FFCP PHASE1:Hg19::chr16:85942631..85942635,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3394 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5358 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=35bp_to_uc010chp.2_5end | |||
|cluster_id=chr16:85942631..85942635,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_5_at_IRF8_5end | |||
|id=chr16:85942631..85942635,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.58e-67!119;CL:0000738!3.45e-64!140;CL:0002031!7.83e-62!124;CL:0002009!6.81e-61!65;CL:0002057!8.55e-59!42;CL:0000037!2.54e-58!172;CL:0000566!2.54e-58!172;CL:0002194!1.72e-57!63;CL:0000576!1.72e-57!63;CL:0000040!1.72e-57!63;CL:0000559!1.72e-57!63;CL:0000557!1.81e-54!71;CL:0000860!5.12e-54!45;CL:0000988!7.50e-54!182;CL:0002032!1.79e-52!165;CL:0000837!1.79e-52!165;CL:0000839!2.75e-50!70;CL:0000766!2.32e-47!76;CL:0000763!2.11e-38!112;CL:0000049!2.11e-38!112;CL:0000945!8.05e-24!24;CL:0000826!8.05e-24!24;CL:0000134!3.02e-19!358;CL:0002320!1.94e-18!365;CL:0000219!1.32e-15!390;CL:0000048!7.97e-13!430;CL:0000236!1.31e-12!14;CL:0000723!2.42e-12!436;CL:0000034!2.45e-12!444;CL:0000542!3.44e-12!53;CL:0000051!3.44e-12!53;CL:0000838!2.79e-11!52;CL:0002393!4.68e-09!9;CL:0002397!4.68e-09!9;CL:0000451!3.84e-08!10;CL:0000840!4.38e-08!5;CL:0001029!4.38e-08!5;CL:0000784!2.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.09e-54;33!CL:0002057;1.09e-54;33!CL:0000473;7.57e-44;39!CL:0000234;7.57e-44;39!CL:0000576;3.31e-25;48!CL:0000784;1.69e-22;3!CL:0000236;2.19e-13;13!CL:0000766;8.86e-11;69!CL:0000763;1.72e-09;100!CL:0002087;5.54e-09;104!CL:0000738;9.76e-09;136!CL:0000785;2.55e-08;1!CL:0000819;2.55e-08;1!CL:0000945;3.63e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.25e-46,42;CL:0002057,3.25e-46,42;CL:0000473,3.65e-45,48;CL:0000234,3.65e-45,48;CL:0002194,8.97e-40,59;CL:0000576,8.97e-40,59;CL:0000040,8.97e-40,59;CL:0000559,8.97e-40,59;CL:0002009,2.24e-38,61;CL:0000839,3.01e-35,66;CL:0000557,1.12e-34,67;CL:0000766,4.66e-32,72;CL:0002087,1.90e-31,115;CL:0000738,3.92e-31,136;CL:0002031,5.62e-30,120;CL:0000037,1.42e-26,168;CL:0000988,5.23e-25,177;CL:0002032,2.31e-23,161;CL:0000837,2.31e-23,161;CL:0000763,1.25e-22,108;CL:0000049,1.25e-22,108;CL:0000784,1.82e-22,3;CL:0000236,1.82e-12,14;CL:0000134,2.81e-10,354;CL:0002320,5.48e-10,361;CL:0000219,5.74e-09,386;CL:0000819,2.13e-08,1;CL:0000048,1.02e-07,427;CL:0000723,1.53e-07,433;CL:0000034,2.56e-07,441;CL:0000945,3.41e-07,24;CL:0000826,3.41e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;3.40e-35;42!CL:0000049;6.84e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.55e-08;1!DOID:8675;2.55e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.13e-08,1;DOID:8675,2.13e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.87e-49!80;UBERON:0001474!1.84e-44!86;UBERON:0002390!6.83e-42!102;UBERON:0003061!6.83e-42!102;UBERON:0002193!1.34e-41!112;UBERON:0002405!6.67e-37!115;UBERON:0004765!1.44e-35!101;UBERON:0001434!1.44e-35!101;UBERON:0002384!2.44e-17!375;UBERON:0002204!1.12e-15!167;UBERON:0003081!1.19e-13!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.55e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.31e-30,76;UBERON:0001474,9.16e-28,82;UBERON:0002405,6.60e-27,93;UBERON:0004765,5.24e-25,90;UBERON:0002390,1.07e-22,98;UBERON:0003061,1.07e-22,98;UBERON:0002193,1.09e-22,108;UBERON:0001434,3.57e-22,100;UBERON:0002204,7.05e-12,167;UBERON:0002384,1.36e-09,371;UBERON:0003081,3.89e-09,203;UBERON:0000029,1.98e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.787107813136792,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0.880801318004542,0,0.802177789880567,0.868043482863407,0.223915474239924,0,0.257575567634187,0.436194716338694,0,1.21292030593908,1.39457422143411,0.411167888021826,0.619412741790207,5.17846306179871,5.12321413058201,3.78371567821736,0.344745680736619,1.29096936716765,0,0.376484679085209,0.272906150057846,1.12361742222542,0.306083892370903,0.962787081228281,1.27867425159808,3.95821560224059,5.58498241340569,5.96714650745772,0.580418477257168,1.70215567407342,1.86846674698672,3.26623264833766,6.25779502104242,2.82345498116652,1.21079900526674,0.736555271975129,0.632924774881769,0.211255286311942,0.637812899895131,0.419317291016752,0.22465726229299,0.300353785683013,0.48217676009124,0,0.19891667719909,0.182664153764634,0,0.546138611262131,1.77901850772711,0.426730222566507,1.20118796110804,0,1.32208974556972,0,2.84606484554724,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.26591592103773,3.57735936458013,2.85997455390064,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0.605399121573143,0,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,1.45963831372533,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.899895566206002,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,1.48849806543585,0,0.852548188666271,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p5@IRF8 | |||
}} |
Latest revision as of 06:18, 18 September 2015
Short description: | p5@IRF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IRF8_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 35bp_to_uc010chp.2_5end |
EntrezGene: | IRF8 |
HGNC: | 5358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.31e-30 | 76 |
bone element | 9.16e-28 | 82 |
immune system | 6.60e-27 | 93 |
skeletal element | 5.24e-25 | 90 |
hematopoietic system | 1.07e-22 | 98 |
blood island | 1.07e-22 | 98 |
hemolymphoid system | 1.09e-22 | 108 |
skeletal system | 3.57e-22 | 100 |
musculoskeletal system | 7.05e-12 | 167 |
connective tissue | 1.36e-09 | 371 |
lateral plate mesoderm | 3.89e-09 | 203 |
lymph node | 1.98e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.13e-08 | 1 |
lymphosarcoma | 2.13e-08 | 1 |