FFCP PHASE1:Hg19::chr15:74220039..74220089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:74220039..74220089,+ | |||
|coexpression_cluster_id=C3512 | |||
|description=CAGE_peak_at_chr15:74220039..74220089,+ | |||
|id=chr15:74220039..74220089,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.08e-43!180;CL:0000680!6.18e-24!57;CL:0000056!6.18e-24!57;CL:0000355!6.18e-24!57;CL:0000183!1.92e-23!59;CL:0000187!3.88e-22!54;CL:0000393!1.20e-20!60;CL:0000211!1.20e-20!60;CL:0000057!2.49e-19!75;CL:0000192!9.03e-18!42;CL:0000514!9.03e-18!42;CL:0000359!3.00e-16!32;CL:0000222!9.16e-11!119;CL:0000144!8.39e-10!625;CL:0000723!1.87e-09!436;CL:0000048!2.43e-09!430;CL:0002494!5.22e-09!16;CL:0000034!5.83e-09!444;CL:0002371!7.46e-09!591;CL:0000548!6.00e-08!679;CL:0000004!6.00e-08!679;CL:0000255!6.00e-08!679;CL:0000012!1.34e-07!682;CL:0002334!2.02e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.64e-22;32!CL:0000192;1.00e-13;43!CL:0000393;1.60e-10;61!CL:0000211;1.60e-10;61!CL:0000187;3.16e-10;55!CL:0000153;3.95e-10;9!CL:0000447;3.95e-10;9!CL:0000499;5.35e-09;28!CL:0002539;4.11e-08;10!CL:0000138;4.88e-08;6!CL:0002334;1.24e-07;12!CL:0000327;3.46e-07;15!CL:0000135;4.28e-07;3!CL:0000388;4.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.37e-23,32;CL:0000680,5.66e-22,58;CL:0000056,5.66e-22,58;CL:0000355,5.66e-22,58;CL:0000187,2.89e-20,55;CL:0000192,7.54e-19,43;CL:0000514,7.54e-19,43;CL:0000393,2.09e-17,61;CL:0000211,2.09e-17,61;CL:0000723,5.15e-12,433;CL:0000048,6.19e-12,427;CL:0000034,2.18e-11,441;CL:0000153,3.13e-10,9;CL:0000447,3.13e-10,9;CL:0000499,4.92e-09,28;CL:0000222,7.38e-09,121;CL:0002539,3.39e-08,10;CL:0000058,4.02e-08,6;CL:0000138,4.02e-08,6;CL:0000057,9.93e-08,76;CL:0002334,1.90e-07,12;CL:0000327,2.61e-07,15;CL:0000135,4.64e-07,3;CL:0000388,4.64e-07,3;CL:0002559,9.06e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;1.00e-13;43!CL:0000355;1.91e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.92e-07,3;DOID:127,8.92e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004290!8.67e-23!70;UBERON:0000914!1.19e-22!83;UBERON:0002329!1.19e-22!83;UBERON:0003077!1.19e-22!83;UBERON:0003059!1.19e-22!83;UBERON:0007282!1.19e-22!83;UBERON:0009618!1.19e-22!83;UBERON:0007285!1.19e-22!83;UBERON:0002385!3.08e-21!63;UBERON:0001015!3.08e-21!63;UBERON:0000383!3.08e-21!63;UBERON:0001134!5.91e-21!61;UBERON:0002036!5.91e-21!61;UBERON:0003082!5.91e-21!61;UBERON:0000486!5.30e-19!82;UBERON:0005256!2.65e-14!143;UBERON:0001637!1.35e-12!42;UBERON:0003509!1.35e-12!42;UBERON:0004572!1.35e-12!42;UBERON:0004573!1.84e-11!33;UBERON:0004571!1.84e-11!33;UBERON:0002100!4.53e-11!216;UBERON:0004872!9.53e-10!84;UBERON:0000475!1.46e-09!365;UBERON:0001009!5.16e-08!113;UBERON:0002049!7.13e-08!79;UBERON:0007798!7.13e-08!79;UBERON:0004535!8.33e-08!110;UBERON:0007100!4.92e-07!27;UBERON:0000948!5.33e-07!24;UBERON:0005498!5.33e-07!24;UBERON:0004140!5.33e-07!24;UBERON:0009881!5.33e-07!24;UBERON:0004141!5.33e-07!24;UBERON:0003084!5.33e-07!24;UBERON:0007005!5.33e-07!24;UBERON:0004139!5.33e-07!24;UBERON:0004291!5.33e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.14e-14;33!UBERON:0004571;2.14e-14;33!UBERON:0001637;2.51e-11;42!UBERON:0003509;2.51e-11;42!UBERON:0004572;2.51e-11;42!UBERON:0004457;5.69e-09;9!UBERON:0000042;5.69e-09;9!UBERON:0004237;4.11e-08;10!UBERON:0004695;4.11e-08;10!UBERON:0002111;4.11e-08;10!UBERON:0004178;4