FFCP PHASE1:Hg19::chr16:86600870..86600921,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2303 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3801 | |||
|TSSclassifier=strong | |||
|UniProt=Q99958 | |||
|association_with_transcript=13bp_to_ENST00000320354,NM_005251,uc002fjq.2_5end | |||
|cluster_id=chr16:86600870..86600921,+ | |||
|description=CAGE_peak_2_at_FOXC2_5end | |||
|id=chr16:86600870..86600921,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.88e-35!180;CL:0000183!1.71e-21!59;CL:0000222!1.02e-20!119;CL:0000680!8.78e-20!57;CL:0000056!8.78e-20!57;CL:0000355!8.78e-20!57;CL:0000187!1.19e-18!54;CL:0000057!3.65e-17!75;CL:0000192!1.76e-15!42;CL:0000514!1.76e-15!42;CL:0000393!3.10e-15!60;CL:0000211!3.10e-15!60;CL:0000359!3.60e-14!32;CL:0002371!1.45e-08!591;CL:0002139!5.04e-08!24;CL:0000220!6.10e-08!246;CL:0002321!8.93e-08!248;CL:0000115!1.25e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.93e-15;32!CL:0000192;4.16e-11;43!CL:0000187;1.54e-09;55!CL:0000393;3.86e-07;61!CL:0000211;3.86e-07;61!CL:1000449;4.71e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.85e-17,58;CL:0000056,2.85e-17,58;CL:0000355,2.85e-17,58;CL:0000222,8.21e-17,121;CL:0000187,1.40e-16,55;CL:0000359,6.10e-16,32;CL:0000192,7.44e-15,43;CL:0000514,7.44e-15,43;CL:0000393,1.19e-13,61;CL:0000211,1.19e-13,61;CL:0000057,8.81e-13,76;CL:1000449,5.87e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.16e-11;43!CL:0000355;2.88e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.24e-28!79;UBERON:0007798!2.24e-28!79;UBERON:0004872!1.38e-25!84;UBERON:0001009!2.21e-23!113;UBERON:0004535!5.46e-23!110;UBERON:0000914!6.24e-23!83;UBERON:0002329!6.24e-23!83;UBERON:0003077!6.24e-23!83;UBERON:0003059!6.24e-23!83;UBERON:0007282!6.24e-23!83;UBERON:0009618!6.24e-23!83;UBERON:0007285!6.24e-23!83;UBERON:0000055!1.51e-22!69;UBERON:0001981!1.53e-22!60;UBERON:0007500!1.53e-22!60;UBERON:0004537!1.53e-22!60;UBERON:0006965!1.53e-22!60;UBERON:0003914!1.05e-20!118;UBERON:0004290!4.24e-19!70;UBERON:0001134!2.01e-18!61;UBERON:0002036!2.01e-18!61;UBERON:0003082!2.01e-18!61;UBERON:0002385!4.18e-18!63;UBERON:0001015!4.18e-18!63;UBERON:0000383!4.18e-18!63;UBERON:0001637!6.77e-18!42;UBERON:0003509!6.77e-18!42;UBERON:0004572!6.77e-18!42;UBERON:0005256!1.71e-17!143;UBERON:0000486!3.04e-17!82;UBERON:0000119!3.56e-14!312;UBERON:0000483!1.61e-13!309;UBERON:0004573!3.48e-13!33;UBERON:0004571!3.48e-13!33;UBERON:0000477!5.15e-13!286;UBERON:0002100!1.03e-12!216;UBERON:0000475!4.26e-12!365;UBERON:0000481!6.92e-12!347;UBERON:0003103!2.24e-11!69;UBERON:0000468!3.30e-11!659;UBERON:0000490!3.82e-11!138;UBERON:0003104!4.97e-10!238;UBERON:0009142!4.97e-10!238;UBERON:0004111!7.88e-10!241;UBERON:0000467!9.11e-10!625;UBERON:0000480!1.32e-09!626;UBERON:0007100!1.55e-09!27;UBERON:0000948!2.36e-09!24;UBERON:0005498!2.36e-09!24;UBERON:0004140!2.36e-09!24;UBERON:0009881!2.36e-09!24;UBERON:0004141!2.36e-09!24;UBERON:0003084!2.36e-09!24;UBERON:0007005!2.36e-09!24;UBERON:0004139!2.36e-09!24;UBERON:0004291!2.36e-09!24;UBERON:0000926!1.75e-08!448;UBERON:0004120!1.75e-08!448;UBERON:0006603!1.75e-08!448;UBERON:0000025!3.21e-08!194;UBERON:0004876!3.16e-07!20;UBERON:0000923!3.30e-07!604;UBERON:0005291!3.30e-07!604;UBERON:0006598!3.30e-07!604;UBERON:0002532!3.30e-07!604;UBERON:0000947!3.72e-07!21;UBERON:0010191!3.72e-07!21;UBERON:0002050!4.50e-07!605;UBERON:0005423!4.50e-07!605;UBERON:0000922!4.59e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.28e-14;42!UBERON:0003509;5.28e-14;42!UBERON:0004572;5.28e-14;42!UBERON:0004573;2.56e-11;33!UBERON:0004571;2.56e-11;33!UBERON:0002049;3.64e-11;75!UBERON:0007798;3.64e-11;75!UBERON:0007500;4.22e-11;56!UBERON:0001981;4.22e-11;56!UBERON:0004537;4.22e-11;56!UBERON:0003914;1.12e-09;74!UBERON:0000055;2.82e-09;65!UBERON:0006876;3.57e-08;11!UBERON:0006555;4.71e-07;15!UBERON:0004819;4.71e-07;15!UBERON:0001285;4.71e-07;15!UBERON:0007684;4.71e-07;15!UBERON:0004535;4.74e-07;109!UBERON:0000075;6.21e-07;16!UBERON:0000948;7.57e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.22e-27,78;UBERON:0007798,1.22e-27,78;UBERON:0004535,5.43e-22,109;UBERON:0004872,9.08e-22,83;UBERON:0007500,2.20e-21,59;UBERON:0001981,2.20e-21,59;UBERON:0004537,2.20e-21,59;UBERON:0006965,2.20e-21,59;UBERON:0001009,8.62e-21,112;UBERON:0000055,1.72e-20,68;UBERON:0007503,2.38e-20,78;UBERON:0001637,2.04e-19,42;UBERON:0003509,2.04e-19,42;UBERON:0004572,2.04e-19,42;UBERON:0007524,2.78e-18,73;UBERON:0002329,5.38e-18,71;UBERON:0003059,5.38e-18,71;UBERON:0007282,5.38e-18,71;UBERON:0004290,5.38e-18,71;UBERON:0009618,5.38e-18,71;UBERON:0003914,5.49e-18,117;UBERON:0003077,1.61e-17,72;UBERON:0007285,1.61e-17,72;UBERON:0001134,4.96e-16,62;UBERON:0002036,4.96e-16,62;UBERON:0003082,4.96e-16,62;UBERON:0000486,1.69e-15,83;UBERON:0002385,4.33e-15,64;UBERON:0001015,4.33e-15,64;UBERON:0000383,4.33e-15,64;UBERON:0003104,6.99e-15,160;UBERON:0009142,6.99e-15,160;UBERON:0004573,4.22e-13,33;UBERON:0004571,4.22e-13,33;UBERON:0000490,3.88e-10,148;UBERON:0000119,4.92e-10,309;UBERON:0000483,2.24e-09,306;UBERON:0005256,2.54e-09,122;UBERON:0001444,1.49e-08,49;UBERON:0006876,3.13e-08,11;UBERON:0000926,8.05e-08,315;UBERON:0004120,8.05e-08,315;UBERON:0006603,8.05e-08,315;UBERON:0000033,8.47e-08,56;UBERON:0000948,1.05e-07,24;UBERON:0005498,1.05e-07,24;UBERON:0004140,1.05e-07,24;UBERON:0009881,1.05e-07,24;UBERON:0004141,1.05e-07,24;UBERON:0003084,1.05e-07,24;UBERON:0007005,1.05e-07,24;UBERON:0004139,1.05e-07,24;UBERON:0004291,1.05e-07,24;UBERON:0000153,3.42e-07,62;UBERON:0007811,3.42e-07,62;UBERON:0003103,4.15e-07,68;UBERON:0000075,5.72e-07,16;UBERON:0004211,5.87e-07,15;UBERON:0009773,5.87e-07,15;UBERON:0001231,5.87e-07,15;UBERON:0001285,5.87e-07,15;UBERON:0007684,5.87e-07,15;UBERON:0004208,5.87e-07,15;UBERON:0002100,8.86e-07,199 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.563817616383885,1.0007329835313,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0,0.655324116390517,2.11013582582763,4.20805600064159,5.30235801164665,0.672325146451775,0.602694528023977,0.730310090387373,0,0.738726348460727,3.67201244239655,2.5076377718247,0,0.410623275218653,1.38096903554283,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.40648818027883,2.1686349143074,7.01873074890245,2.31754430337318,2.3858578411533,4.37971383272372,1.41802225746102,5.5432349365641,4.74307842742881,0.458426764241994,0,0,0,0,0,0,0,0,1.98762407366705,0.860234595106124,1.38856200643038,1.69592382577203,3.77549492588915,3.57653454522088,1.8809546988313,0.516833518338658,0.35576626268671,1.33888245105868,0.805658634218294,1.52054421143703,0.976248230192678,1.47065232138347,5.67099363517232,0.625098097988558,0.44905874525234,1.23872628531654,4.5994991239765,2.84779697870439,0.916008719652036,0,0,0,1.49091585508596,3.79891534993739,0.529636723252875,1.43418310374407,3.19201543978521,1.68203280042692,3.20246987189115,6.90669135568048,0.933633106199299,1.21239604862719,0.817309515567294,1.51357427644931,2.30470369792,4.21778577300834,3.1216007683032,3.4228309292667,5.23070381931304,1.64408298101271,3.23745888736263,2.10676210053373,5.71631679513701,4.29920110591188,10.7458812422796,1.18800285728205,1.7308685049499,0,0.718618141816238,2.69337782326506,5.12985931475053,4.98715