FFCP PHASE1:Hg19::chr16:30080217..30080237,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=226 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=414 | |||
|TSSclassifier=strong | |||
|UniProt=A4UCT0 | |||
|association_with_transcript=36bp_to_EF036497_5end | |||
|cluster_id=chr16:30080217..30080237,+ | |||
|coexpression_cluster_id=C1219 | |||
|description=CAGE_peak_14_at_ALDOA_5end | |||
|id=chr16:30080217..30080237,+ | |||
|ontology_enrichment_celltype=CL:0000359!8.94e-09!32;CL:0000192!1.02e-08!42;CL:0000514!1.02e-08!42;CL:0002057!7.38e-08!42;CL:0000680!8.25e-08!57;CL:0000056!8.25e-08!57;CL:0000355!8.25e-08!57;CL:0000393!1.24e-07!60;CL:0000211!1.24e-07!60;CL:0000187!1.88e-07!54;CL:0000222!2.34e-07!119;CL:0000860!4.71e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.23e-09;33!CL:0002057;6.23e-09;33!CL:0000359;1.49e-08;32!CL:0000473;1.85e-08;39!CL:0000234;1.85e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.50e-09,32;CL:0000473,1.03e-08,48;CL:0000234,1.03e-08,48;CL:0000192,2.65e-08,43;CL:0000514,2.65e-08,43;CL:0000860,6.52e-08,42;CL:0002057,6.52e-08,42;CL:0000393,1.70e-07,61;CL:0000211,1.70e-07,61;CL:0000680,4.23e-07,58;CL:0000056,4.23e-07,58;CL:0000355,4.23e-07,58;CL:0000222,5.21e-07,121;CL:0000187,6.09e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.07e-11!70;UBERON:0001637!1.13e-10!42;UBERON:0003509!1.13e-10!42;UBERON:0004572!1.13e-10!42;UBERON:0000914!3.87e-10!83;UBERON:0002329!3.87e-10!83;UBERON:0003077!3.87e-10!83;UBERON:0003059!3.87e-10!83;UBERON:0007282!3.87e-10!83;UBERON:0009618!3.87e-10!83;UBERON:0007285!3.87e-10!83;UBERON:0000486!6.95e-10!82;UBERON:0001134!1.43e-09!61;UBERON:0002036!1.43e-09!61;UBERON:0003082!1.43e-09!61;UBERON:0002204!7.03e-09!167;UBERON:0002385!8.90e-09!63;UBERON:0001015!8.90e-09!63;UBERON:0000383!8.90e-09!63;UBERON:0004573!4.04e-08!33;UBERON:0004571!4.04e-08!33;UBERON:0004872!1.02e-07!84;UBERON:0001981!5.91e-07!60;UBERON:0007500!5.91e-07!60;UBERON:0004537!5.91e-07!60;UBERON:0006965!5.91e-07!60;UBERON:0000926!8.62e-07!448;UBERON:0004120!8.62e-07!448;UBERON:0006603!8.62e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.83e-08;42!UBERON:0003509;3.83e-08;42!UBERON:0004572;3.83e-08;42!UBERON:0004573;4.99e-08;33!UBERON:0004571;4.99e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,7.27e-12,42;UBERON:0003509,7.27e-12,42;UBERON:0004572,7.27e-12,42;UBERON:0007524,2.62e-11,73;UBERON:0007503,2.94e-11,78;UBERON:0003077,5.45e-11,72;UBERON:0007285,5.45e-11,72;UBERON:0002329,8.33e-11,71;UBERON:0003059,8.33e-11,71;UBERON:0007282,8.33e-11,71;UBERON:0004290,8.33e-11,71;UBERON:0009618,8.33e-11,71;UBERON:0000926,9.56e-11,315;UBERON:0004120,9.56e-11,315;UBERON:0006603,9.56e-11,315;UBERON:0000486,1.62e-09,83;UBERON:0004573,2.89e-09,33;UBERON:0004571,2.89e-09,33;UBERON:0001134,5.95e-09,62;UBERON:0002036,5.95e-09,62;UBERON:0003082,5.95e-09,62;UBERON:0004872,2.68e-08,83;UBERON:0002385,3.63e-08,64;UBERON:0001015,3.63e-08,64;UBERON:0000383,3.63e-08,64;UBERON:0002204,4.00e-08,167;UBERON:0007500,5.05e-08,59;UBERON:0001981,5.05e-08,59;UBERON:0004537,5.05e-08,59;UBERON:0006965,5.05e-08,59;UBERON:0003081,1.21e-07,203;UBERON:0005256,1.71e-07,122 | |||
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| |||
|short_description=p14@ALDOA | |||
}} |
Latest revision as of 06:21, 16 September 2015
Short description: | p14@ALDOA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ALDOA_5end |
Coexpression cluster: | C1219_Smooth_Tracheal_penis_tongue_skeletal_leiomyoma_diaphragm |
Association with transcript: | 36bp_to_EF036497_5end |
EntrezGene: | ALDOA |
HGNC: | 414 |
UniProt: | A4UCT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.50e-09 | 32 |
defensive cell | 1.03e-08 | 48 |
phagocyte | 1.03e-08 | 48 |
smooth muscle cell | 2.65e-08 | 43 |
smooth muscle myoblast | 2.65e-08 | 43 |
classical monocyte | 6.52e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.52e-08 | 42 |
electrically responsive cell | 1.70e-07 | 61 |
electrically active cell | 1.70e-07 | 61 |
muscle precursor cell | 4.23e-07 | 58 |
myoblast | 4.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.23e-07 | 58 |
mesodermal cell | 5.21e-07 | 121 |
muscle cell | 6.09e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
artery | 7.27e-12 | 42 |
arterial blood vessel | 7.27e-12 | 42 |
arterial system | 7.27e-12 | 42 |
dense mesenchyme tissue | 2.62e-11 | 73 |
epithelial vesicle | 2.94e-11 | 78 |
paraxial mesoderm | 5.45e-11 | 72 |
presumptive paraxial mesoderm | 5.45e-11 | 72 |
somite | 8.33e-11 | 71 |
presomitic mesoderm | 8.33e-11 | 71 |
presumptive segmental plate | 8.33e-11 | 71 |
dermomyotome | 8.33e-11 | 71 |
trunk paraxial mesoderm | 8.33e-11 | 71 |
mesoderm | 9.56e-11 | 315 |
mesoderm-derived structure | 9.56e-11 | 315 |
presumptive mesoderm | 9.56e-11 | 315 |
multilaminar epithelium | 1.62e-09 | 83 |
systemic artery | 2.89e-09 | 33 |
systemic arterial system | 2.89e-09 | 33 |
skeletal muscle tissue | 5.95e-09 | 62 |
striated muscle tissue | 5.95e-09 | 62 |
myotome | 5.95e-09 | 62 |
splanchnic layer of lateral plate mesoderm | 2.68e-08 | 83 |
muscle tissue | 3.63e-08 | 64 |
musculature | 3.63e-08 | 64 |
musculature of body | 3.63e-08 | 64 |
musculoskeletal system | 4.00e-08 | 167 |
epithelial tube open at both ends | 5.05e-08 | 59 |
blood vessel | 5.05e-08 | 59 |
blood vasculature | 5.05e-08 | 59 |
vascular cord | 5.05e-08 | 59 |
lateral plate mesoderm | 1.21e-07 | 203 |
trunk mesenchyme | 1.71e-07 | 122 |