FFCP PHASE1:Hg19::chr16:50059125..50059180,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26759 | |||
|TSSclassifier=strong | |||
|UniProt=B8YCP3,C9JT53,Q8N9A8 | |||
|association_with_transcript=0bp_to_ENST00000389134,ENST00000427478,ENST00000458059_5end | |||
|cluster_id=chr16:50059125..50059180,+ | |||
|description=CAGE_peak_1_at_TMEM188_5end | |||
|id=chr16:50059125..50059180,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.22e-17!140;CL:0000766!5.26e-17!76;CL:0002087!2.56e-14!119;CL:0002031!6.32e-14!124;CL:0002194!5.40e-13!63;CL:0000576!5.40e-13!63;CL:0000040!5.40e-13!63;CL:0000559!5.40e-13!63;CL:0000839!6.33e-13!70;CL:0002009!9.57e-13!65;CL:0000557!6.03e-12!71;CL:0002057!3.94e-10!42;CL:0000134!4.68e-10!358;CL:0002320!2.05e-09!365;CL:0000860!8.94e-09!45;CL:0000037!1.22e-07!172;CL:0000566!1.22e-07!172;CL:0000219!1.28e-07!390;CL:0000048!2.24e-07!430;CL:0002032!2.51e-07!165;CL:0000837!2.51e-07!165;CL:0000723!5.64e-07!436;CL:0000791!6.73e-07!18;CL:0000789!6.73e-07!18;CL:0002420!6.73e-07!18;CL:0002419!6.73e-07!18;CL:0000790!6.73e-07!18;CL:0000034!7.17e-07!444;CL:0000094!9.35e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.23e-08;69!CL:0000473;3.72e-08;39!CL:0000234;3.72e-08;39!CL:0000576;5.16e-08;48!CL:0000791;4.14e-07;18!CL:0000789;4.14e-07;18!CL:0002419;4.14e-07;18!CL:0000094;8.45e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.15e-18,72;CL:0000738,1.46e-17,136;CL:0002087,7.15e-15,115;CL:0002031,1.92e-14,120;CL:0002194,6.29e-14,59;CL:0000576,6.29e-14,59;CL:0000040,6.29e-14,59;CL:0000559,6.29e-14,59;CL:0000839,9.18e-14,66;CL:0002009,1.24e-13,61;CL:0000473,2.99e-13,48;CL:0000234,2.99e-13,48;CL:0000557,1.03e-12,67;CL:0000134,1.34e-10,354;CL:0000860,3.94e-10,42;CL:0002057,3.94e-10,42;CL:0002320,6.21e-10,361;CL:0000219,4.61e-08,386;CL:0000037,7.36e-08,168;CL:0002032,1.51e-07,161;CL:0000837,1.51e-07,161;CL:0000048,1.52e-07,427;CL:0000723,3.89e-07,433;CL:0000034,4.98e-07,441;CL:0000791,6.73e-07,18;CL:0000789,6.73e-07,18;CL:0002420,6.73e-07,18;CL:0002419,6.73e-07,18;CL:0000790,6.73e-07,18;CL:0000094,9.35e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.87e-08;42!CL:0000790;4.14e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.82e-15!102;UBERON:0003061!7.82e-15!102;UBERON:0002193!1.20e-13!112;UBERON:0002371!7.58e-11!80;UBERON:0004765!1.06e-10!101;UBERON:0001434!1.06e-10!101;UBERON:0001474!1.65e-09!86;UBERON:0001049!1.81e-09!57;UBERON:0005068!1.81e-09!57;UBERON:0006241!1.81e-09!57;UBERON:0007135!1.81e-09!57;UBERON:0002384!2.92e-09!375;UBERON:0002616!9.43e-09!59;UBERON:0007023!1.84e-08!115;UBERON:0003080!1.91e-08!42;UBERON:0002780!4.24e-08!41;UBERON:0001890!4.24e-08!41;UBERON:0006240!4.24e-08!41;UBERON:0001017!5.02e-07!82;UBERON:0000955!6.09e-07!69;UBERON:0006238!6.09e-07!69;UBERON:0002405!6.79e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.69e-15,98;UBERON:0003061,1.69e-15,98;UBERON:0002193,3.29e-14,108;UBERON