FFCP PHASE1:Hg19::chr17:39680781..39680798,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3880 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6436 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=100bp_to_ENST00000471565_5end | |||
|cluster_id=chr17:39680781..39680798,- | |||
|coexpression_cluster_id=C2407 | |||
|description=CAGE_peak_2_at_KRT19_5end | |||
|id=chr17:39680781..39680798,- | |||
|ontology_enrichment_celltype=CL:0000066!1.81e-29!254;CL:0002076!2.14e-16!43;CL:0000223!1.48e-13!59;CL:0002368!1.32e-12!13;CL:0002202!2.23e-08!9;CL:0002632!2.23e-08!9;CL:1000507!2.76e-08!12;CL:1000494!2.76e-08!12;CL:0000077!3.57e-07!19;CL:1000497!4.97e-07!18;CL:0002518!4.97e-07!18;CL:1000449!5.43e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.06e-25;13!CL:0000349;5.96e-19;19!CL:0000077;1.20e-15;19!CL:0002202;2.75e-15;9!CL:0002632;2.75e-15;9!CL:0002076;6.66e-14;42!CL:0002328;6.67e-10;3!CL:0002541;1.86e-09;3!CL:0000307;2.65e-09;3!CL:0002577;6.20e-09;3!CL:0000244;1.73e-07;4!CL:0000731;1.73e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.73e-25,13;CL:0000066,1.05e-21,253;CL:0002076,5.51e-20,42;CL:0000349,5.35e-19,19;CL:0000077,9.55e-16,19;CL:0002202,3.87e-15,9;CL:0002632,3.87e-15,9;CL:0000223,4.47e-13,58;CL:0002328,5.97e-10,3;CL:0002541,2.31e-09,3;CL:0000068,4.29e-09,3;CL:0000069,4.29e-09,3;CL:0002577,4.29e-09,3;CL:0000307,4.29e-09,3;CL:0000377,4.29e-09,3;CL:0000076,1.63e-08,63;CL:0000244,1.68e-07,4;CL:0000731,1.68e-07,4;CL:0002536,9.59e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;2.65e-09;3!CL:0000223;3.04e-08;58 | |||
|ontology_enrichment_disease=DOID:305!5.72e-12!106;DOID:0050687!1.27e-07!143;DOID:299!3.73e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.88e-15!169;UBERON:0000925!3.88e-15!169;UBERON:0006595!3.88e-15!169;UBERON:0000464!5.76e-12!104;UBERON:0005631!5.57e-11!14;UBERON:0000158!5.57e-11!14;UBERON:0000466!7.76e-11!126;UBERON:0006554!1.36e-10!44;UBERON:0001008!3.60e-10!45;UBERON:0001007!4.30e-10!155;UBERON:0001555!4.30e-10!155;UBERON:0007026!4.30e-10!155;UBERON:0003064!2.26e-09!37;UBERON:0005911!7.16e-09!82;UBERON:0004921!1.20e-08!129;UBERON:0004185!1.20e-08!129;UBERON:0000077!1.33e-08!130;UBERON:0000058!1.52e-08!26;UBERON:0005177!2.15e-08!107;UBERON:0009773!2.76e-08!12;UBERON:0001231!2.76e-08!12;UBERON:0004810!2.76e-08!12;UBERON:0003124!2.83e-08!7;UBERON:0000080!2.95e-08!18;UBERON:0002120!2.95e-08!18;UBERON:0004875!2.95e-08!18;UBERON:0005721!2.95e-08!18;UBERON:0005754!2.95e-08!18;UBERON:0007297!2.95e-08!18;UBERON:0006555!1.14e-07!17;UBERON:0005103!1.14e-07!17;UBERON:0000083!1.14e-07!17;UBERON:0009201!1.14e-07!17;UBERON:0004819!1.14e-07!17;UBERON:0006553!1.14e-07!17;UBERON:0003074!1.14e-07!17;UBERON:0003060!1.14e-07!17;UBERON:0001004!1.24e-07!72;UBERON:0000065!1.43e-07!53;UBERON:0004876!4.86e-07!20;UBERON:0004211!5.43e-07!16;UBERON:0001285!5.43e-07!16;UBERON:0007684!5.43e-07!16;UBERON:0003220!5.43e-07!16;UBERON:0004208!5.43e-07!16;UBERON:0007196!5.43e-07!14;UBERON:0001558!5.43e-07!14;UBERON:0005178!5.96e-07!34;UBERON:0002224!5.96e-07!34;UBERON:0000478!6.44e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.69e-17;10!UBERON:0000158;1.69e-17;10!UBERON:0000478;2.09e-14;24!UBERON:0000305;2.97e-10;7!UBERON:0004815;6.67e-10;3!UBERON:0002031;6.67e-10;3!UBERON:0003124;1.86e-09;3!UBERON:0000920;1.86e-09;3!UBERON:0007196;1.05e-08;15!UBERON:0001558;1.05e-08;15!UBERON:0005178;4.76e-08;34!UBERON:0002224;4.76e-08;34!UBERON:0005181;7.73e-07;35!UBERON:0001987;8.