FFCP PHASE1:Hg19::chr16:21314360..21314392,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2418 | |||
|TSSclassifier=strong | |||
|UniProt=Q14894 | |||
|association_with_transcript=0bp_to_ENST00000219599_5end | |||
|cluster_id=chr16:21314360..21314392,- | |||
|description=CAGE_peak_3_at_CRYM_5end | |||
|id=chr16:21314360..21314392,- | |||
|ontology_enrichment_celltype=CL:0002009!1.33e-20!65;CL:0002194!5.45e-19!63;CL:0000576!5.45e-19!63;CL:0000040!5.45e-19!63;CL:0000559!5.45e-19!63;CL:0000557!5.72e-19!71;CL:0000766!4.33e-17!76;CL:0000839!6.13e-17!70;CL:0002057!1.39e-15!42;CL:0000860!1.06e-13!45;CL:0000763!1.15e-09!112;CL:0000049!1.15e-09!112;CL:0000451!3.87e-09!10;CL:0000738!8.66e-09!140;CL:0000063!8.71e-09!578;CL:0000990!2.78e-07!8;CL:0000219!4.02e-07!390;CL:0000134!6.17e-07!358;CL:0002031!7.82e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.34e-32;39!CL:0000234;4.34e-32;39!CL:0000860;1.44e-29;33!CL:0002057;1.44e-29;33!CL:0000576;7.26e-18;48!CL:0000766;1.77e-14;69!CL:0000235;1.21e-11;6!CL:0000148;3.31e-09;10!CL:0000784;1.66e-07;3!CL:0002567;2.24e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.63e-39,48;CL:0000234,2.63e-39,48;CL:0002009,1.07e-38,61;CL:0002194,2.43e-35,59;CL:0000576,2.43e-35,59;CL:0000040,2.43e-35,59;CL:0000559,2.43e-35,59;CL:0000557,3.44e-34,67;CL:0000839,1.96e-30,66;CL:0000860,3.65e-30,42;CL:0002057,3.65e-30,42;CL:0000766,7.56e-29,72;CL:0000763,3.37e-19,108;CL:0000049,3.37e-19,108;CL:0000738,5.94e-15,136;CL:0002031,3.87e-14,120;CL:0002087,5.36e-13,115;CL:0000235,1.50e-11,6;CL:0000219,2.13e-11,386;CL:0000037,5.93e-10,168;CL:0002032,2.80e-09,161;CL:0000837,2.80e-09,161;CL:0000148,4.24e-09,10;CL:0000541,4.24e-09,10;CL:0000988,6.63e-09,177;CL:0000134,1.07e-08,354;CL:0002320,3.25e-08,361;CL:0000784,1.72e-07,3;CL:0002567,2.25e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.53e-23;42 | |||
|ontology_enrichment_disease=DOID:2394!6.18e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.00e-14;14!DOID:120;3.62e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.14e-14,14;DOID:120,3.26e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.35e-18!80;UBERON:0001474!3.11e-16!86;UBERON:0004765!1.35e-15!101;UBERON:0001434!1.35e-15!101;UBERON:0002390!9.20e-13!102;UBERON:0003061!9.20e-13!102;UBERON:0002193!5.47e-11!112;UBERON:0002405!6.17e-10!115;UBERON:0002204!2.27e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.64e-34,76;UBERON:0001474,4.52e-31,82;UBERON:0004765,7.46e-29,90;UBERON:0002405,6.28e-26,93;UBERON:0001434,1.05e-24,100;UBERON:0002390,5.60e-24,98;UBERON:0003061,5.60e-24,98;UBERON:0002193,1.24e-20,108;UBERON:0002204,3.08e-12,167;UBERON:0003081,2.59e-09,203;UBERON:0000926,1.66e-08,315;UBERON:0004120,1.66e-08,315;UBERON:0006603,1.66e-08,315;UBERON:0002384,4.47e-08,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.0821005894499457,0.236132343941038,0.786728553697808,3.83829398097213,0.619264493264304,0,0,0.739508020333575,0,0.142169232487422,0,1.66198622559563,2.60707781711184,2.82114131930607,0.223915474239924,1.6194683300949,1.03030227053675,0.726991193897824,1.13362783106643,0.485168122375632,2.32429036905685,6.57868620834921,5.57471467611186,1.43846196161075,2.0492856522328,1.41889337933151,7.58440497620561,7.74581620300591,6.77132432971709,1.12945403725563,1.36453075028923,2.69668181334102,6.12167784741805,9.30694178520671,7.03270838378945,0,0.598390972864896,0,5.22376629531451,14.1846306172785,5.60540024096017,1.00499466102697,2.08593167368081,2.82345498116652,4.23779651843358,12.8897172595648,11.076183560431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0.364295288292542,0,0.649094787309367,0.522389211897802,0.797747763113191,5.48528435902286,7.43593384014166,8.54352253057999,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,9.40105183773854,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0,0,1.18800285728205,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,2.31913023795956,1.63647672354501,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,1.09750285408626,0,0.603173834469785,0,0,0,0,0.115930404975077,0,0,0,0,0,0,2.21595305478658,3.04205544681009,3.56714789492948,2.81201501960331,0.16798212819886,0.425325291727159,4.92571874865666,2.03443756959773,0.383382679165211,0.492663237895943,0,0,0.144119953416961,0,4.31785681186749,9.54971063895694,4.68869788840188,5.13217338068116,1.02827492703324,2.10240140490742,2.5724378936752,0,0,0,1.68053230485111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,2.51128545716063,6.