.11e-08;10!UBERON:0007846;4.28e-07;3!UBERON:0000043;4.28e-07;3!UBERON:0007845;4.28e-07;3!UBERON:0003688;8.12e-07;6!UBERON:0002358;8.12e-07;6!UBERON:0003684;8.12e-07;6!UBERON:0001178;8.12e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.39e-20,73;UBERON:0001134,6.08e-20,62;UBERON:0002036,6.08e-20,62;UBERON:0003082,6.08e-20,62;UBERON:0002329,2.94e-19,71;UBERON:0003059,2.94e-19,71;UBERON:0007282,2.94e-19,71;UBERON:0004290,2.94e-19,71;UBERON:0009618,2.94e-19,71;UBERON:0002385,5.03e-19,64;UBERON:0001015,5.03e-19,64;UBERON:0000383,5.03e-19,64;UBERON:0003077,7.50e-19,72;UBERON:0007285,7.50e-19,72;UBERON:0001637,2.40e-18,42;UBERON:0003509,2.40e-18,42;UBERON:0004572,2.40e-18,42;UBERON:0000486,9.45e-18,83;UBERON:0004573,6.49e-17,33;UBERON:0004571,6.49e-17,33;UBERON:0007503,1.21e-16,78;UBERON:0004872,4.25e-13,83;UBERON:0007500,4.38e-11,59;UBERON:0001981,4.38e-11,59;UBERON:0004537,4.38e-11,59;UBERON:0006965,4.38e-11,59;UBERON:0005256,2.17e-10,122;UBERON:0003104,2.32e-10,160;UBERON:0009142,2.32e-10,160;UBERON:0000055,8.86e-09,68;UBERON:0002049,1.94e-08,78;UBERON:0007798,1.94e-08,78;UBERON:0002204,2.01e-08,167;UBERON:0004237,3.39e-08,10;UBERON:0004695,3.39e-08,10;UBERON:0002111,3.39e-08,10;UBERON:0004178,3.39e-08,10;UBERON:0004535,5.96e-08,109;UBERON:0001009,1.57e-07,112;UBERON:0000926,1.62e-07,315;UBERON:0004120,1.62e-07,315;UBERON:0006603,1.62e-07,315;UBERON:0007846,4.64e-07,3;UBERON:0000043,4.64e-07,3;UBERON:0007845,4.64e-07,3;UBERON:0003914,5.80e-07,117;UBERON:0000490,6.09e-07,148;UBERON:0002073,9.06e-07,5;UBERON:0005086,9.06e-07,5 | |||
|phase1_expression=1.09007027562334,0.856402095563933,2.25527046553554,0,1.34088328328186,4.36169262050184,2.53299878168311,3.79031924056099,1.82829939739887,0,0,0,0.263766978228454,0.37129905888014,2.31978163009541,0,1.20538905604795,0.730310090387373,2.43966399395253,0.123121058076788,2.24400760368678,1.56727360739044,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.511450247374121,2.53007406669196,9.5254203020819,2.462390822334,3.1811437882044,1.45990461090791,0.0945348171640679,0.665188192387692,0.527008714158756,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0.886413581652058,0.132409180813219,5.73673241497627,3.19201543978521,2.80338800071154,2.1349799145941,1.48000529050296,0.622422070799533,0.67355336034844,0.326923806226917,0.605429710579726,1.72852777344,0.468642863667593,0.624320153660641,0,0.896692083310806,0.23486899728753,0.485618833104395,0.280901613404497,0.61246251376468,0.737005903870608,0.206651562351531,1.18800285728205,0.989067717114227,0.910161361938026,0.718618141816238,0,0.625592599359821,0,0.438977620880838,3.0648779579902,0.751190294532984,0.340296549480063,0.179389635688862,0.427114777637135,1.27159140695737,0.300091096084402,0.309157587715317,0,1.30281799432113,0.506328996723799,1.85130309806277,0,0.552299391853796,1.93975268182574,0.355009592516614,1.0075209822764,0.847802961552438,0,0,0,0.121973706129595,0,0,0.310983165046111,0,0,0,6.43240938192885,4.14404764057442,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,2.94017422771084,0,0,0,0,0.122988438543114,0.514703430895577,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0.43596006883328,0,1.03417372606222,0,0.845302752556,1.06375246633948,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,1.19812427745791,1.14861935834114,0,1.59259437334337,2.26023954805422,0