FFCP PHASE1:Hg19::chr8:38585926..38585943,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:38585926..38585943,+
|short_description=p16@TACC1
|description=CAGE_peak_16_at_TACC1_5end
|association_with_transcript=64bp_to_ENST00000522474_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6867 | |EntrezGene=6867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11522 | |HGNC=11522 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_ENST00000522474_5end | |||
|cluster_id=chr8:38585926..38585943,+ | |||
|coexpression_cluster_id=C2012 | |||
|description=CAGE_peak_16_at_TACC1_5end | |||
|id=chr8:38585926..38585943,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.32e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.21e-22;13!CL:0002615;1.39e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.91e-19,15;CL:0002615,1.21e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.17e-14;7!UBERON:0006603;8.23e-09;65!UBERON:0007297;5.38e-07;2!UBERON:0006965;7.44e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.31e-60!115;UBERON:0001049!1.43e-21!57;UBERON:0005068!1.43e-21!57;UBERON:0006241!1.43e-21!57;UBERON:0007135!1.43e-21!57;UBERON:0002616!1.76e-20!59;UBERON:0003075!3.07e-20!86;UBERON:0007284!3.07e-20!86;UBERON:0002346!1.43e-19!90;UBERON:0005743!1.39e-17!86;UBERON:0003080!7.31e-17!42;UBERON:0001017!8.53e-17!82;UBERON:0000955!1.73e-16!69;UBERON:0006238!1.73e-16!69;UBERON:0002780!7.59e-16!41;UBERON:0001890!7.59e-16!41;UBERON:0006240!7.59e-16!41;UBERON:0000073!1.20e-14!94;UBERON:0001016!1.20e-14!94;UBERON:0003056!1.28e-12!61;UBERON:0000153!3.06e-12!129;UBERON:0007811!3.06e-12!129;UBERON:0001893!5.97e-12!34;UBERON:0002020!9.11e-12!34;UBERON:0003528!9.11e-12!34;UBERON:0000033!2.81e-11!123;UBERON:0002791!3.70e-11!33;UBERON:0000475!8.37e-11!365;UBERON:0001869!2.13e-10!32;UBERON:0002298!1.89e-09!8;UBERON:0004121!3.83e-09!169;UBERON:0000924!4.87e-09!173;UBERON:0006601!4.87e-09!173;UBERON:0000477!2.43e-08!286;UBERON:0003688!3.63e-08!6;UBERON:0002358!3.63e-08!6;UBERON:0003684!3.63e-08!6;UBERON:0001178!3.63e-08!6;UBERON:0002619!3.65e-08!22;UBERON:0001950!4.85e-08!20;UBERON:0000062!1.14e-07!511;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9;UBERON:0004111!5.86e-07!241;UBERON:0000956!8.71e-07!25;UBERON:0000203!8.71e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;5.25e-12;4!UBERON:0003135;1.04e-11;11!UBERON:0006947;1.13e-09;3!UBERON:0004054;1.13e-09;3!UBERON:0003688;1.40e-08;6!UBERON:0002358;1.40e-08;6!UBERON:0003684;1.40e-08;6!UBERON:0001178;1.40e-08;6!UBERON:0007023;1.36e-07;114!UBERON:0003101;5.38e-07;22!UBERON:0000079;5.38e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.92e-28,114;UBERON:0005904,2.64e-12,4;UBERON:0003135,6.21e-12,11;UBERON:0006947,6.28e-10,3;UBERON:0004054,6.28e-10,3;UBERON:0002323,1.70e-09,46;UBERON:0003886,6.45e-09,54;UBERON:0004457,8.13e-09,12;UBERON:0000042,8.13e-09,12;UBERON:0004458,1.02e-08,49;UBERON:0002553,1.38e-08,61;UBERON:0003688,1.70e-08,6;UBERON:0002358,1.70e-08,6;UBERON:0003684,1.70e-08,6;UBERON:0001178,1.70e-08,6;UBERON:0003101,4.03e-07,22;UBERON:0000079,4.03e-07,22 | |||
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| ||
|short_description=p16@TACC1 | |||
}} | }} |
Latest revision as of 03:54, 18 September 2015
Short description: | p16@TACC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TACC1_5end |
Coexpression cluster: | C2012_mature_lung_adipose_medulla_breast_vagina_penis |
Association with transcript: | 64bp_to_ENST00000522474_5end |
EntrezGene: | TACC1 |
HGNC: | 11522 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.91e-19 | 15 |
adipocyte of omentum tissue | 1.21e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.92e-28 | 114 |
duct of male reproductive system | 2.64e-12 | 4 |
male reproductive organ | 6.21e-12 | 11 |
male genital duct | 6.28e-10 | 3 |
internal male genitalia | 6.28e-10 | 3 |
body cavity | 1.70e-09 | 46 |
body cavity precursor | 6.45e-09 | 54 |
cavity lining | 8.13e-09 | 12 |
serous membrane | 8.13e-09 | 12 |
body cavity or lining | 1.02e-08 | 49 |
anatomical cavity | 1.38e-08 | 61 |
omentum | 1.70e-08 | 6 |
peritoneum | 1.70e-08 | 6 |
abdominal cavity | 1.70e-08 | 6 |
visceral peritoneum | 1.70e-08 | 6 |
male organism | 4.03e-07 | 22 |
male reproductive system | 4.03e-07 | 22 |