FFCP PHASE1:Hg19::chr16:86717037..86717049,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:86717037..86717049,+ | |||
|description=CAGE_peak_at_chr16:86717037..86717049,+ | |||
|id=chr16:86717037..86717049,+ | |||
|ontology_enrichment_celltype=CL:0000192!2.86e-16!42;CL:0000514!2.86e-16!42;CL:0000055!7.91e-16!180;CL:0000680!1.04e-15!57;CL:0000056!1.04e-15!57;CL:0000355!1.04e-15!57;CL:0000359!2.19e-15!32;CL:0000393!1.15e-12!60;CL:0000211!1.15e-12!60;CL:0000187!4.11e-12!54;CL:1000487!2.01e-11!2;CL:0000183!6.99e-11!59;CL:0002595!1.30e-10!5;CL:0002556!2.15e-08!6;CL:0002582!3.55e-08!3;CL:0000048!1.03e-07!430;CL:0000723!1.64e-07!436;CL:0000034!2.97e-07!444;CL:0000222!4.22e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002592;1.12e-17;3!CL:0000359;3.99e-14;32!CL:0000192;1.04e-11;43!CL:0002595;2.66e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.12e-17,3;CL:0000359,8.02e-15,32;CL:0002595,2.66e-11,5;CL:0000192,2.84e-11,43;CL:0000514,2.84e-11,43;CL:0000187,5.25e-09,55;CL:0000680,1.39e-08,58;CL:0000056,1.39e-08,58;CL:0000355,1.39e-08,58;CL:0000393,3.34e-08,61;CL:0000211,3.34e-08,61;CL:0000222,2.26e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.04e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.06e-15!83;UBERON:0002329!5.06e-15!83;UBERON:0003077!5.06e-15!83;UBERON:0003059!5.06e-15!83;UBERON:0007282!5.06e-15!83;UBERON:0009618!5.06e-15!83;UBERON:0007285!5.06e-15!83;UBERON:0001134!1.75e-14!61;UBERON:0002036!1.75e-14!61;UBERON:0003082!1.75e-14!61;UBERON:0002385!6.28e-14!63;UBERON:0001015!6.28e-14!63;UBERON:0000383!6.28e-14!63;UBERON:0004290!3.07e-12!70;UBERON:0001637!2.95e-11!42;UBERON:0003509!2.95e-11!42;UBERON:0004572!2.95e-11!42;UBERON:0003834!1.30e-10!5;UBERON:0001533!1.30e-10!5;UBERON:0000486!5.08e-10!82;UBERON:0004573!1.78e-09!33;UBERON:0004571!1.78e-09!33;UBERON:0001758!2.15e-08!6;UBERON:0003672!2.15e-08!6;UBERON:0004872!3.10e-08!84;UBERON:0001981!2.48e-07!60;UBERON:0007500!2.48e-07!60;UBERON:0004537!2.48e-07!60;UBERON:0006965!2.48e-07!60;UBERON:0005256!3.33e-07!143;UBERON:0003513!8.71e-07!8;UBERON:0004535!9.80e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;1.12e-17;3!UBERON:0005985;1.12e-17;3!UBERON:0001621;1.12e-17;3!UBERON:0003834;2.66e-11;5!UBERON:0001533;2.66e-11;5!UBERON:0001637;3.20e-11;42!UBERON:0003509;3.20e-11;42!UBERON:0004572;3.20e-11;42!UBERON:0004573;3.21e-10;33!UBERON:0004571;3.21e-10;33!UBERON:0003513;1.89e-08;7!UBERON:0007500;7.93e-07;56!UBERON:0001981;7.93e-07;56!UBERON:0004537;7.93e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,1.12e-17,3;UBERON:0004573,2.11e-14,33;UBERON:0004571,2.11e-14,33;UBERON:0001637,1.61e-11,42;UBERON:0003509,1.61e-11,42;UBERON:0004572,1.61e-11,42;UBERON:0003834,2.66e-11,5;UBERON:0001533,2.66e-11,5;UBERON:0003498,3.60e-11,5;UBERON:0005985,3.60e-11,5;UBERON:0007500,1.88e-08,59;UBERON:0001981,1.88e-08,59;UBERON:0004537,1.88e-08,59;UBERON:0006965,1.88e-08,59;UBERON:0003513,1.89e-08,7;UBERON:0001134,4.39e-08,62;UBERON:0002036,4.39e-08,62;UBERON:0003082,4.39e-08,62;UBERON:0002385,7.40e-08,64;UBERON:0001015,7.40e-08,64;UBERON:0000383,7.40e-08,64;UBERON:0000055,1.92e-07,68;UBERON:0002329,3.66e-07,71;UBERON:0003059,3.66e-07,71;UBERON:0007282,3.66e-07,71;UBERON:0004290,3.66e-07,71;UBERON:0009618,3.66e-07,71;UBERON:0003077,4.49e-07,72;UBERON:0007285,4.49e-07,72;UBERON:0007524,5.48e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19383618190213,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0,1.41527737101321,0,0,0,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0,0.66343897524122,7.0152141640602,0,0,0.608731130888112,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47364804324233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:86717037..86717049,+ | |||
}} |
Latest revision as of 13:08, 25 July 2015
Short description: | p@chr16:86717037..86717049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86717037..86717049, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.12e-17 | 3 |
vascular associated smooth muscle cell | 8.02e-15 | 32 |
smooth muscle cell of the subclavian artery | 2.66e-11 | 5 |
smooth muscle cell | 2.84e-11 | 43 |
smooth muscle myoblast | 2.84e-11 | 43 |
muscle cell | 5.25e-09 | 55 |
muscle precursor cell | 1.39e-08 | 58 |
myoblast | 1.39e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.39e-08 | 58 |
electrically responsive cell | 3.34e-08 | 61 |
electrically active cell | 3.34e-08 | 61 |
mesodermal cell | 2.26e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 1.12e-17 | 3 |
systemic artery | 2.11e-14 | 33 |
systemic arterial system | 2.11e-14 | 33 |
artery | 1.61e-11 | 42 |
arterial blood vessel | 1.61e-11 | 42 |
arterial system | 1.61e-11 | 42 |
thoracic segment blood vessel | 2.66e-11 | 5 |
subclavian artery | 2.66e-11 | 5 |
heart blood vessel | 3.60e-11 | 5 |
coronary vessel | 3.60e-11 | 5 |
epithelial tube open at both ends | 1.88e-08 | 59 |
blood vessel | 1.88e-08 | 59 |
blood vasculature | 1.88e-08 | 59 |
vascular cord | 1.88e-08 | 59 |
trunk blood vessel | 1.89e-08 | 7 |
skeletal muscle tissue | 4.39e-08 | 62 |
striated muscle tissue | 4.39e-08 | 62 |
myotome | 4.39e-08 | 62 |
muscle tissue | 7.40e-08 | 64 |
musculature | 7.40e-08 | 64 |
musculature of body | 7.40e-08 | 64 |
vessel | 1.92e-07 | 68 |
somite | 3.66e-07 | 71 |
presomitic mesoderm | 3.66e-07 | 71 |
presumptive segmental plate | 3.66e-07 | 71 |
dermomyotome | 3.66e-07 | 71 |
trunk paraxial mesoderm | 3.66e-07 | 71 |
paraxial mesoderm | 4.49e-07 | 72 |
presumptive paraxial mesoderm | 4.49e-07 | 72 |
dense mesenchyme tissue | 5.48e-07 | 73 |