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FFCP PHASE1:Hg19::chr17:1013251..1013277,-: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:1013251..1013277,-|id=chr17:1013251..1013277,-|ontology_enrichment_celltype=CL:0000708!8.57e-09!3;CL:0000064!2.41e-08!3;CL:0005012!2.41e-08!3;CL:0000067!2.41e-08!3;CL:0002304!2.41e-08!3|ontology_enrichment_celltype_v019=CL:0000708;6.09e-36;3!CL:0002549;5.35e-24;2!CL:0000342;6.82e-13;1!CL:0002565;6.82e-13;1!CL:0000306;1.10e-12;4!CL:0002222;1.10e-12;4!CL:0002224;1.10e-12;4!CL:0000327;1.14e-07;15!CL:0002575;2.28e-07;2!CL:0000499;5.35e-07;28|ontology_enrichment_celltype_v019_2=CL:0000708,7.74e-36,3;CL:0002549,5.35e-24,2;CL:0000306,8.17e-13,4;CL:0002222,8.17e-13,4;CL:0002224,8.17e-13,4;CL:0000342,9.73e-13,1;CL:0002565,9.73e-13,1;CL:0000327,1.19e-07,15;CL:0002575,2.28e-07,2;CL:0000499,5.43e-07,28|ontology_enrichment_development_v019=UBERON:0000358;2.95e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:6193;6.82e-13;1!DOID:3347;6.82e-13;1!DOID:3350;4.42e-07;2|ontology_enrichment_disease_v019_2=DOID:6193,4.23e-13,1;DOID:3347,5.38e-13,1;DOID:3350,3.48e-07,2|ontology_enrichment_uberon=UBERON:0002200!9.81e-11!11;UBERON:0006876!9.81e-11!11;UBERON:0000488!1.23e-10!4;UBERON:0007625!1.46e-10!11;UBERON:0003210!8.57e-09!3;UBERON:0000019!9.15e-09!19;UBERON:0000047!9.15e-09!19;UBERON:0004088!9.15e-09!19;UBERON:0003072!9.15e-09!19;UBERON:0003071!9.15e-09!19;UBERON:0004128!9.15e-09!19;UBERON:0001778!2.41e-08!3;UBERON:0001775!2.41e-08!3;UBERON:0000970!3.11e-08!20;UBERON:0002104!9.40e-08!21;UBERON:0001456!9.40e-08!21;UBERON:0002203!4.81e-07!6;UBERON:0001768!4.81e-07!6;UBERON:0000073!5.41e-07!94;UBERON:0001016!5.41e-07!94;UBERON:0000020!6.38e-07!23|ontology_enrichment_uberon_v019=UBERON:0003210;6.09e-36;3!UBERON:0006876;2.93e-26;11!UBERON:0005629;5.35e-24;2!UBERON:0005358;5.35e-24;2!UBERON:0001886;5.35e-24;2!UBERON:0004086;5.35e-24;2!UBERON:0005282;5.35e-24;2!UBERON:0005281;5.35e-24;2!UBERON:0005284;1.48e-21;5!UBERON:0007625;3.63e-17;11!UBERON:0001801;1.50e-13;14!UBERON:0002506;6.82e-13;1!UBERON:0001769;6.82e-13;1!UBERON:0010077;1.10e-12;4!UBERON:0005389;1.10e-12;4!UBERON:0000484;1.10e-12;4!UBERON:0000965;1.10e-12;4!UBERON:0001803;1.10e-12;4!UBERON:0000488;1.65e-12;4!UBERON:0000019;4.74e-10;19!UBERON:0000047;4.74e-10;19!UBERON:0004088;4.74e-10;19!UBERON:0010230;4.74e-10;19!UBERON:0000970;1.47e-09;20!UBERON:0002104;4.10e-09;21!UBERON:0001456;4.10e-09;21!UBERON:0002203;1.22e-08;6!UBERON:0001768;1.22e-08;6!UBERON:0002200;1.22e-08;6!UBERON:0000020;2.44e-08;23!UBERON:0001032;5.34e-08;24!UBERON:0004456;5.34e-08;24|ontology_enrichment_uberon_v019_2=UBERON:0003210,7.74e-36,3;UBERON:0006876,4.03e-26,11;UBERON:0005629,5.35e-24,2;UBERON:0005358,5.35e-24,2;UBERON:0001886,5.35e-24,2;UBERON:0004086,5.35e-24,2;UBERON:0005282,5.35e-24,2;UBERON:0005281,5.35e-24,2;UBERON:0005284,1.59e-21,5;UBERON:0007625,3.64e-17,11;UBERON:0001801,1.50e-13,14;UBERON:0010077,8.17e-13,4;UBERON:0005389,8.17e-13,4;UBERON:0000484,8.17e-13,4;UBERON:0002546,8.17e-13,4;UBERON:0000965,8.17e-13,4;UBERON:0001803,8.17e-13,4;UBERON:0003073,8.17e-13,4;UBERON:0005426,8.17e-13,4;UBERON:0002506,9.73e-13,1;UBERON:0001769,9.73e-13,1;UBERON:0000488,2.21e-12,4;UBERON:0000019,1.47e-09,20;UBERON:0000047,1.47e-09,20;UBERON:0010312,1.47e-09,20;UBERON:0004088,1.47e-09,20;UBERON:0010230,1.47e-09,20;UBERON:0003072,1.47e-09,20;UBERON:0004128,1.47e-09,20;UBERON:0003071,1.47e-09,20;UBERON:0000970,4.10e-09,21;UBERON:0002104,4.10e-09,21;UBERON:0001456,1.04e-08,22;UBERON:0002203,1.47e-08,6;UBERON:0001768,1.47e-08,6;UBERON:0002200,1.47e-08,6;UBERON:0000020,5.34e-08,24;UBERON:0001032,5.34e-08,24;UBERON:0004456,5.34e-08,24;UBERON:0000076,7.66e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,0.443458794925128,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36221684880438,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,1.44331342025273,2.66639931442677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04589879554123,1.30788020649984,2.0534720029866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02784745597236,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0.2564501251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{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr17:1013251..1013277,-
|description=CAGE_peak_at_chr17:1013251..1013277,-
|id=chr17:1013251..1013277,-
|ontology_enrichment_celltype=CL:0000708!8.57e-09!3;CL:0000064!2.41e-08!3;CL:0005012!2.41e-08!3;CL:0000067!2.41e-08!3;CL:0002304!2.41e-08!3
|ontology_enrichment_celltype_v019=CL:0000708;6.09e-36;3!CL:0002549;5.35e-24;2!CL:0000342;6.82e-13;1!CL:0002565;6.82e-13;1!CL:0000306;1.10e-12;4!CL:0002222;1.10e-12;4!CL:0002224;1.10e-12;4!CL:0000327;1.14e-07;15!CL:0002575;2.28e-07;2!CL:0000499;5.35e-07;28
|ontology_enrichment_celltype_v019_2=CL:0000708,7.74e-36,3;CL:0002549,5.35e-24,2;CL:0000306,8.17e-13,4;CL:0002222,8.17e-13,4;CL:0002224,8.17e-13,4;CL:0000342,9.73e-13,1;CL:0002565,9.73e-13,1;CL:0000327,1.19e-07,15;CL:0002575,2.28e-07,2;CL:0000499,5.43e-07,28
|ontology_enrichment_development_v019=UBERON:0000358;2.95e-13;1
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:6193;6.82e-13;1!DOID:3347;6.82e-13;1!DOID:3350;4.42e-07;2
|ontology_enrichment_disease_v019_2=DOID:6193,4.23e-13,1;DOID:3347,5.38e-13,1;DOID:3350,3.48e-07,2
|ontology_enrichment_uberon=UBERON:0002200!9.81e-11!11;UBERON:0006876!9.81e-11!11;UBERON:0000488!1.23e-10!4;UBERON:0007625!1.46e-10!11;UBERON:0003210!8.57e-09!3;UBERON:0000019!9.15e-09!19;UBERON:0000047!9.15e-09!19;UBERON:0004088!9.15e-09!19;UBERON:0003072!9.15e-09!19;UBERON:0003071!9.15e-09!19;UBERON:0004128!9.15e-09!19;UBERON:0001778!2.41e-08!3;UBERON:0001775!2.41e-08!3;UBERON:0000970!3.11e-08!20;UBERON:0002104!9.40e-08!21;UBERON:0001456!9.40e-08!21;UBERON:0002203!4.81e-07!6;UBERON:0001768!4.81e-07!6;UBERON:0000073!5.41e-07!94;UBERON:0001016!5.41e-07!94;UBERON:0000020!6.38e-07!23
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|short_description=p@chr17:1013251..1013277,-
}}

Latest revision as of 13:39, 25 July 2015

Short description:p@chr17:1013251..1013277, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr17:1013251..1013277, -
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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