407871529,1.31693286264251,3.37136575378922,1.95309476578576,1.13432183160021,0.89694817844431,0.213557388818567,0.423863802319124,1.20036438433761,0.309157587715317,0.515281080091258,0.558350568994769,0.843881661206331,0.68205903612839,0.252433774244115,0.276149695926898,1.93975268182574,2.84007674013291,0.705264687593482,1.3564847384839,0,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0.928735856063958,2.16563844500876,0,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,2.80483547606892,0.8231480226628,0,0,0,0,0,0,1.71567810298526,0,0,0,0,11.077482380551,4.15973914111831,1.44331342025273,1.39116485970092,4.57893907519705,2.45422961193825,2.31492756288305,2.85381228351897,0,0,0,0,0,0,0.503946384596579,0.283550194484773,2.95543124919399,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79409734952577,1.30788020649984,1.1734125731352,1.68053230485111,0,0,0.26593811658487,0,3.34369586540785,2.83698264046557,4.79559922228979,0.142977993658148,2.17048642156577,0.823240336780769,0.65147236858747,0,0,0.301439377059586,2.61460037580088,0.499864955910285,0,0,0,5.27174682081482,4.59447743336456,7.13184525203592,1.88215698667853,5.34238438630997,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,4.78496817704646,3.00102312635806,5.69656549769445,5.8231841228626,7.85087550707512,2.68094105557689,3.74852527976682,6.92176029373754,6.82222512167955,10.3473071292505,3.98535359121262,7.37476674166813,0.60818530127658,16.2514960694075,13.0394501048125,0,0,0,0.303127571446259,3.32870879020994,1.81434175997808,0.992431231275107,0.306923946576125,0.280660094433074,0.768834895534206,1.02341449813341,2.0911009748669,1.48418066444991,0.154209693802656,4.26148140751505,1.72467027628999,3.63478100428535,1.85936605535935,0,0.40101294060657,0.0920809889358963,0.34444334449382,0.910455840033585,0.655622074797121,6.31679458070376,4.62092022626489,8.62784746094541,4.38417673959782,5.80533958910816,1.13733384070897,0.680374821106063,3.45465465763423,13.880452742126,6.50271450105247,6.52196706011309,0,0.831076008928724,2.46262230194396,0,0,0.256450125116389,2.29610251989794,0.976135183992909,0.309123034943167,0,0.165018999841176,0.574265537996172,0.650060246036521,1.6068392984416,2.90012154876366,1.84858340537573,1.5350367472613,1.7918754422989,0.214840489736547,1.30515024522806,0.681813019328807,0.979352392114111,0.495854746082934,0.384380134730212,0,0.10115778085555,2.32422774648643,1.5740617341532,1.3940745403212,2.46426864140871,12.7753447276085,2.60979897622522,2.59453906745488,3.43499728180779,2.97726695487734,2.53103539774981,2.09693213316207,5.62975140884935,1.71175595213568,5.72765846266686,5.49464048139461,0.539617372749944,0,0.706874414074119,6.87420437349274,3.17020642346017,2.52755073743389,0.975267478179181,0.974853958525138,2.11300293513511,0.818999468447914,0.424216295861138,5.65040583101214,6.61638412255349,9.28814565337708,4.38450885253763,4.05142873986681,2.62357900818653,6.08731130888112,5.26699946769575,5.07052084558035,1.14729081763241,1.76848273823618,4.63672366925625,1.77380532035299,0.422215270595328,0.658589785919804,4.17420491142287,3.49934720244983,0,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,1.7737206141467,2.29723400206959,0,0,0,0,0,0,0,0,1.1750647824022,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0,0,0,0,0,11.556383318562,0,0,0,0,3.73247505194169,0,0,0,0.789147245095469,0,10.0023291130173,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0.438770794307945,0,0.41827123283581,1.00035336054936,0.797594390929008,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,5.05492637027904,0,0