FFCP PHASE1:Hg19::chr17:27044525..27044543,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83871 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=181bp_to_ENST00000483554_5end | |||
|cluster_id=chr17:27044525..27044543,- | |||
|coexpression_cluster_id=C3621 | |||
|description=CAGE_peak_6_at_RAB34_5end | |||
|id=chr17:27044525..27044543,- | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-36!180;CL:0000183!3.77e-23!59;CL:0000222!5.49e-21!119;CL:0000680!9.38e-21!57;CL:0000056!9.38e-21!57;CL:0000355!9.38e-21!57;CL:0000187!1.03e-20!54;CL:0002321!3.74e-20!248;CL:0000220!9.99e-20!246;CL:0000393!2.32e-19!60;CL:0000211!2.32e-19!60;CL:0000192!4.53e-18!42;CL:0000514!4.53e-18!42;CL:0000012!2.65e-17!682;CL:0000548!7.24e-17!679;CL:0000004!7.24e-17!679;CL:0000255!7.24e-17!679;CL:0000359!2.74e-15!32;CL:0000144!1.58e-12!625;CL:0000057!1.25e-11!75;CL:0002371!2.46e-08!591;CL:0000003!7.24e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.72e-16;32!CL:0000192;1.36e-14;43!CL:0000187;1.05e-12;55!CL:0000393;4.75e-11;61!CL:0000211;4.75e-11;61!CL:0002494;2.42e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.16e-23,58;CL:0000056,1.16e-23,58;CL:0000355,1.16e-23,58;CL:0000187,1.29e-23,55;CL:0000393,1.28e-22,61;CL:0000211,1.28e-22,61;CL:0000222,2.24e-22,121;CL:0000192,2.67e-20,43;CL:0000514,2.67e-20,43;CL:0002321,8.65e-20,250;CL:0000359,4.01e-17,32;CL:0000057,5.68e-11,76;CL:0002494,2.92e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;1.36e-14;43!CL:0000355;1.29e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.86e-20!70;UBERON:0000914!2.01e-19!83;UBERON:0002329!2.01e-19!83;UBERON:0003077!2.01e-19!83;UBERON:0003059!2.01e-19!83;UBERON:0007282!2.01e-19!83;UBERON:0009618!2.01e-19!83;UBERON:0007285!2.01e-19!83;UBERON:0000486!3.91e-18!82;UBERON:0001134!4.24e-18!61;UBERON:0002036!4.24e-18!61;UBERON:0003082!4.24e-18!61;UBERON:0002385!2.04e-17!63;UBERON:0001015!2.04e-17!63;UBERON:0000383!2.04e-17!63;UBERON:0005256!1.36e-16!143;UBERON:0003104!2.39e-16!238;UBERON:0009142!2.39e-16!238;UBERON:0002100!1.46e-14!216;UBERON:0000481!2.55e-13!347;UBERON:0002049!5.24e-12!79;UBERON:0007798!5.24e-12!79;UBERON:0004872!6.57e-12!84;UBERON:0001637!4.68e-11!42;UBERON:0003509!4.68e-11!42;UBERON:0004572!4.68e-11!42;UBERON:0003914!9.17e-11!118;UBERON:0001981!8.94e-10!60;UBERON:0007500!8.94e-10!60;UBERON:0004537!8.94e-10!60;UBERON:0006965!8.94e-10!60;UBERON:0000490!1.08e-09!138;UBERON:0000475!9.01e-09!365;UBERON:0004573!1.65e-08!33;UBERON:0004571!1.65e-08!33;UBERON:0000055!5.22e-08!69;UBERON:0004535!1.03e-07!110;UBERON:0000119!3.93e-07!312;UBERON:0001009!4.84e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.64e-08;33!UBERON:0004571;1.64e-08;33!UBERON:0001637;2.84e-08;42!UBERON:0003509;2.84e-08;42!UBERON:0004572;2.84e-08;42!UBERON:0003914;3.60e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.81e-26,78;UBERON:0002329,4.19e-23,71;UBERON:0003059,4.19e-23,71;UBERON:0007282,4.19e-23,71;UBERON:0004290,4.19e-23,71;UBERON:0009618,4.19e-23,71;UBERON:0007524,5.90e-23,73;UBERON:0003077,2.32e-22,72;UBERON:0007285,2.32e-22,72;UBERON:0001134,4.52e-21,62;UBERON:0002036,4.52e-21,62;UBERON:0003082,4.52e-21,62;UBERON:0003104,2.21e-20,160;UBERON:0009142,2.21e-20,160;UBERON:0002385,1.41e-19,64;UBERON:0001015,1.41e-19,64;UBERON:0000383,1.41e-19,64;UBERON:0000486,2.36e-19,83;UBERON:0005256,7.30e-17,122;UBERON:0002100,3.76e-15,199;UBERON:0000490,1.07e-13,148;UBERON:0004872,6.03e-13,83;UBERON:0003914,2.57e-12,117;UBERON:0002049,3.21e-12,78;UBERON:0007798,3.21e-12,78;UBERON:0001637,3.49e-12,42;UBERON:0003509,3.49e-12,42;UBERON:0004572,3.49e-12,42;UBERON:0007500,4.75e-10,59;UBERON:0001981,4.75e-10,59;UBERON:0004537,4.75e-10,59;UBERON:0006965,4.75e-10,59;UBERON:0004535,1.51e-09,109;UBERON:0004573,1.55e-09,33;UBERON:0004571,1.55e-09,33;UBERON:0001009,1.15e-08,112;UBERON:0000119,4.22e-08,309;UBERON:0000055,5.17e-08,68;UBERON:0000483,1.51e-07,306 | |||
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| |||
|short_description=p6@RAB34 | |||
}} |
Latest revision as of 06:58, 19 September 2015
Short description: | p6@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RAB34_5end |
Coexpression cluster: | C3621_Hepatic_Renal_Alveolar_Mesenchymal_Trabecular_Smooth_normal |
Association with transcript: | 181bp_to_ENST00000483554_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.16e-23 | 58 |
myoblast | 1.16e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-23 | 58 |
muscle cell | 1.29e-23 | 55 |
electrically responsive cell | 1.28e-22 | 61 |
electrically active cell | 1.28e-22 | 61 |
mesodermal cell | 2.24e-22 | 121 |
smooth muscle cell | 2.67e-20 | 43 |
smooth muscle myoblast | 2.67e-20 | 43 |
embryonic cell | 8.65e-20 | 250 |
vascular associated smooth muscle cell | 4.01e-17 | 32 |
fibroblast | 5.68e-11 | 76 |
cardiocyte | 2.92e-07 | 16 |