.716243852959582,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.613457458595699,1.00034104211935,1.08506009479894,1.45579603071565,4.28229573113188,2.68094105557689,2.22568688486155,14.4454127869305,20.4666753650386,3.10419213877515,0,2.02806085395873,0.955719759148911,2.93701736194111,3.43143423810856,0,0,0,0,1.66435439510497,0,0.992431231275107,0.153461973288062,0.280660094433074,1.40953064181271,1.02341449813341,1.28683136914886,1.48418066444991,0.771048469013278,3.72879623157567,1.31403449622095,1.03850885836724,1.16210378459959,0,0.200506470303285,0,0.114814448164607,2.00300284807389,2.36023946926963,0,0.15403067420883,0,1.46139224653261,0.633309773357254,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.984043937099117,0.976135183992909,0,0.183138929636687,0,0,0,1.6068392984416,2.61010939388729,1.07834031980251,0.307007349452259,0.551346289938122,0.322260734604821,0.870100163485371,0.596586391912706,1.15741646340759,0.165284915360978,0,0,0,2.32422774648643,2.83331112147576,1.3940745403212,0.616067160352178,2.66153015158511,2.60979897622522,2.7798632865588,1.00187420719394,0.372158369359667,1.2655176988749,0.38126038784765,0.767693373934002,0.855877976067841,1.59101623962968,2.35484592059769,0,0.274537029736055,0.353437207037059,2.02182481573316,1.58510321173008,1.26377536871694,0,0.731140468893853,2.11300293513511,0.682499557039929,0.848432591722276,4.52032466480971,1.65409603063837,1.99031692572366,5.69986150829892,1.15755106853338,1.9676842561399,1.42037263873893,0.6196469961995,1.40847801266121,0,0,1.426684205925,0.354761064070598,4.43326034125095,4.93942339439853,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0,0,0.31900115973192,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0.124252535565433,0.235694034616795,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0,0,0.859530882839914,0,0,0,0,0.399358000997982,0.429226048136571,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0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| |||
|short_description=p@chr15:74220039..74220089,+ | |||
}} |
Latest revision as of 04:06, 25 July 2015
Short description: | p@chr15:74220039..74220089, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:74220039..74220089, + |
Coexpression cluster: | C3512_Osteoblast_Hair_tenocyte_Smooth_leiomyoma_Olfactory_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.37e-23 | 32 |
muscle precursor cell | 5.66e-22 | 58 |
myoblast | 5.66e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.66e-22 | 58 |
muscle cell | 2.89e-20 | 55 |
smooth muscle cell | 7.54e-19 | 43 |
smooth muscle myoblast | 7.54e-19 | 43 |
electrically responsive cell | 2.09e-17 | 61 |
electrically active cell | 2.09e-17 | 61 |
somatic stem cell | 5.15e-12 | 433 |
multi fate stem cell | 6.19e-12 | 427 |
stem cell | 2.18e-11 | 441 |
GAG secreting cell | 3.13e-10 | 9 |
carbohydrate secreting cell | 3.13e-10 | 9 |
stromal cell | 4.92e-09 | 28 |
mesodermal cell | 7.38e-09 | 121 |
aortic smooth muscle cell | 3.39e-08 | 10 |
chondroblast | 4.02e-08 | 6 |
chondrocyte | 4.02e-08 | 6 |
fibroblast | 9.93e-08 | 76 |
preadipocyte | 1.90e-07 | 12 |
extracellular matrix secreting cell | 2.61e-07 | 15 |
fibrocyte | 4.64e-07 | 3 |
tendon cell | 4.64e-07 | 3 |
hair follicle cell | 9.06e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.92e-07 | 3 |
leiomyoma | 8.92e-07 | 3 |