FFCP PHASE1:Hg19::chr16:2569313..2569335,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:2569313..2569335,+ | |||
|coexpression_cluster_id=C1758 | |||
|description=CAGE_peak_at_chr16:2569313..2569335,+ | |||
|id=chr16:2569313..2569335,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.72e-13!42;CL:0000860!3.00e-12!45;CL:0000766!3.35e-12!76;CL:0002194!4.01e-12!63;CL:0000576!4.01e-12!63;CL:0000040!4.01e-12!63;CL:0000559!4.01e-12!63;CL:0002009!1.86e-11!65;CL:0000839!1.15e-10!70;CL:0000557!3.35e-10!71 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.64e-17;39!CL:0000234;6.64e-17;39!CL:0000860;3.96e-16;33!CL:0002057;3.96e-16;33!CL:0000576;8.62e-10;48!CL:0000766;8.64e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.01e-19,48;CL:0000234,2.01e-19,48;CL:0000766,1.16e-15,72;CL:0000860,2.10e-15,42;CL:0002057,2.10e-15,42;CL:0002194,2.46e-15,59;CL:0000576,2.46e-15,59;CL:0000040,2.46e-15,59;CL:0000559,2.46e-15,59;CL:0002009,2.86e-14,61;CL:0000839,2.81e-13,66;CL:0000557,7.95e-13,67;CL:0000763,1.86e-08,108;CL:0000049,1.86e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.52e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.90e-10!102;UBERON:0003061!3.90e-10!102;UBERON:0002193!4.03e-10!112;UBERON:0002371!4.63e-09!80;UBERON:0007023!4.41e-08!115;UBERON:0001474!6.55e-08!86;UBERON:0003081!2.16e-07!216;UBERON:0004765!5.97e-07!101;UBERON:0001434!5.97e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.16e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.16e-12,98;UBERON:0003061,3.16e-12,98;UBERON:0002371,7.19e-12,76;UBERON:0002193,9.50e-12,108;UBERON:0001474,1.25e-10,82;UBERON:0004765,1.07e-09,90;UBERON:0001434,1.79e-09,100;UBERON:0002405,4.78e-09,93;UBERON:0002619,6.33e-07,22;UBERON:0003081,8.55e-07,203;UBERON:0005423,9.23e-07,581;UBERON:0000923,9.74e-07,560;UBERON:0010316,9.74e-07,560;UBERON:0005291,9.74e-07,560;UBERON:0006598,9.74e-07,560;UBERON:0010317,9.74e-07,560;UBERON:0002532,9.74e-07,560 | |||
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| |||
|short_description=p@chr16:2569313..2569335,+ | |||
}} |
Latest revision as of 07:26, 25 July 2015
Short description: | p@chr16:2569313..2569335, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:2569313..2569335, + |
Coexpression cluster: | C1758_Monocytederived_Neutrophils_medial_Whole_Smooth_leiomyoma_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.01e-19 | 48 |
phagocyte | 2.01e-19 | 48 |
myeloid leukocyte | 1.16e-15 | 72 |
classical monocyte | 2.10e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-15 | 42 |
monopoietic cell | 2.46e-15 | 59 |
monocyte | 2.46e-15 | 59 |
monoblast | 2.46e-15 | 59 |
promonocyte | 2.46e-15 | 59 |
macrophage dendritic cell progenitor | 2.86e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.81e-13 | 66 |
granulocyte monocyte progenitor cell | 7.95e-13 | 67 |
myeloid cell | 1.86e-08 | 108 |
common myeloid progenitor | 1.86e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.16e-12 | 98 |
blood island | 3.16e-12 | 98 |
bone marrow | 7.19e-12 | 76 |
hemolymphoid system | 9.50e-12 | 108 |
bone element | 1.25e-10 | 82 |
skeletal element | 1.07e-09 | 90 |
skeletal system | 1.79e-09 | 100 |
immune system | 4.78e-09 | 93 |
regional part of cerebral cortex | 6.33e-07 | 22 |
lateral plate mesoderm | 8.55e-07 | 203 |
developing anatomical structure | 9.23e-07 | 581 |
germ layer | 9.74e-07 | 560 |
germ layer / neural crest | 9.74e-07 | 560 |
embryonic tissue | 9.74e-07 | 560 |
presumptive structure | 9.74e-07 | 560 |
germ layer / neural crest derived structure | 9.74e-07 | 560 |
epiblast (generic) | 9.74e-07 | 560 |