FFCP PHASE1:Hg19::chr16:60118628..60118633,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:60118628..60118633,- | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_at_chr16:60118628..60118633,- | |||
|id=chr16:60118628..60118633,- | |||
|ontology_enrichment_celltype=CL:0002322!2.80e-23!5;CL:0000945!1.43e-07!24;CL:0000826!1.43e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.14e-23;7!CL:0000586;1.14e-23;7!CL:0002149;7.01e-08;6!CL:0002255;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.14e-23,7;CL:0000586,1.14e-23,7;CL:0002149,7.25e-08,6;CL:0002255,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.39e-17;10!UBERON:0005564;6.39e-17;10!UBERON:0007123;3.35e-09;5 | |||
|ontology_enrichment_disease=DOID:2355!3.31e-09!1;DOID:3112!7.75e-09!1;DOID:178!1.32e-08!1;DOID:326!1.32e-08!1;DOID:3978!1.32e-08!1;DOID:3394!1.32e-08!1;DOID:5844!1.32e-08!1;DOID:1287!1.72e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:2355;9.91e-41;1!DOID:74;3.81e-21;2!DOID:1287;2.80e-11;4!DOID:3095;2.93e-08;22!DOID:2994;2.93e-08;22!DOID:3001;7.01e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.91e-41,1;DOID:74,3.81e-21,2;DOID:1287,2.80e-11,4;DOID:3095,2.93e-08,22;DOID:2994,2.93e-08,22;DOID:3001,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002046!5.09e-07!5;UBERON:0004117!5.09e-07!5;UBERON:0007689!5.09e-07!5;UBERON:0007123!5.09e-07!5;UBERON:0003091!5.09e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.35e-21;8!UBERON:0003135;1.74e-15;11!UBERON:0003133;9.43e-10;44!UBERON:0002046;3.35e-09;5!UBERON:0000991;1.32e-08;21!UBERON:0003101;2.93e-08;22!UBERON:0000079;2.93e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.35e-21,8;UBERON:0003135,1.74e-15,11;UBERON:0002046,3.22e-09,5;UBERON:0004117,3.22e-09,5;UBERON:0007689,3.22e-09,5;UBERON:0007123,3.22e-09,5;UBERON:0003091,3.22e-09,5;UBERON:0000991,1.32e-08,21;UBERON:0009196,1.32e-08,21;UBERON:0009117,1.32e-08,21;UBERON:0005564,1.32e-08,21;UBERON:0004176,2.93e-08,22;UBERON:0003101,2.93e-08,22;UBERON:0000079,2.93e-08,22;UBERON:0003133,3.11e-08,48;UBERON:0005156,7.84e-07,59;UBERON:0000990,7.84e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.621966330092223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,3.72562661089452,0,0,0.643012593860077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91535212503494,0,2.20547758883628,0,0,0,0,0,0,0,0,0,1.45771421354797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:60118628..60118633,- | |||
}} |
Latest revision as of 10:45, 25 July 2015
Short description: | p@chr16:60118628..60118633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:60118628..60118633, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.14e-23 | 7 |
germ cell | 1.14e-23 | 7 |
epithelial cell of uterus | 7.25e-08 | 6 |
stromal cell of endometrium | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 7.35e-21 | 8 |
male reproductive organ | 1.74e-15 | 11 |
thyroid gland | 3.22e-09 | 5 |
pharyngeal pouch | 3.22e-09 | 5 |
thyroid diverticulum | 3.22e-09 | 5 |
pharyngeal pouch 2 | 3.22e-09 | 5 |
thyroid primordium | 3.22e-09 | 5 |
gonad | 1.32e-08 | 21 |
indifferent external genitalia | 1.32e-08 | 21 |
indifferent gonad | 1.32e-08 | 21 |
gonad primordium | 1.32e-08 | 21 |
external genitalia | 2.93e-08 | 22 |
male organism | 2.93e-08 | 22 |
male reproductive system | 2.93e-08 | 22 |
reproductive organ | 3.11e-08 | 48 |
reproductive structure | 7.84e-07 | 59 |
reproductive system | 7.84e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.91e-41 | 1 |
hematopoietic system disease | 3.81e-21 | 2 |
cardiovascular system disease | 2.80e-11 | 4 |
germ cell and embryonal cancer | 2.93e-08 | 22 |
germ cell cancer | 2.93e-08 | 22 |
female reproductive endometrioid cancer | 7.25e-08 | 6 |