FFCP PHASE1:Hg19::chr15:77907249..77907288,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21205 | |||
|TSSclassifier=strong | |||
|UniProt=Q96FE5 | |||
|association_with_transcript=104bp_to_AK027500_5end | |||
|cluster_id=chr15:77907249..77907288,- | |||
|coexpression_cluster_id=C837 | |||
|description=CAGE_peak_9_at_LINGO1_5end | |||
|id=chr15:77907249..77907288,- | |||
|ontology_enrichment_celltype=CL:0000540!1.01e-10!6;CL:0000031!1.01e-10!6;CL:0000404!1.01e-10!6;CL:0002322!3.42e-09!5;CL:0000148!4.03e-08!10;CL:0000541!4.03e-08!10;CL:0000047!8.40e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;2.05e-08;1!UBERON:0010227;2.05e-08;1!UBERON:0006601;3.21e-08;82 | |||
|ontology_enrichment_disease=DOID:171!1.66e-08!10;DOID:3095!1.39e-07!22;DOID:2994!1.39e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:171;6.58e-12;10!DOID:3095;4.37e-08;22!DOID:2994;4.37e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.63e-12,10;DOID:3095,4.19e-08,22;DOID:2994,4.19e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.67e-45!82;UBERON:0005743!1.15e-42!86;UBERON:0001049!9.54e-41!57;UBERON:0005068!9.54e-41!57;UBERON:0006241!9.54e-41!57;UBERON:0007135!9.54e-41!57;UBERON:0000073!1.17e-40!94;UBERON:0001016!1.17e-40!94;UBERON:0002780!1.10e-36!41;UBERON:0001890!1.10e-36!41;UBERON:0006240!1.10e-36!41;UBERON:0003080!1.40e-35!42;UBERON:0002616!8.97e-35!59;UBERON:0000955!9.55e-35!69;UBERON:0006238!9.55e-35!69;UBERON:0001893!1.59e-34!34;UBERON:0002020!2.76e-34!34;UBERON:0003528!2.76e-34!34;UBERON:0002791!6.43e-33!33;UBERON:0002346!3.57e-32!90;UBERON:0001869!6.22e-32!32;UBERON:0001950!3.53e-29!20;UBERON:0002619!4.09e-29!22;UBERON:0003075!4.55e-27!86;UBERON:0007284!4.55e-27!86;UBERON:0000956!5.51e-25!25;UBERON:0000203!5.51e-25!25;UBERON:0007023!9.36e-25!115;UBERON:0000924!4.17e-23!173;UBERON:0006601!4.17e-23!173;UBERON:0003056!5.96e-23!61;UBERON:0004121!1.67e-19!169;UBERON:0000033!3.92e-15!123;UBERON:0000153!9.88e-15!129;UBERON:0007811!9.88e-15!129;UBERON:0001871!1.34e-11!7;UBERON:0002420!1.65e-11!9;UBERON:0007245!1.65e-11!9;UBERON:0010009!1.65e-11!9;UBERON:0010011!1.65e-11!9;UBERON:0000454!1.65e-11!9;UBERON:0000200!3.79e-11!6;UBERON:0002308!1.12e-10!9;UBERON:0000125!1.12e-10!9;UBERON:0002021!4.80e-10!5;UBERON:0002298!8.80e-09!8;UBERON:0009663!3.12e-08!7;UBERON:0000025!1.44e-07!194;UBERON:0003076!5.25e-07!15;UBERON:0003057!5.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.20e-33;20!UBERON:0002619;8.07e-30;22!UBERON:0000956;3.43e-26;25!UBERON:0000203;3.43e-26;25!UBERON:0001869;1.84e-23;32!UBERON:0001893;7.46e-21;34!UBERON:0002791;5.53e-20;32!UBERON:0002780;6.04e-18;41!UBERON:0001890;6.04e-18;41!UBERON:0002346;3.05e-17;4!UBERON:0000923;3.05e-17;4!UBERON:0010316;3.05e-17;4!UBERON:0005291;3.05e-17;4!UBERON:0001871;4.02e-17;6!UBERON:0003528;7.27e-17;34!UBERON:0002020;7.27e-17;34!UBERON:0002050;6.62e-14;5!UBERON:0005423;6.62e-14;5!UBERON:0002021;1.54e-13;5!UBERON:0000200;2.07e-11;6!UBERON:0000073;2.11e-11;53!UBERON:0002616;2.11e-11;53!UBERON:0000922;5.97e-10;49!UBERON:0000955;9.06e-09;68!UBERON:0002079;2.05e-08;1!UBERON:0007190;2.05e-08;1!UBERON:0001017;2.74e-08;75!UBERON:0001016;2.38e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,7.22e-33,20;UBERON:0002619,7.19e-30,22;UBERON:0002780,1.77e-26,41;UBERON:0001890,1.77e-26,41;UBERON:0003080,1.77e-26,41;UBERON:0006240,1.77e-26,41;UBERON:0000956,3.10e-26,25;UBERON:0000203,3.10e-26,25;UBERON:0001869,1.68e-24,32;UBERON:0001893,5.42e-23,34;UBERON:0002791,2.54e-20,32;UBERON:0000073,4.63e-20,53;UBERON:0002616,4.63e-20,53;UBERON:0003528,4.58e-19,34;UBERON:0002020,4.58e-19,34;UBERON:0001049,7.05e-19,56;UBERON:0005068,7.05e-19,56;UBERON:0006241,7.05e-19,56;UBERON:0007135,7.05e-19,56;UBERON:0002346,3.24e-18,86;UBERON:0001871,3.42e-17,6;UBERON:0003056,3.68e-17,61;UBERON:0001016,7.16e-17,89;UBERON:0001017,1.41e-16,81;UBERON:0000955,6.35e-15,68;UBERON:0006238,6.35e-15,68;UBERON:0002021,1.95e-13,5;UBERON:0004121,8.46e-13,171;UBERON:0000924,8.46e-13,171;UBERON:0006601,8.46e-13,171;UBERON:0003075,3.29e-12,82;UBERON:0007284,3.29e-12,82;UBERON:0000200,2.15e-11,6;UBERON:0010371,9.59e-11,104;UBERON:0002079,1.59e-08,1;UBERON:0007190,3.79e-08,1;UBERON:0010314,6.09e-08,132;UBERON:0007023,7.69e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.397589304964456,0.813357600086629,0.414644220061482,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,1.17217447210047,0,0.205654985406647,0,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.502548796003046,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.844016498463076,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.834912883456661,0,0,0,0,0,0,0,0,1.45802306691627,0,0,0.482385754501632,0,0,0.591095237907095,1.53569778007781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.134802265961354,0,1.1713222286267,0,0,0,0.394584402849391,0,6.1214552326098,0.063186579628488,0,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.759729551470544,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0.321506296930038,0.550157746388935,0.83088067605837,0,0,0.668245123238271,0,0.0788057072991982,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,4.02686674176478,0.625954653532499,0.573409195690071,0.110929051536852,0.124192805882767,0.415045904808692,0,0.151649117541648,0.570930667089935,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521988583930423,0,0,0,0,0.617602894321944,0,0,0.192914038270915,0.168942440653073,0,0,0,0.414775308455192,0,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0.107824811396682,1.41539347670307,0,0.848662649770126,6.58982252315217,4.58562327758308,0,0,0,0.80057074828547,0,0,0.385375350578757,1.41696576325585,0.638535436228605,1.02558182120378,3.27693205088234,0.829887029570615,0.807378228159255,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,1.01306376927592,0,1.2401207790071,0.317079050969534,3.28184885410932,0,0,1.93458368795583,0,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0.328863867814245,0,0,0,0.314231179832004,0.280272163313789,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,4.57586782871147,0.118920090777569,0,0.549702583727146,0,0.154348316215889,0.655678681511872,0,0,0.235676547101626,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0,1.49581278420012,1.30905207102113,0.5290268405154,0,0,0,0,0.327796715891087,0,0.101988829741982,0.26721740526556,0,1.0028301571695,0,0.267964130156178,1.65833887891756,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p9@LINGO1 | |||
}} |
Latest revision as of 05:35, 19 September 2015
Short description: | p9@LINGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LINGO1_5end |
Coexpression cluster: | C837_neuroectodermal_duodenum_temporal_occipital_medial_carcinoid_parietal |
Association with transcript: | 104bp_to_AK027500_5end |
EntrezGene: | LINGO1 |
HGNC: | 21205 |
UniProt: | Q96FE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.63e-12 | 10 |
germ cell and embryonal cancer | 4.19e-08 | 22 |
germ cell cancer | 4.19e-08 | 22 |