FFCP PHASE1:Hg19::chr17:32583753..32583906,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:32583753..32583906,+ | |||
|coexpression_cluster_id=C874 | |||
|description=CAGE_peak_at_chr17:32583753..32583906,+ | |||
|id=chr17:32583753..32583906,+ | |||
|ontology_enrichment_celltype=CL:0000222!8.12e-17!119;CL:0000680!1.13e-16!57;CL:0000056!1.13e-16!57;CL:0000355!1.13e-16!57;CL:0000187!2.04e-16!54;CL:0000393!4.32e-16!60;CL:0000211!4.32e-16!60;CL:0000359!3.75e-15!32;CL:0000192!1.28e-14!42;CL:0000514!1.28e-14!42;CL:0000183!6.07e-14!59;CL:0002057!1.61e-11!42;CL:0000055!2.95e-11!180;CL:0000860!8.49e-10!45;CL:0000839!1.15e-09!70;CL:0002194!2.25e-09!63;CL:0000576!2.25e-09!63;CL:0000040!2.25e-09!63;CL:0000559!2.25e-09!63;CL:0000557!2.76e-09!71;CL:0000048!1.09e-08!430;CL:0002009!1.35e-08!65;CL:0000766!5.33e-08!76;CL:0000723!7.79e-08!436;CL:0002494!1.60e-07!16;CL:0002539!3.08e-07!10;CL:0000034!3.89e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.94e-24;39!CL:0000234;4.94e-24;39!CL:0000860;5.30e-23;33!CL:0002057;5.30e-23;33!CL:0000359;6.52e-19;32!CL:0000192;2.96e-11;43!CL:0002539;4.33e-10;10!CL:0002494;6.72e-10;16!CL:0000576;4.44e-09;48!CL:0000393;2.88e-08;61!CL:0000211;2.88e-08;61!CL:0000235;5.85e-08;6!CL:0000187;1.50e-07;55!CL:0000766;1.60e-07;69!CL:0002595;9.26e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.31e-23,48;CL:0000234,6.31e-23,48;CL:0000359,3.85e-20,32;CL:0000860,2.48e-17,42;CL:0002057,2.48e-17,42;CL:0000048,3.23e-16,427;CL:0002194,9.91e-16,59;CL:0000576,9.91e-16,59;CL:0000040,9.91e-16,59;CL:0000559,9.91e-16,59;CL:0000723,1.96e-15,433;CL:0000839,6.91e-15,66;CL:0002009,8.02e-15,61;CL:0000192,9.47e-15,43;CL:0000514,9.47e-15,43;CL:0000393,1.25e-14,61;CL:0000211,1.25e-14,61;CL:0000557,1.77e-14,67;CL:0000034,1.98e-14,441;CL:0000187,7.17e-14,55;CL:0000680,2.35e-13,58;CL:0000056,2.35e-13,58;CL:0000355,2.35e-13,58;CL:0000222,3.31e-13,121;CL:0000766,1.26e-12,72;CL:0002539,3.44e-10,10;CL:0002494,5.62e-10,16;CL:0000235,6.32e-08,6;CL:0002595,8.98e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-13;42!CL:0000514;2.96e-11;43!CL:0000355;2.30e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.20e-19!167;UBERON:0004872!1.24e-19!84;UBERON:0002049!5.93e-19!79;UBERON:0007798!5.93e-19!79;UBERON:0000055!9.47e-19!69;UBERON:0001981!1.20e-17!60;UBERON:0007500!1.20e-17!60;UBERON:0004537!1.20e-17!60;UBERON:0006965!1.20e-17!60;UBERON:0001009!6.10e-17!113;UBERON:0001637!6.39e-17!42;UBERON:0003509!6.39e-17!42;UBERON:0004572!6.39e-17!42;UBERON:0004535!6.86e-17!110;UBERON:0001134!8.48e-16!61;UBERON:0002036!8.48e-16!61;UBERON:0003082!8.48e-16!61;UBERON:0002385!2.61e-15!63;UBERON:0001015!2.61e-15!63;UBERON:0000383!2.61e-15!63;UBERON:0003081!3.64e-15!216;UBERON:0004290!5.05e-15!70;UBERON:0004573!1.55e-14!33;UBERON:0004571!1.55e-14!33;UBERON:0000486!8.34e-12!82;UBERON:0000467!1.72e-11!625;UBERON:0000914!1.76e-11!83;UBERON:0002329!1.76e-11!83;UBERON:0003077!1.76e-11!83;UBERON:0003059!1.76e-11!83;UBERON:0007282!1.76e-11!83;UBERON:0009618!1.76e-11!83;UBERON:0007285!1.76e-11!83;UBERON:0000480!2.51e-11!626;UBERON:0