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.35e-22,14;UBERON:0000158,1.35e-22,14;UBERON:0000478,1.93e-14,24;UBERON:0003124,2.96e-14,7;UBERON:0000305,3.46e-10,7;UBERON:0004815,5.97e-10,3;UBERON:0002031,5.97e-10,3;UBERON:0000920,2.31e-09,3;UBERON:0004871,7.31e-09,8;UBERON:0007196,1.27e-08,15;UBERON:0001558,1.27e-08,15;UBERON:0000065,2.71e-08,54;UBERON:0004119,5.41e-08,160;UBERON:0000925,5.41e-08,160;UBERON:0006595,5.41e-08,160;UBERON:0005178,8.12e-08,34;UBERON:0002224,8.12e-08,34;UBERON:0005181,1.58e-07,35;UBERON:0006554,1.89e-07,47;UBERON:0001008,3.09e-07,48;UBERON:0001004,6.47e-07,74;UBERON:0001987,6.57e-07,4;UBERON:0004340,6.57e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,12.5604210235037,2.40285509343189,2.90143676051299,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,3.67768489791571,5.72291245678675,4.43704812200145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,1.45718115317017,2.59549109949101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.876933046450788,0.252433774244115,0,0,0,0.403008392910561,0,0.966304265816484,0.545492241181669,0,0.243947412259191,0.530119073285941,1.2781333715647,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,1.75918045801206,0,0,2.88662684050547,0,0,0,0,0,3.95102198979638,0,0,0,0,0.93733833986777,0.503946384596579,0.567100388969546,0,0,0,0,0,0,0,0.25248486685276,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,1.64648067356154,0,0,0.791951872933429,2.71295439353627,1.74306691720059,3.99891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0.713715955188647,0,0,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,1.5156378572313,1.66435439510497,5.14063498660456,0,0,0,0.128139149255701,0,0,0,0.308419387605311,0.355123450626254,0.246381468041427,0,0.232420756919918,0.725156697549733,7.21823293091825,1.56537681191024,0.114814448164607,0.364182336013434,0.262248829918848,1.35359883872224,0.462092022626489,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,5.51858751240339,0.254876273045038,3.3243040357149,0.671624264166535,0,0,0.769350375349168,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,4.13212288402445,3.2672311452068,3.44554323735377,2.12431339796655,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.286822704408103,0.294747123039363,0,0.354761064070598,0,0,0,0,1.15466535270614,11.3951386841084,2.17781969722645,0.282431402330337,2.58303223602738,6.73885902670502,5.76459199597678,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,4.29740072527842,1.18785872333055,6.14321404198464,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0.629078458031288,0.895105873378046,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0,0,1.2517279311405,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.67308493134324,0.0769502585037971,0,0.23056390438806,0.179515288819544,1.19512109114209,5.10401855571071,1.28236630762607,4.79731298416771,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0,0,0.424059214301822,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,0,0,0,1.73559738335131,0,0.957651272384428,0.698906672968121,0,0,0.219267951258557,0.246346371159628,0.193978032976839,0,0.677942222341597,0,0,0,0.977756913674015,0.400794101257669,1.49417096317547,5.79447867788178,0.576361668616424,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.79711100449092,0,0,0,0,0,0.157566364614447,0.824158583811665,0.539228350833479,0,0,0,0,0.482259445395058,0,0,0,0,0,0,0,0