FFCP PHASE1:Hg19::chr17:27278445..27278575,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57649 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20816 | |||
|TSSclassifier=strong | |||
|UniProt=C9J9G2,Q96QT6 | |||
|association_with_transcript=0bp_to_ENST00000268756,ENST00000378879,NM_001033561,NM_020889,uc002hdg.1,uc002hdi.1,uc002hdj.1,uc002hdk.1,uc010crw.1_5end | |||
|cluster_id=chr17:27278445..27278575,- | |||
|description=CAGE_peak_1_at_PHF12_5end | |||
|id=chr17:27278445..27278575,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.00e-33!115;UBERON:0001049!6.72e-14!57;UBERON:0005068!6.72e-14!57;UBERON:0006241!6.72e-14!57;UBERON:0007135!6.72e-14!57;UBERON:0002616!2.31e-12!59;UBERON:0000955!2.73e-12!69;UBERON:0006238!2.73e-12!69;UBERON:0001017!1.96e-11!82;UBERON:0003080!2.49e-11!42;UBERON:0002780!6.64e-11!41;UBERON:0001890!6.64e-11!41;UBERON:0006240!6.64e-11!41;UBERON:0005743!1.51e-10!86;UBERON:0003075!5.70e-10!86;UBERON:0007284!5.70e-10!86;UBERON:0002346!1.67e-09!90;UBERON:0000073!1.97e-09!94;UBERON:0001016!1.97e-09!94;UBERON:0002020!4.67e-09!34;UBERON:0003528!4.67e-09!34;UBERON:0001893!5.79e-09!34;UBERON:0002791!7.82e-09!33;UBERON:0003056!4.21e-08!61;UBERON:0001869!5.55e-08!32;UBERON:0000153!2.64e-07!129;UBERON:0007811!2.64e-07!129;UBERON:0002619!9.48e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.08e-09;114!UBERON:0002780;1.81e-08;41!UBERON:0001890;1.81e-08;41!UBERON:0000073;3.40e-08;53!UBERON:0002616;3.40e-08;53!UBERON:0001893;7.68e-08;34!UBERON:0003528;1.36e-07;34!UBERON:0002020;1.36e-07;34!UBERON:0002791;1.60e-07;32!UBERON:0001869;3.44e-07;32!UBERON:0000178;7.18e-07;15!UBERON:0000179;7.18e-07;15!UBERON:0000463;7.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-32,114;UBERON:0001049,1.80e-13,56;UBERON:0005068,1.80e-13,56;UBERON:0006241,1.80e-13,56;UBERON:0007135,1.80e-13,56;UBERON:0000073,3.12e-13,53;UBERON:0002616,3.12e-13,53;UBERON:0000955,6.74e-12,68;UBERON:0006238,6.74e-12,68;UBERON:0001017,4.57e-11,81;UBERON:0002780,6.64e-11,41;UBERON:0001890,6.64e-11,41;UBERON:0003080,6.64e-11,41;UBERON:0006240,6.64e-11,41;UBERON:0003075,2.55e-10,82;UBERON:0007284,2.55e-10,82;UBERON:0001016,7.66e-10,89;UBERON:0002346,8.10e-10,86;UBERON:0003528,4.67e-09,34;UBERON:0002020,4.67e-09,34;UBERON:0001893,5.79e-09,34;UBERON:0002791,2.39e-08,32;UBERON:0010371,2.98e-08,104;UBERON:0001869,5.55e-08,32;UBERON:0003056,6.28e-08,61;UBERON:0002619,9.48e-07,22 | |||
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| |||
|short_description=p1@PHF12 | |||
}} |
Latest revision as of 07:54, 19 September 2015
Short description: | p1@PHF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHF12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000268756, ENST00000378879, NM_001033561, NM_020889, uc002hdg.1, uc002hdi.1, uc002hdj.1, uc002hdk.1, uc010crw.1_5end |
EntrezGene: | PHF12 |
HGNC: | 20816 |
UniProt: | C9J9G2Q96QT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.14e-32 | 114 |
neural tube | 1.80e-13 | 56 |
neural rod | 1.80e-13 | 56 |
future spinal cord | 1.80e-13 | 56 |
neural keel | 1.80e-13 | 56 |
regional part of nervous system | 3.12e-13 | 53 |
regional part of brain | 3.12e-13 | 53 |
brain | 6.74e-12 | 68 |
future brain | 6.74e-12 | 68 |
central nervous system | 4.57e-11 | 81 |
regional part of forebrain | 6.64e-11 | 41 |
forebrain | 6.64e-11 | 41 |
anterior neural tube | 6.64e-11 | 41 |
future forebrain | 6.64e-11 | 41 |
neural plate | 2.55e-10 | 82 |
presumptive neural plate | 2.55e-10 | 82 |
nervous system | 7.66e-10 | 89 |
neurectoderm | 8.10e-10 | 86 |
brain grey matter | 4.67e-09 | 34 |
gray matter | 4.67e-09 | 34 |
telencephalon | 5.79e-09 | 34 |
regional part of telencephalon | 2.39e-08 | 32 |
ecto-epithelium | 2.98e-08 | 104 |
cerebral hemisphere | 5.55e-08 | 32 |
pre-chordal neural plate | 6.28e-08 | 61 |
regional part of cerebral cortex | 9.48e-07 | 22 |