003914!4.64e-11!118;UBERON:0000025!9.35e-09!194;UBERON:0000948!1.07e-08!24;UBERON:0005498!1.07e-08!24;UBERON:0004140!1.07e-08!24;UBERON:0009881!1.07e-08!24;UBERON:0004141!1.07e-08!24;UBERON:0003084!1.07e-08!24;UBERON:0007005!1.07e-08!24;UBERON:0004139!1.07e-08!24;UBERON:0004291!1.07e-08!24;UBERON:0002371!1.45e-08!80;UBERON:0007100!1.89e-08!27;UBERON:0000468!2.05e-08!659;UBERON:0000926!2.08e-08!448;UBERON:0004120!2.08e-08!448;UBERON:0006603!2.08e-08!448;UBERON:0004111!4.76e-08!241;UBERON:0000490!5.00e-08!138;UBERON:0000477!1.49e-07!286;UBERON:0000947!1.72e-07!21;UBERON:0010191!1.72e-07!21;UBERON:0002050!2.54e-07!605;UBERON:0005423!2.54e-07!605;UBERON:0000922!2.88e-07!612;UBERON:0004237!3.08e-07!10;UBERON:0004695!3.08e-07!10;UBERON:0002111!3.08e-07!10;UBERON:0004178!3.08e-07!10;UBERON:0002405!3.20e-07!115;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0001474!8.56e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.32e-15;33!UBERON:0004571;1.32e-15;33!UBERON:0001637;1.77e-13;42!UBERON:0003509;1.77e-13;42!UBERON:0004572;1.77e-13;42!UBERON:0004237;4.33e-10;10!UBERON:0004695;4.33e-10;10!UBERON:0002111;4.33e-10;10!UBERON:0004178;4.33e-10;10!UBERON:0000948;5.85e-10;22!UBERON:0000055;2.23e-09;65!UBERON:0007100;3.66e-09;25!UBERON:0007500;1.27e-08;56!UBERON:0001981;1.27e-08;56!UBERON:0004537;1.27e-08;56!UBERON:0000947;1.70e-07;21!UBERON:0010191;1.70e-07;21!UBERON:0002049;5.85e-07;75!UBERON:0007798;5.85e-07;75!UBERON:0003834;9.26e-07;5!UBERON:0001533;9.26e-07;5 | |||
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| |||
|short_description=p@chr17:32583753..32583906,+ | |||
}} |
Latest revision as of 15:33, 25 July 2015
Short description: | p@chr17:32583753..32583906, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:32583753..32583906, + |
Coexpression cluster: | C874_Monocytederived_CD14_Mast_Lymphatic_Smooth_Neurons_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.31e-23 | 48 |
phagocyte | 6.31e-23 | 48 |
vascular associated smooth muscle cell | 3.85e-20 | 32 |
classical monocyte | 2.48e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.48e-17 | 42 |
multi fate stem cell | 3.23e-16 | 427 |
monopoietic cell | 9.91e-16 | 59 |
monocyte | 9.91e-16 | 59 |
monoblast | 9.91e-16 | 59 |
promonocyte | 9.91e-16 | 59 |
somatic stem cell | 1.96e-15 | 433 |
myeloid lineage restricted progenitor cell | 6.91e-15 | 66 |
macrophage dendritic cell progenitor | 8.02e-15 | 61 |
smooth muscle cell | 9.47e-15 | 43 |
smooth muscle myoblast | 9.47e-15 | 43 |
electrically responsive cell | 1.25e-14 | 61 |
electrically active cell | 1.25e-14 | 61 |
granulocyte monocyte progenitor cell | 1.77e-14 | 67 |
stem cell | 1.98e-14 | 441 |
muscle cell | 7.17e-14 | 55 |
muscle precursor cell | 2.35e-13 | 58 |
myoblast | 2.35e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.35e-13 | 58 |
mesodermal cell | 3.31e-13 | 121 |
myeloid leukocyte | 1.26e-12 | 72 |
aortic smooth muscle cell | 3.44e-10 | 10 |
cardiocyte | 5.62e-10 | 16 |
macrophage | 6.32e-08 | 6 |
smooth muscle cell of the subclavian artery | 8.98e-07 | 5 |