FFCP PHASE1:Hg19::chr16:56553882..56553992,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=967 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BXC9 | |||
|association_with_transcript=15bp_to_ENST00000245157,NM_031885,uc002ejd.2,uc010ccg.2_5end | |||
|cluster_id=chr16:56553882..56553992,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_BBS2_5end | |||
|id=chr16:56553882..56553992,- | |||
|ontology_enrichment_celltype=CL:0000791!5.42e-07!18;CL:0000789!5.42e-07!18;CL:0002420!5.42e-07!18;CL:0002419!5.42e-07!18;CL:0000790!5.42e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.77e-07;18!CL:0000789;5.77e-07;18!CL:0002419;5.77e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.42e-07,18;CL:0000789,5.42e-07,18;CL:0002420,5.42e-07,18;CL:0002419,5.42e-07,18;CL:0000790,5.42e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;5.77e-07;18!UBERON:0006601;6.78e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.43e-31!115;UBERON:0001049!2.92e-29!57;UBERON:0005068!2.92e-29!57;UBERON:0006241!2.92e-29!57;UBERON:0007135!2.92e-29!57;UBERON:0002616!7.20e-25!59;UBERON:0003080!8.15e-25!42;UBERON:0002780!1.68e-24!41;UBERON:0001890!1.68e-24!41;UBERON:0006240!1.68e-24!41;UBERON:0001017!1.59e-22!82;UBERON:0000955!2.33e-22!69;UBERON:0006238!2.33e-22!69;UBERON:0005743!3.36e-22!86;UBERON:0000073!1.97e-21!94;UBERON:0001016!1.97e-21!94;UBERON:0002020!2.15e-20!34;UBERON:0003528!2.15e-20!34;UBERON:0001893!2.97e-20!34;UBERON:0002791!1.04e-19!33;UBERON:0003075!2.04e-19!86;UBERON:0007284!2.04e-19!86;UBERON:0001869!5.86e-19!32;UBERON:0002346!2.20e-18!90;UBERON:0000153!5.95e-15!129;UBERON:0007811!5.95e-15!129;UBERON:0002619!1.03e-14!22;UBERON:0003056!1.38e-14!61;UBERON:0000956!1.43e-14!25;UBERON:0000203!1.43e-14!25;UBERON:0000033!3.29e-14!123;UBERON:0001950!1.86e-13!20;UBERON:0004121!2.35e-13!169;UBERON:0000924!6.15e-13!173;UBERON:0006601!6.15e-13!173;UBERON:0000475!7.00e-09!365;UBERON:0002308!2.41e-07!9;UBERON:0000125!2.41e-07!9;UBERON:0002420!3.00e-07!9;UBERON:0007245!3.00e-07!9;UBERON:0010009!3.00e-07!9;UBERON:0010011!3.00e-07!9;UBERON:0000454!3.00e-07!9;UBERON:0000025!3.91e-07!194;UBERON:0000477!5.62e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.39e-18;41!UBERON:0001890;8.39e-18;41!UBERON:0003528;2.00e-17;34!UBERON:0002020;2.00e-17;34!UBERON:0002791;2.64e-17;32!UBERON:0001893;2.77e-17;34!UBERON:0001869;3.45e-17;32!UBERON:0000073;9.83e-16;53!UBERON:0002616;9.83e-16;53!UBERON:0002619;1.00e-14;22!UBERON:0000956;1.50e-14;25!UBERON:0000203;1.50e-14;25!UBERON:0001950;1.83e-13;20!UBERON:0000955;4.80e-11;68!UBERON:0001017;1.90e-10;75!UBERON:0001016;2.56e-09;83!UBERON:0007023;1.59e-08;114!UBERON:0000125;2.40e-07;9!UBERON:0002308;2.40e-07;9!UBERON:0002420;2.97e-07;9!UBERON:0007245;2.97e-07;9!UBERON:0010009;2.97e-07;9!UBERON:0010011;2.97e-07;9!UBERON:0000454;2.97e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.70e-30,114;UBERON:0001049,6.38e-29,56;UBERON:0005068,6.38e-29,56;UBERON:0006241,6.38e-29,56;UBERON:0007135,6.38e-29,56;UBERON:0000073,6.35e-27,53;UBERON:0002616,6.35e-27,53;UBERON:0002780,1.68e-24,41;UBERON:0001890,1.68e-24,41;UBERON:0003080,1.68e-24,41;UBERON:0006240,1.68e-24,41;UBERON:0001017,3.57e-22,81;UBERON:0000955,5.22e-22,68;UBERON:0006238,5.22e-22,68;UBERON:0001016,2.54e-21,89;UBERON:0003528,2.15e-20,34;UBERON:0002020,2.15e-20,34;UBERON:0001893,2.97e-20,34;UBERON:0002791,4.33e-19,32;UBERON:0001869,5.86e-19,32;UBERON:0003075,1.51e-18,82;UBERON:0007284,1.51e-18,82;UBERON:0002346,1.63e-17,86;UBERON:0003056,7.80e-15,61;UBERON:0002619,1.03e-14,22;UBERON:0010314,1.36e-14,132;UBERON:0000956,1.43e-14,25;UBERON:0000203,1.43e-14,25;UBERON:0001950,1.86e-13,20;UBERON:0010371,2.40e-13,104;UBERON:0004121,2.17e-12,171;UBERON:0000924,2.17e-12,171;UBERON:0006601,2.17e-12,171;UBERON:0011216,4.02e-11,223;UBERON:0000125,2.41e-07,9;UBERON:0002308,2.41e-07,9;UBERON:0002420,3.00e-07,9;UBERON:0007245,3.00e-07,9;UBERON:0010009,3.00e-07,9;UBERON:0010011,3.00e-07,9;UBERON:0000454,3.00e-07,9;UBERON:0000025,4.45e-07,192 | |||
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| |||
|short_description=p1@BBS2 | |||
}} |
Latest revision as of 01:43, 17 September 2015
Short description: | p1@BBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BBS2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 15bp_to_ENST00000245157, NM_031885, uc002ejd.2, uc010ccg.2_5end |
EntrezGene: | BBS2 |
HGNC: | 967 |
UniProt: | Q9BXC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.42e-07 | 18 |
alpha-beta T cell | 5.42e-07 | 18 |
immature T cell | 5.42e-07 | 18 |
mature T cell | 5.42e-07 | 18 |
immature alpha-beta T cell | 5.42e-07 | 18 |