FFCP PHASE1:Hg19::chr16:81844812..81844828,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:81844812..81844828,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr16:81844812..81844828,+ | |||
|id=chr16:81844812..81844828,+ | |||
|ontology_enrichment_celltype=CL:0000945!7.56e-43!24;CL:0000826!7.56e-43!24;CL:0000838!1.74e-22!52;CL:0000542!5.02e-22!53;CL:0000051!5.02e-22!53;CL:0000785!7.03e-19!2;CL:0000955!7.03e-19!2;CL:0000818!7.03e-19!2;CL:0000954!7.03e-19!2;CL:0000816!7.03e-19!2;CL:0000817!6.58e-13!3;CL:0000946!1.98e-10!1;CL:0000786!1.98e-10!1;CL:0000980!1.98e-10!1;CL:0002087!3.32e-10!119;CL:0000819!3.40e-10!1;CL:0002031!1.04e-09!124;CL:0000738!2.36e-08!140;CL:0002032!5.60e-08!165;CL:0000837!5.60e-08!165;CL:0000037!1.48e-07!172;CL:0000566!1.48e-07!172;CL:0000988!5.18e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.84e-60;24!CL:0000946;1.08e-19;1!CL:0000786;1.08e-19;1!CL:0000785;4.69e-19;1!CL:0000819;4.69e-19;1!CL:0000542;2.95e-15;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.33e-60,24;CL:0000826,7.33e-60,24;CL:0000785,6.83e-37,2;CL:0000955,6.83e-37,2;CL:0000818,6.83e-37,2;CL:0000954,6.83e-37,2;CL:0000816,6.83e-37,2;CL:0000838,1.86e-27,52;CL:0000542,6.23e-27,53;CL:0000051,6.23e-27,53;CL:0000817,5.50e-25,3;CL:0000946,1.30e-19,1;CL:0000786,1.30e-19,1;CL:0000980,1.30e-19,1;CL:0000819,3.91e-19,1;CL:0002087,5.00e-12,115;CL:0002031,1.66e-11,120;CL:0000738,4.34e-10,136;CL:0002032,1.99e-08,161;CL:0000837,1.99e-08,161;CL:0000037,4.74e-08,168;CL:0000988,1.32e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;6.83e-37;2!CL:0000051;2.95e-15;53 | |||
|ontology_enrichment_disease=DOID:0060058!3.16e-31!10;DOID:630!1.80e-10!1;DOID:0050177!1.80e-10!1;DOID:0050427!1.80e-10!1;DOID:0060073!3.40e-10!1;DOID:8675!3.40e-10!1;DOID:2355!4.85e-10!1;DOID:2531!1.11e-07!51;DOID:0060083!1.11e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.08e-29;10!DOID:630;1.08e-19;1!DOID:0050177;1.08e-19;1!DOID:0050427;1.08e-19;1!DOID:0060073;4.69e-19;1!DOID:8675;4.69e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,5.66e-29,10;DOID:630,1.08e-19,1;DOID:0050177,1.08e-19,1;DOID:0050427,1.08e-19,1;DOID:0060073,3.91e-19,1;DOID:8675,3.91e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.19e-12!3;UBERON:0004854!1.19e-12!3;UBERON:0009034!1.19e-12!3;UBERON:0002095!1.19e-12!3;UBERON:0004782!1.19e-12!3;UBERON:0003281!1.19e-12!3;UBERON:0009664!1.19e-12!3;UBERON:0002296!1.19e-12!3;UBERON:0005602!1.19e-12!3;UBERON:0001179!1.19e-12!3;UBERON:0006293!1.19e-12!3;UBERON:0002372!8.24e-10!1;UBERON:0001961!8.24e-10!1;UBERON:0001744!8.24e-10!1;UBERON:0001735!8.24e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.82e-07,3;UBERON:0004854,1.82e-07,3;UBERON:0009034,1.82e-07,3;UBERON:0002095,1.82e-07,3;UBERON:0004782,1.82e-07,3;UBERON:0003281,1.82e-07,3;UBERON:0009664,1.82e-07,3;UBERON:0002296,1.82e-07,3;UBERON:0005602,1.82e-07,3;UBERON:0001179,1.82e-07,3;UBERON:0006293,1.82e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89045796786888,5.7470412614962,4.64393609750708,0,0,0,0,0,0,1.00707360754392,2.55904618477359,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07712013652674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18566979138767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,7.02927324090253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,7.89535131806939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,7.05250683067112 | |||
|short_description=p@chr16:81844812..81844828,+ | |||
}} |
Latest revision as of 12:45, 25 July 2015
Short description: | p@chr16:81844812..81844828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:81844812..81844828, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.33e-60 | 24 |
pro-B cell | 7.33e-60 | 24 |
mature B cell | 6.83e-37 | 2 |
pre-B-II cell | 6.83e-37 | 2 |
transitional stage B cell | 6.83e-37 | 2 |
small pre-B-II cell | 6.83e-37 | 2 |
immature B cell | 6.83e-37 | 2 |
lymphoid lineage restricted progenitor cell | 1.86e-27 | 52 |
lymphocyte | 6.23e-27 | 53 |
common lymphoid progenitor | 6.23e-27 | 53 |
precursor B cell | 5.50e-25 | 3 |
antibody secreting cell | 1.30e-19 | 1 |
plasma cell | 1.30e-19 | 1 |
plasmablast | 1.30e-19 | 1 |
B-1 B cell | 3.91e-19 | 1 |
nongranular leukocyte | 5.00e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.66e-11 | 120 |
leukocyte | 4.34e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.99e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-08 | 161 |
hematopoietic stem cell | 4.74e-08 | 168 |
hematopoietic cell | 1.32e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.82e-07 | 3 |
gastrointestinal system mesentery | 1.82e-07 | 3 |
stomach region | 1.82e-07 | 3 |
mesentery | 1.82e-07 | 3 |
gastrointestinal system serosa | 1.82e-07 | 3 |
mesentery of stomach | 1.82e-07 | 3 |
gut mesentery | 1.82e-07 | 3 |
dorsal mesentery | 1.82e-07 | 3 |
dorsal mesogastrium | 1.82e-07 | 3 |
peritoneal cavity | 1.82e-07 | 3 |
spleen primordium | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 5.66e-29 | 10 |
genetic disease | 1.08e-19 | 1 |
monogenic disease | 1.08e-19 | 1 |
xeroderma pigmentosum | 1.08e-19 | 1 |
lymphatic system cancer | 3.91e-19 | 1 |
lymphosarcoma | 3.91e-19 | 1 |