FFCP PHASE1:Hg19::chr15:79290607..79290619,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9875 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000560943_5end | |||
|cluster_id=chr15:79290607..79290619,- | |||
|description=CAGE_peak_7_at_RASGRF1_5end | |||
|id=chr15:79290607..79290619,- | |||
|ontology_enrichment_celltype=CL:0005020!1.17e-08!6;CL:0002138!1.17e-08!6;CL:0005022!1.17e-08!6;CL:0000840!4.08e-08!5;CL:0001029!4.08e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000322;6.14e-07;3!CL:0002178;6.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.14e-07,3;CL:0002178,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.31e-09;29!UBERON:0001041;2.68e-09;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;8.69e-10;2!DOID:3493;1.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.69e-10,2;DOID:3493,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0006331!1.08e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.66e-18;1!UBERON:0006518;2.66e-18;1!UBERON:0008949;2.66e-18;1!UBERON:0000101;2.66e-18;1!UBERON:0002167;2.66e-18;1!UBERON:0002048;1.43e-12;22!UBERON:0000117;1.43e-12;22!UBERON:0000171;1.43e-12;22!UBERON:0000170;1.43e-12;22!UBERON:0004903;8.69e-10;2!UBERON:0002173;8.69e-10;2!UBERON:0002186;8.69e-10;2!UBERON:0005178;1.84e-07;34!UBERON:0002224;1.84e-07;34!UBERON:0004821;6.14e-07;3!UBERON:0007499;6.14e-07;3!UBERON:0003215;6.14e-07;3!UBERON:0010368;6.14e-07;3!UBERON:0009911;6.14e-07;3!UBERON:0002299;6.14e-07;3!UBERON:0006524;6.14e-07;3!UBERON:0008874;6.14e-07;3!UBERON:0002169;6.14e-07;3!UBERON:0004894;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.66e-18,1;UBERON:0006518,2.66e-18,1;UBERON:0008949,2.66e-18,1;UBERON:0000101,2.66e-18,1;UBERON:0002167,2.66e-18,1;UBERON:0002048,1.43e-12,22;UBERON:0000117,1.43e-12,22;UBERON:0000171,1.43e-12,22;UBERON:0000170,1.43e-12,22;UBERON:0005597,1.43e-12,22;UBERON:0000118,1.43e-12,22;UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0005178,3.11e-08,34;UBERON:0002224,3.11e-08,34;UBERON:0005181,5.26e-08,35;UBERON:0005153,1.38e-07,37;UBERON:0008947,2.16e-07,38;UBERON:0003258,2.16e-07,38;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0.97364218096405,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29929802984966,0.462985512576611,0.761016608938393,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7887322147588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0.111443384277478,19.3212579828361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.26961417541674,0,0.0846733320657845,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,1.02447419488958,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,7.58190629230632,9.90387122127895,22.3689089887486,0,6.7187954845301,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4327107286519,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,8.14646939006517,0,0,0,0,0.485710993059139,0,0.795803100645473,0,0,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0.0802413666891683,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p7@RASGRF1 | |||
}} |
Latest revision as of 07:47, 19 September 2015
Short description: | p7@RASGRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RASGRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560943_5end |
EntrezGene: | RASGRF1 |
HGNC: | 9875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.14e-07 | 3 |
epithelial cell of stomach | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.66e-18 | 1 |
right lung lobe | 2.66e-18 | 1 |
lower lobe of lung | 2.66e-18 | 1 |
lobe of lung | 2.66e-18 | 1 |
right lung | 2.66e-18 | 1 |
lung | 1.43e-12 | 22 |
respiratory tube | 1.43e-12 | 22 |
respiration organ | 1.43e-12 | 22 |
pair of lungs | 1.43e-12 | 22 |
lung primordium | 1.43e-12 | 22 |
lung bud | 1.43e-12 | 22 |
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
thoracic cavity element | 3.11e-08 | 34 |
thoracic cavity | 3.11e-08 | 34 |
thoracic segment organ | 5.26e-08 | 35 |
epithelial bud | 1.38e-07 | 37 |
respiratory primordium | 2.16e-07 | 38 |
endoderm of foregut | 2.16e-07 | 38 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.69e-10 | 2 |
signet ring cell adenocarcinoma | 1.03e-09 | 2 |