32501818449095,0,0,0,1.59259437334337,0.410952645100767,1.07436577943937,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0,0,0.955719759148911,0,0,0.206768026122887,0,0.320182673410333,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0.355123450626254,0.574890092096664,0.519254429183621,0.116210378459959,0,0.200506470303285,2.3941057123333,0,0,0.786746489756545,0,0.231046011313244,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0.661139661443912,0.384380134730212,2.04180339991335,0.910420027699949,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0,0.143411352204052,0,0,3.90237170477658,0.844430541190656,0.329294892959902,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,0,0.222886768554957,0,0.95497793895076,0.296964680832639,1.22864280839693,0,0.140669416410513,0.890469640183247,0,0,0,0.276283915531148,0,0,0.246169610922139,0,0.0898683511473268,0,0,1.08507746200627,0,0,0,0,0,0,0,3.62499787717397,0.1137934482855,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.957003479195758,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.632994193584081,0.163232808159148,0,0,0,0.265372693510018,0,0.296521128680622,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,1.65355761355942,0,0,0,0,0,0,0.832048038078832,0,1.66587075604442,0.0870592065804026,0,1.0319161948297,0,0,0,0.484945082442097,0,0.225980740780532,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0,0,1.58460277786965,0,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5737729029205,10.0594254092533,0,0.670869375198532,0,0,0.211200673038813,0.717149357331379,0.191915197319445,0,0,0,2.17199840701485,0.864221491201268,1.30634944043764,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0.638341257770182,1.08803560673895,0.5013797880454,0.612691153526923,0.983617892129413,0,0,0,0,0,0,0,0,0,0.454947352624943,2.56918800190471,0,0,0,0.447764408660622,0.701139929541673,1.10961172300523,2.84104507912634,3.27038272278348,3.55924488638614,6.86520205190771,2.57092570397506,1.39893480524502,0.443565449968902,2.23015474029183,4.49803112163605,0,1.24411862352257,1.32920857278997,2.08698024724694,1.35231848097497,1.52322084867518,0.406870733204662,3.27327586564607,1.93339002676479,2.32016879939247,2.3885753321917,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0.226705925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| |||
|short_description=p3@CRYM | |||
}} |
Latest revision as of 03:50, 25 September 2015
Short description: | p3@CRYM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRYM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000219599_5end |
EntrezGene: | CRYM |
HGNC: | 2418 |
UniProt: | Q14894 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.63e-39 | 48 |
phagocyte | 2.63e-39 | 48 |
macrophage dendritic cell progenitor | 1.07e-38 | 61 |
monopoietic cell | 2.43e-35 | 59 |
monocyte | 2.43e-35 | 59 |
monoblast | 2.43e-35 | 59 |
promonocyte | 2.43e-35 | 59 |
granulocyte monocyte progenitor cell | 3.44e-34 | 67 |
myeloid lineage restricted progenitor cell | 1.96e-30 | 66 |
classical monocyte | 3.65e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-30 | 42 |
myeloid leukocyte | 7.56e-29 | 72 |
myeloid cell | 3.37e-19 | 108 |
common myeloid progenitor | 3.37e-19 | 108 |
leukocyte | 5.94e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 3.87e-14 | 120 |
nongranular leukocyte | 5.36e-13 | 115 |
macrophage | 1.50e-11 | 6 |
motile cell | 2.13e-11 | 386 |
hematopoietic stem cell | 5.93e-10 | 168 |
hematopoietic oligopotent progenitor cell | 2.80e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-09 | 161 |
melanocyte | 4.24e-09 | 10 |
melanoblast | 4.24e-09 | 10 |
hematopoietic cell | 6.63e-09 | 177 |
mesenchymal cell | 1.07e-08 | 354 |
connective tissue cell | 3.25e-08 | 361 |
plasmacytoid dendritic cell | 1.72e-07 | 3 |
light melanocyte | 2.25e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.64e-34 | 76 |
bone element | 4.52e-31 | 82 |
skeletal element | 7.46e-29 | 90 |
immune system | 6.28e-26 | 93 |
skeletal system | 1.05e-24 | 100 |
hematopoietic system | 5.60e-24 | 98 |
blood island | 5.60e-24 | 98 |
hemolymphoid system | 1.24e-20 | 108 |
musculoskeletal system | 3.08e-12 | 167 |
lateral plate mesoderm | 2.59e-09 | 203 |
mesoderm | 1.66e-08 | 315 |
mesoderm-derived structure | 1.66e-08 | 315 |
presumptive mesoderm | 1.66e-08 | 315 |
connective tissue | 4.47e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.14e-14 | 14 |
female reproductive organ cancer | 3.26e-07 | 27 |