,7.97584647248622,3.97190347050599,6.90652420495896,3.58417289318877,0,1.66409607615766,0,0,0.0870592065804026,0.698906672968121,3.26773461696071,0.580537987734511,0.219267951258557,0.739039113478883,0.484945082442097,0.0882561266915003,1.35588444468319,6.02984468445704,0.993573058514948,0.0633107959558787,0.195551382734803,0,0.426905989478705,0,0.432271251462318,0,0,0,0.248505071130865,0.235694034616795,0.543616824294456,0.627617077873999,0.203996435272644,0,0,0,0,0,0,2.79282401272254,4.58320848023367,4.30723814746088,0.798716001995964,0.429226048136571,0.89268582976749,1.07493555978762,5.40449825313605,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,2.09818352539992,0,0,0,1.42939065274673,1.32418394073086,0,2.17199840701485,0,1.63293680054705,0,0,2.89659637035217,0.226624183040251,0,0,0,0.13223260174269,0.171086837884329,0,0.533937062838473,0.78602152549833,1.24271716604159,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.496771223531068,0,1.49976489554528,0,0,3.52898729547258,0,0,0.447764408660622,0.233713309847224,0,3.21985108967651,0.251567901752575,1.77962244319307,0.686520205190771,0.604923695052956,4.97399041864897,0.887130899937803,0.796483835818512,0,0.310525913752519,3.7323558705677,1.59505028734797,0.521745061811734,0.150257608997218,0.380805212168795,0,0.181848659202559,0.859284456339908,0.464033759878494,0.398095888698616,2.40016658797892,1.71697852591396,1.34699795506368,0,0,0,0,0,1.389134845943,0.489473409012935,1.61179956973339,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,1.96565909307848,0,0,0,0,0,3.40509572140102,4.78675470654786,0,0,0,0,0,0,0,1.06287460050841,0,0,4.77006525980128,0,0,6.34816698643231,1.2249819094128,0.128458450192919,0,0,0.41023272848151,0.252071696221718,0.207471757392654,0.484426936895553,0,0.196295437002051,0.353909170043221,0,0,4.57658514560601,3.4517996303005,2.98374333174412,0.676892955143315,1.0085253435176,0,0,6.71464861791397,0,0.270150338473579,0,0,0.19024743058172,0,0,1.48863353516788,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.197318320688547,0,0,0.313972371402056,0,0,0.913158720509496,0,0,1.35805433935647,0,0,0,0.801711364730253,4.97318793991288,8.1944869005096,6.22133695632683,0,0.118332000730565,0.170426809518315,0.846774100381858,0.4582137370881,0,0,0,0,0,0,0.307988420568741,1.1598144313382,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0.8453114551668,2.54890672031725,0,0,0,0,0,0,0,0,0.143339583151451,2.0510303085114,0.135982980381829,0.436350690340377,0,1.11598505450025,2.77305377178851,0.432626562123789,0,0,0,0,0.26721740526556,0,0,1.36401656792831,1.60778478093707,0,0,1.0661699095049,1.1903221573187,0,0,0,0.25458863311266,0.404234377916439,0.217716747896961,1.36893320434112,0,0.573777643141411,2.66128285236811,0,0,0,0,0,0.488965776731466,0,0,1.61019034872821,0 | |||
|short_description=p2@FOXC2 | |||
}} |
Latest revision as of 06:51, 18 September 2015
Short description: | p2@FOXC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000320354, NM_005251, uc002fjq.2_5end |
EntrezGene: | FOXC2 |
HGNC: | 3801 |
UniProt: | Q99958 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.85e-17 | 58 |
myoblast | 2.85e-17 | 58 |
multi-potent skeletal muscle stem cell | 2.85e-17 | 58 |
mesodermal cell | 8.21e-17 | 121 |
muscle cell | 1.40e-16 | 55 |
vascular associated smooth muscle cell | 6.10e-16 | 32 |
smooth muscle cell | 7.44e-15 | 43 |
smooth muscle myoblast | 7.44e-15 | 43 |
electrically responsive cell | 1.19e-13 | 61 |
electrically active cell | 1.19e-13 | 61 |
fibroblast | 8.81e-13 | 76 |
epithelial cell of nephron | 5.87e-07 | 15 |