0,0.221533894583621,0.270803863765016,0.640456598628376,0.650296737799391,0.164437904603676,0.276350017785848,0.579606171470105,0.444859689486181,1.07016331235885,1.04535523804977,0.113309342697566,0,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.301150238155546,0.383959833463255,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.523916301990851,3.27865759463288,1.85392221392215,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0,1.15956511897978,1.63647672354501,1.43402297694502,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,1.97550513735526,0,1.40740561376283,1.38882667737794,0,0,0,0,0,0.144366447761074,0,0,11.8530659693891,15.4527509177077,0,0.234004265139238,0,0,1.34385702559088,2.83550194484773,0.447792613514241,0.581267877027924,1.15014803749563,0,0.176096868026452,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0.215714200818617,0.426910231213777,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,1.80455823272956,1.74953878978203,0,0,0.131124414959424,2.25599806453706,0.539107359730903,0,0,0,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,1.4875642382488,0.768760269460425,5.10450849978336,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,1.34060455107157,2.17781969722645,0.376575203107117,2.15252686335615,3.36942951335251,2.21715076768338,0.918893600827838,3.04468565539302,0.764637207142375,0.569647187174163,0.714695326373367,0.822724546172388,1.94541993357815,2.16012574895246,1.58625035258854,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0,0.111443384277478,0,0.23874448473769,1.18785872333055,1.22864280839693,0,0,0,0,0.211125408127993,0.19924798825107,1.65770349318689,0,0.20453736500431,0,0,1.61763032065188,1.25314822272926,0,0.394573622547734,0,0,0,0,0,0.7812832832557,0.524759999977174,0,0.796554137998498,0,0.472775363535873,0,0,0,0,0,0,0,0.295547618953547,0,0,2.09135616417905,0.538651809526579,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0.843992258112108,1.63232808159148,0,0,3.98104772431402,0.619202951523374,1.83309043480088,0,0,0,0,0,0,0,0.782658475728359,0.485560759068186,1.57833761139756,0,0,0,0,0,0,0,0,0,1.13843818411917,0,1.73559738335131,0.979923974143776,0.69647365264322,1.39781334593624,0.171986032471617,0.19351266257817,0.438535902517113,0.328461828212837,2.32773639572207,0,0.451961481561065,0,0,0.0633107959558787,1.75996244461323,1.12222348352147,0.85381197895741,0,0.576361668616424,0,0,0,0.124252535565433,0.471388069233591,0,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,0.338693328263138,0,0,0,0,0,0.899895566206002,1.5476039091159,0.121499113316049,8.05043250238239,0.236417121897595,1.04909176269996,0.211200673038813,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0.513260513652988,2.11444506695002,1.06787412567695,0.943225830597996,1.65695622138878,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.624902039810533,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0,0,0,0.389720617678777,0.265729680626726,0.163565394255844,0,0.245772908753719,0.633936370075881,0,0,0.688859918643263,0,0,0.559518030877778,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,1.10057159113007,0.115525666150338,0,0,0,0,0,0,0,0.327543835020193,2.36569737947272,0,0,0,0,0,1.09651553371436,0.992422356778588,0,4.08839768446705,0,0,0,0,0.354809480650555,0,0,0,0,0.472775363535873,0.444925607568277,1.17739639275771,0.157115589916002,0,0.913158720509496,0,0,0,0,0.581207126840626,0,0,0.207216164163037,0.17071847709395,0,3.01159151174194,0,0,2.54032230114557,0.9164274741762,0,0,0.559277158988962,1.3741032706134,1.70685094975177,0,0,0,1.45713297917742,0.233939463462106,0.397901550322736,0,0.79062257427272,0,0.452888530700021,0.926089897295336,0.655678681511872,0,0,0.942706188406504,0,0,0,0,0,0.257831551894309,0,1.60698544745092,0.352894871715692,0.962896400270019,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.151557396436479,0,0,0,1.27940389140589,1.1903221573187,0.258355639344024,0.434523000071005,0,0.318235791390825,0.404234377916439,0.653150243690884,0.684466602170562,1.14498490124799,1.72133292942423,0.99798106963804,0.569822880276821,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0,0.320568492303233 | |||
|short_description=p@chr17:42276199..42276213,+ | |||
}} |
Latest revision as of 17:20, 25 July 2015
Short description: | p@chr17:42276199..42276213, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42276199..42276213, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.32e-14 | 42 |
endodermal cell | 1.95e-09 | 58 |
general ecto-epithelial cell | 4.90e-09 | 14 |
epithelial cell | 6.45e-09 | 253 |
gingival epithelial cell | 1.22e-08 | 3 |
transitional epithelial cell | 1.64e-07 | 4 |
urothelial cell | 1.64e-07 | 4 |
epithelial cell of alimentary canal | 2.41e-07 | 20 |
corneal epithelial cell | 4.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.72e-12 | 160 |
endoderm | 5.72e-12 | 160 |
presumptive endoderm | 5.72e-12 | 160 |
male genital duct | 3.73e-09 | 3 |
internal male genitalia | 3.73e-09 | 3 |
gingival epithelium | 1.22e-08 | 3 |
digestive system | 2.62e-08 | 145 |
digestive tract | 2.62e-08 | 145 |
primitive gut | 2.62e-08 | 145 |
biliary system | 1.85e-07 | 9 |
biliary tree | 1.85e-07 | 9 |
biliary bud | 1.85e-07 | 9 |
duct of male reproductive system | 5.93e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.35e-09 | 25 |