FFCP PHASE1:Hg19::chr17:38938796..38938803,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=342574 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30841 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z3Y8 | |||
|association_with_transcript=-10bp_to_ENST00000301656,NM_181537,uc002hvg.2_5end | |||
|cluster_id=chr17:38938796..38938803,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT27_5end | |||
|id=chr17:38938796..38938803,- | |||
|ontology_enrichment_celltype=CL:0000312!3.35e-12!5;CL:0002159!2.20e-10!13;CL:0000240!2.52e-10!6;CL:0000311!2.52e-10!6;CL:0000079!2.52e-10!6;CL:0000237!2.52e-10!6;CL:0000036!2.52e-10!6;CL:0000357!2.52e-10!6;CL:0000114!2.52e-10!6;CL:0000575!1.86e-08!2;CL:0000362!5.76e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1 | |||
|ontology_enrichment_disease=DOID:178!1.16e-15!1;DOID:326!1.16e-15!1;DOID:3978!1.16e-15!1;DOID:3394!1.16e-15!1;DOID:5844!1.16e-15!1;DOID:3151!1.54e-15!1;DOID:3149!1.54e-15!1;DOID:114!1.73e-08!2;DOID:3451!2.00e-08!2;DOID:4159!2.00e-08!2;DOID:0060122!2.00e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007029!5.56e-16!1;UBERON:0002426!7.46e-16!1;UBERON:0003831!7.46e-16!1;UBERON:0003898!7.46e-16!1;UBERON:0004830!7.46e-16!1;UBERON:0001774!7.46e-16!1;UBERON:0003830!7.46e-16!1;UBERON:0005175!7.46e-16!1;UBERON:0003897!7.46e-16!1;UBERON:0001103!7.46e-16!1;UBERON:0010084!7.46e-16!1;UBERON:0000014!2.22e-15!4;UBERON:0001882!3.17e-15!1;UBERON:0005403!3.17e-15!1;UBERON:0002370!7.47e-15!4;UBERON:0005058!7.47e-15!4;UBERON:0009113!7.47e-15!4;UBERON:0003295!7.47e-15!4;UBERON:0005562!7.47e-15!4;UBERON:0003351!3.19e-10!6;UBERON:0001003!9.24e-10!14;UBERON:0007376!9.24e-10!14;UBERON:0007383!9.24e-10!14;UBERON:0004177!6.83e-09!7;UBERON:0001630!1.39e-08!2;UBERON:0005090!1.39e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.23e-66;1!UBERON:0002426;4.66e-66;1!UBERON:0003831;4.66e-66;1!UBERON:0003898;4.66e-66;1!UBERON:0004830;4.66e-66;1!UBERON:0003830;4.66e-66;1!UBERON:0005175;4.66e-66;1!UBERON:0001774;4.66e-66;1!UBERON:0001103;4.66e-66;1!UBERON:0005090;7.05e-34;2!UBERON:0001630;7.05e-34;2!UBERON:0000014;7.35e-18;4!UBERON:0000922;1.35e-08;49!UBERON:0002331;6.13e-08;10!UBERON:0001443;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.23e-66,1;UBERON:0002426,4.66e-66,1;UBERON:0003831,4.66e-66,1;UBERON:0003898,4.66e-66,1;UBERON:0004830,4.66e-66,1;UBERON:0003830,4.66e-66,1;UBERON:0005175,4.66e-66,1;UBERON:0001774,4.66e-66,1;UBERON:0001103,4.66e-66,1;UBERON:0010084,4.66e-66,1;UBERON:0005090,7.05e-34,2;UBERON:0001630,7.05e-34,2;UBERON:0000014,7.35e-18,4;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10;UBERON:0001443,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,113.170661382779,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p1@KRT27 | |||
}} |
Latest revision as of 03:23, 20 September 2015
Short description: | p1@KRT27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT27_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -10bp_to_ENST00000301656, NM_181537, uc002hvg.2_5end |
EntrezGene: | KRT27 |
HGNC: | 30841 |
UniProt: | Q7Z3Y8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 1.23e-66 | 1 |
chest muscle | 4.66e-66 | 1 |
respiratory system muscle | 4.66e-66 | 1 |
skeletal muscle of trunk | 4.66e-66 | 1 |
respiratory system skeletal muscle | 4.66e-66 | 1 |
thoracic segment muscle | 4.66e-66 | 1 |
chest organ | 4.66e-66 | 1 |
muscle of trunk | 4.66e-66 | 1 |
diaphragm | 4.66e-66 | 1 |
future diaphragm | 4.66e-66 | 1 |
muscle structure | 7.05e-34 | 2 |
muscle organ | 7.05e-34 | 2 |
zone of skin | 7.35e-18 | 4 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |
chest | 2.63e-07 | 11 |