FFCP PHASE1:Hg19::chr16:53468570..53468610,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9894 | |||
|TSSclassifier=strong | |||
|UniProt=Q08999 | |||
|association_with_transcript=-29bp_to_X74594_5end | |||
|cluster_id=chr16:53468570..53468610,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_RBL2_5end | |||
|id=chr16:53468570..53468610,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.99e-12!18;CL:0000789!4.99e-12!18;CL:0002420!4.99e-12!18;CL:0002419!4.99e-12!18;CL:0000790!4.99e-12!18;CL:0000542!2.04e-09!53;CL:0000051!2.04e-09!53;CL:0000838!3.02e-09!52;CL:0000625!1.38e-08!11;CL:0000738!2.78e-08!140;CL:0000084!3.48e-08!25;CL:0000827!3.48e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.68e-24;18!CL:0000789;3.68e-24;18!CL:0002419;3.68e-24;18!CL:0000625;4.92e-20;11!CL:0000084;5.56e-16;25!CL:0000542;2.17e-11;53!CL:0000624;9.23e-08;6!CL:0000236;9.63e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.49e-24,18;CL:0000789,3.49e-24,18;CL:0002420,3.49e-24,18;CL:0002419,3.49e-24,18;CL:0000790,3.49e-24,18;CL:0000625,1.14e-19,11;CL:0000838,5.31e-17,52;CL:0000542,1.58e-16,53;CL:0000051,1.58e-16,53;CL:0000084,5.35e-16,25;CL:0000827,5.35e-16,25;CL:0000738,2.70e-09,136;CL:0000624,4.46e-08,6;CL:0002087,1.63e-07,115;CL:0002031,1.84e-07,120;CL:0000236,3.94e-07,14;CL:0000898,9.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.68e-24;18!CL:0000051;2.17e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-17!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.12e-12;15!UBERON:0000179;6.12e-12;15!UBERON:0000463;6.12e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.82e-12,15;UBERON:0000179,3.82e-12,15;UBERON:0000463,3.82e-12,15;UBERON:0007023,6.41e-09,114 | |||
|phase1_expression=1.2717486548939,0.642301571672949,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0,0.408001382488506,0,0.572471974262113,0.273748850145768,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,1.91914699048606,0.464448369948228,0,0,0,0.0774672005803016,0.284338464974843,0.293600439334847,1.10799081706375,0,1.08505435357926,0.671746422719773,0.647787332037959,0.257575567634187,0.726991193897824,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,1.03423704220986,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0,0,0.329851300186716,0.598390972864896,0,0,0,0.622822248995575,0,0,0,0.605399502633369,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.561643155732475,0.600707571366025,0.964353520182481,0.285012743741249,0.39783335439818,0.365328307529268,0,4.36910889009705,1.77901850772711,2.13365111283254,2.00197993518006,2.29900975981793,0.661044872784862,4.77026877267682,2.27685187643779,0.587237189370939,1.52909291250092,0,0,0.526768169550154,1.96709770113833,0.786021525498329,2.87842098599313,3.34372990781356,5.54067853277104,1.4203434172042,3.89653456815823,3.11949279278486,2.94605907474837,4.2091439970888,7.31170432165542,1.15282187753108,1.43065282315866,2.63100647365882,1.93445012450094,6.37566788617116,7.8591878475892,8.56130649887082,5.22677619024884,2.49280553934646,4.21542542962113,3.4362744548263,5.81945291644857,4.45991580053735,7.1619179924206,4.75226022224187,4.06552821509986,6.91127700233859,8.74515085866421,5.44587679701239,3.28451198768419,2.01606743224732,1.06976078313403,2.17236605824198,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0.795285947051099,0.486634870302636,0.0945348171640679,0.221729397462564,0.351339142772504,0.851363990735132,0,0,0.97364218096405,0.696518949197069,1.32957960518865,1.43094374583205,0,1.11437250398869,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,1.06729878806013,0.66944122552934,0,0,0.24406205754817,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,7.75560528296651,0,0,0.25326102332916,0.529636723252875,0.573673241497627,0,0.560677600142307,0,0,0.933633106199299,0.404132016209064,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0.206651562351531,1.18800285728205,0,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0,0.179389635688862,0.427114777637135,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,1.18143432568886,0.389748020644795,0,0.0920498986422993,0.323292113637624,2.13005755509969,0.201504196455281,0,0.386521706326594,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,3.12899064659632,0,0,0,0,0.118306800039844,0,0.482022059766964,0,0,0.237270619111097,0,0.196221465125346,0,0.738155454624648,0,0,0,2.53510069643662,0,1.77236972004421,0.441463099414651,0.245976877086227,0.171567810298526,0.109750285408626,1.1240175325762,0,0,0,0,0,0.34779121492523,0.70445216541493,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0.738651018262192,0.468008530278475,0.445893486866185,0.93733833986777,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,2.46331618947972,1.58487181223807,0.829312462163088,0.144119953416961,1.00993946741104,0,0,2.34434894420094,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.428933980974443,0,0.823240336780769,0,0.355391948742546,0,0,0,0.499864955910285,0,0.502257091432126,0,0,1.14861935834114,0,0.289562613335158,0.410952645100767,0.716243852959582,0.560425719967636,1.57624608161542,1.07813787429759,0.898401253958239,0,0,1.54657762555539,0.167516265334349,0,1.49801404789436,0,0.828831026872071,0.36807447515742,0,0.271265023699736,0.207970861530807,0,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0,0,0.260650843404249,0.195801157462741,0,1.86091223510599,0.862856803274467,1.49418580924822,0,0,0,0.496215615637554,0.306923946576125,0,0.512556597022804,2.04682899626681,0.482561763430822,0,0,0,0.164254312027618,0,0.232420756919918,0.241718899183244,0,0,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0,0,0,0,0.618246069886334,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0,0.154048617114644,0.460511024178389,0,0.429680979473094,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0.638063562472921,0,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0,0.855877976067841,0,0,0.359744915166629,0,0,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,0.211107635297664,0.987884678879706,0,0.349934720244983,0.19244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| |||
|short_description=p5@RBL2 | |||
}} |
Latest revision as of 22:40, 16 September 2015
Short description: | p5@RBL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RBL2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -29bp_to_X74594_5end |
EntrezGene: | RBL2 |
HGNC: | 9894 |
UniProt: | Q08999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.49e-24 | 18 |
alpha-beta T cell | 3.49e-24 | 18 |
immature T cell | 3.49e-24 | 18 |
mature T cell | 3.49e-24 | 18 |
immature alpha-beta T cell | 3.49e-24 | 18 |
CD8-positive, alpha-beta T cell | 1.14e-19 | 11 |
lymphoid lineage restricted progenitor cell | 5.31e-17 | 52 |
lymphocyte | 1.58e-16 | 53 |
common lymphoid progenitor | 1.58e-16 | 53 |
T cell | 5.35e-16 | 25 |
pro-T cell | 5.35e-16 | 25 |
leukocyte | 2.70e-09 | 136 |
CD4-positive, alpha-beta T cell | 4.46e-08 | 6 |
nongranular leukocyte | 1.63e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 1.84e-07 | 120 |
B cell | 3.94e-07 | 14 |
naive T cell | 9.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.82e-12 | 15 |
haemolymphatic fluid | 3.82e-12 | 15 |
organism substance | 3.82e-12 | 15 |
adult organism | 6.41e-09 | 114 |