FFCP PHASE1:Hg19::chr16:81844780..81844795,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:81844780..81844795,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr16:81844780..81844795,+ | |||
|id=chr16:81844780..81844795,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.83e-22!24;CL:0000826!4.83e-22!24;CL:0000838!1.14e-15!52;CL:0000542!2.54e-15!53;CL:0000051!2.54e-15!53;CL:0000785!1.81e-12!2;CL:0000955!1.81e-12!2;CL:0000818!1.81e-12!2;CL:0000954!1.81e-12!2;CL:0000816!1.81e-12!2;CL:0000817!1.36e-08!3;CL:0000946!3.73e-07!1;CL:0000786!3.73e-07!1;CL:0000980!3.73e-07!1;CL:0000819!5.57e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.78e-40;24!CL:0000946;3.82e-21;1!CL:0000786;3.82e-21;1!CL:0000542;3.02e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.56e-40,24;CL:0000826,3.56e-40,24;CL:0000946,3.45e-21,1;CL:0000786,3.45e-21,1;CL:0000980,3.45e-21,1;CL:0000838,1.65e-18,52;CL:0000542,3.71e-18,53;CL:0000051,3.71e-18,53;CL:0000785,2.73e-11,2;CL:0000955,2.73e-11,2;CL:0000818,2.73e-11,2;CL:0000954,2.73e-11,2;CL:0000816,2.73e-11,2;CL:0002087,3.67e-08,115;CL:0000817,5.93e-08,3;CL:0002031,8.25e-08,120;CL:0000738,7.42e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;2.88e-11;2!CL:0000051;3.02e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.41e-20!10;DOID:630!2.95e-07!1;DOID:0050177!2.95e-07!1;DOID:0050427!2.95e-07!1;DOID:0060073!5.57e-07!1;DOID:8675!5.57e-07!1;DOID:2355!7.82e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.53e-21;1!DOID:0050177;1.53e-21;1!DOID:0050427;1.53e-21;1!DOID:0060058;6.53e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.53e-21,1;DOID:0050177,1.53e-21,1;DOID:0050427,1.53e-21,1;DOID:0060058,6.28e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.11e-19!7;UBERON:0002106!4.84e-17!3;UBERON:0004854!4.84e-17!3;UBERON:0009034!4.84e-17!3;UBERON:0002095!4.84e-17!3;UBERON:0004782!4.84e-17!3;UBERON:0003281!4.84e-17!3;UBERON:0009664!4.84e-17!3;UBERON:0002296!4.84e-17!3;UBERON:0005602!4.84e-17!3;UBERON:0001179!4.84e-17!3;UBERON:0006293!4.84e-17!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.84e-08,3;UBERON:0004854,4.84e-08,3;UBERON:0009034,4.84e-08,3;UBERON:0002095,4.84e-08,3;UBERON:0004782,4.84e-08,3;UBERON:0003281,4.84e-08,3;UBERON:0009664,4.84e-08,3;UBERON:0002296,4.84e-08,3;UBERON:0005602,4.84e-08,3;UBERON:0001179,4.84e-08,3;UBERON:0006293,4.84e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9801228241701,2.54511827294832,3.62069594042925,0,0,0.154816123316076,0,0,0,0.619737604642413,1.56386155736164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0.493313713811028,0.552700035571697,0,0,0,0,0.453237370790265,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,2.09244169283818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18566979138767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88084968889448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,4.59729317254673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,5.77023286145819 | |||
|short_description=p@chr16:81844780..81844795,+ | |||
}} |
Latest revision as of 12:45, 25 July 2015
Short description: | p@chr16:81844780..81844795, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:81844780..81844795, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.56e-40 | 24 |
pro-B cell | 3.56e-40 | 24 |
antibody secreting cell | 3.45e-21 | 1 |
plasma cell | 3.45e-21 | 1 |
plasmablast | 3.45e-21 | 1 |
lymphoid lineage restricted progenitor cell | 1.65e-18 | 52 |
lymphocyte | 3.71e-18 | 53 |
common lymphoid progenitor | 3.71e-18 | 53 |
mature B cell | 2.73e-11 | 2 |
pre-B-II cell | 2.73e-11 | 2 |
transitional stage B cell | 2.73e-11 | 2 |
small pre-B-II cell | 2.73e-11 | 2 |
immature B cell | 2.73e-11 | 2 |
nongranular leukocyte | 3.67e-08 | 115 |
precursor B cell | 5.93e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.25e-08 | 120 |
leukocyte | 7.42e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.84e-08 | 3 |
gastrointestinal system mesentery | 4.84e-08 | 3 |
stomach region | 4.84e-08 | 3 |
mesentery | 4.84e-08 | 3 |
gastrointestinal system serosa | 4.84e-08 | 3 |
mesentery of stomach | 4.84e-08 | 3 |
gut mesentery | 4.84e-08 | 3 |
dorsal mesentery | 4.84e-08 | 3 |
dorsal mesogastrium | 4.84e-08 | 3 |
peritoneal cavity | 4.84e-08 | 3 |
spleen primordium | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.53e-21 | 1 |
monogenic disease | 1.53e-21 | 1 |
xeroderma pigmentosum | 1.53e-21 | 1 |
lymphoma | 6.28e-09 | 10 |