:0002371,1.81e-11,76;UBERON:0001434,6.46e-11,100;UBERON:0004765,2.66e-10,90;UBERON:0002405,2.83e-10,93;UBERON:0001474,5.10e-10,82;UBERON:0002384,9.07e-10,371;UBERON:0001049,3.92e-09,56;UBERON:0005068,3.92e-09,56;UBERON:0006241,3.92e-09,56;UBERON:0007135,3.92e-09,56;UBERON:0000073,1.83e-08,53;UBERON:0002616,1.83e-08,53;UBERON:0007023,2.59e-08,114;UBERON:0002780,4.24e-08,41;UBERON:0001890,4.24e-08,41;UBERON:0003080,4.24e-08,41;UBERON:0006240,4.24e-08,41;UBERON:0001017,9.30e-07,81 | |||
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| |||
|short_description=p1@TMEM188 | |||
}} |
Latest revision as of 20:04, 16 September 2015
Short description: | p1@TMEM188 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM188_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389134, ENST00000427478, ENST00000458059_5end |
EntrezGene: | TMEM188 |
HGNC: | 26759 |
UniProt: | B8YCP3C9JT53Q8N9A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.15e-18 | 72 |
leukocyte | 1.46e-17 | 136 |
nongranular leukocyte | 7.15e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.92e-14 | 120 |
monopoietic cell | 6.29e-14 | 59 |
monocyte | 6.29e-14 | 59 |
monoblast | 6.29e-14 | 59 |
promonocyte | 6.29e-14 | 59 |
myeloid lineage restricted progenitor cell | 9.18e-14 | 66 |
macrophage dendritic cell progenitor | 1.24e-13 | 61 |
defensive cell | 2.99e-13 | 48 |
phagocyte | 2.99e-13 | 48 |
granulocyte monocyte progenitor cell | 1.03e-12 | 67 |
mesenchymal cell | 1.34e-10 | 354 |
classical monocyte | 3.94e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.94e-10 | 42 |
connective tissue cell | 6.21e-10 | 361 |
motile cell | 4.61e-08 | 386 |
hematopoietic stem cell | 7.36e-08 | 168 |
hematopoietic oligopotent progenitor cell | 1.51e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-07 | 161 |
multi fate stem cell | 1.52e-07 | 427 |
somatic stem cell | 3.89e-07 | 433 |
stem cell | 4.98e-07 | 441 |
mature alpha-beta T cell | 6.73e-07 | 18 |
alpha-beta T cell | 6.73e-07 | 18 |
immature T cell | 6.73e-07 | 18 |
mature T cell | 6.73e-07 | 18 |
immature alpha-beta T cell | 6.73e-07 | 18 |
granulocyte | 9.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.69e-15 | 98 |
blood island | 1.69e-15 | 98 |
hemolymphoid system | 3.29e-14 | 108 |
bone marrow | 1.81e-11 | 76 |
skeletal system | 6.46e-11 | 100 |
skeletal element | 2.66e-10 | 90 |
immune system | 2.83e-10 | 93 |
bone element | 5.10e-10 | 82 |
connective tissue | 9.07e-10 | 371 |
neural tube | 3.92e-09 | 56 |
neural rod | 3.92e-09 | 56 |
future spinal cord | 3.92e-09 | 56 |
neural keel | 3.92e-09 | 56 |
regional part of nervous system | 1.83e-08 | 53 |
regional part of brain | 1.83e-08 | 53 |
adult organism | 2.59e-08 | 114 |
regional part of forebrain | 4.24e-08 | 41 |
forebrain | 4.24e-08 | 41 |
anterior neural tube | 4.24e-08 | 41 |
future forebrain | 4.24e-08 | 41 |
central nervous system | 9.30e-07 | 81 |