.104909176269996,0,3.04788476865836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40963004463334,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,2.82318983637806,0.468334905806882,0.869526171664951,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0.521745061811734,1.50257608997218,1.90402606084398,0,0,1.39633724155235,0,0.398095888698616,0,0,0,0,0,2.14441591374926,0,0.906823702049089,2.77826969188601,0,2.8654214573038,4.32322026025361,1.53498834705095,2.12026975135057,3.27953865060555,1.35153952522458,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,3.30171477339022,0.462102664601353,0,0,0,0,0,0,0,0.327543835020193,1.03499260351932,0,0,0,0,0,0.548257766857182,0,0,0.383287282918786,0,0,0,0,0.266107110487916,0,0,0,0,0,0.444925607568277,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,4.1239236337929,0,0,0.335566295393377,0.196300467230486,1.34109717480496,0,0,1.1598144313382,0.971421986118279,0,0.198950775161368,0,0,0,0.603851374266694,0.463044948647668,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0.705789743431384,0.561689566824178,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0.506794004045748,0.305966489225945,0,0.0918948995348449,0,0,0,0,0,0.639701945702943,0.23806443146374,0,0.186224142887574,0.112131862580613,0,0,0.217716747896961,0.342233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| |||
|short_description=p2@KRT19 | |||
}} |
Latest revision as of 05:57, 20 September 2015
Short description: | p2@KRT19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KRT19_5end |
Coexpression cluster: | C2407_Alveolar_Tracheal_Small_Bronchial_MCF7_Amniotic_Renal |
Association with transcript: | 100bp_to_ENST00000471565_5end |
EntrezGene: | KRT19 |
HGNC: | 6436 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.73e-25 | 13 |
epithelial cell | 1.05e-21 | 253 |
endo-epithelial cell | 5.51e-20 | 42 |
extraembryonic cell | 5.35e-19 | 19 |
mesothelial cell | 9.55e-16 | 19 |
epithelial cell of tracheobronchial tree | 3.87e-15 | 9 |
epithelial cell of lower respiratory tract | 3.87e-15 | 9 |
endodermal cell | 4.47e-13 | 58 |
bronchial epithelial cell | 5.97e-10 | 3 |
chorionic membrane mesenchymal stem cell | 2.31e-09 | 3 |
duct epithelial cell | 4.29e-09 | 3 |
branched duct epithelial cell | 4.29e-09 | 3 |
placental epithelial cell | 4.29e-09 | 3 |
tracheal epithelial cell | 4.29e-09 | 3 |
tracheoblast | 4.29e-09 | 3 |
squamous epithelial cell | 1.63e-08 | 63 |
transitional epithelial cell | 1.68e-07 | 4 |
urothelial cell | 1.68e-07 | 4 |
amniotic epithelial cell | 9.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.35e-22 | 14 |
membranous layer | 1.35e-22 | 14 |
extraembryonic structure | 1.93e-14 | 24 |
chorion | 2.96e-14 | 7 |
amnion | 3.46e-10 | 7 |
lower respiratory tract epithelium | 5.97e-10 | 3 |
epithelium of bronchus | 5.97e-10 | 3 |
egg chorion | 2.31e-09 | 3 |
somatic layer of lateral plate mesoderm | 7.31e-09 | 8 |
tracheobronchial tree | 1.27e-08 | 15 |
lower respiratory tract | 1.27e-08 | 15 |
respiratory tract | 2.71e-08 | 54 |
endoderm-derived structure | 5.41e-08 | 160 |
endoderm | 5.41e-08 | 160 |
presumptive endoderm | 5.41e-08 | 160 |
thoracic cavity element | 8.12e-08 | 34 |
thoracic cavity | 8.12e-08 | 34 |
thoracic segment organ | 1.58e-07 | 35 |
urinary system structure | 1.89e-07 | 47 |
renal system | 3.09e-07 | 48 |
respiratory system | 6.47e-07 | 74 |
placenta | 6.57e-07 | 4 |
allantois | 6.57e-07 | 4 |