FFCP PHASE1:Hg19::chr15:72502729..72502785,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:72502729..72502785,- | |||
|coexpression_cluster_id=C1409 | |||
|description=CAGE_peak_at_chr15:72502729..72502785,- | |||
|id=chr15:72502729..72502785,- | |||
|ontology_enrichment_celltype=CL:0000548!6.33e-20!679;CL:0000004!6.33e-20!679;CL:0000255!6.33e-20!679;CL:0000012!8.49e-19!682;CL:0000220!7.90e-16!246;CL:0002321!1.83e-15!248;CL:0000055!3.61e-15!180;CL:0000144!1.50e-14!625;CL:0002371!5.14e-14!591;CL:0000680!4.45e-11!57;CL:0000056!4.45e-11!57;CL:0000355!4.45e-11!57;CL:0000003!6.36e-11!722;CL:0000192!1.37e-10!42;CL:0000514!1.37e-10!42;CL:0000222!1.86e-10!119;CL:0000393!7.20e-10!60;CL:0000211!7.20e-10!60;CL:0000187!7.28e-10!54;CL:0000183!7.56e-10!59;CL:0000359!1.83e-09!32;CL:0000063!8.47e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.46e-10;32!CL:0000192;1.27e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.96e-15,250;CL:0000680,6.74e-11,58;CL:0000056,6.74e-11,58;CL:0000355,6.74e-11,58;CL:0000222,1.27e-10,121;CL:0000192,1.72e-10,43;CL:0000514,1.72e-10,43;CL:0000359,6.26e-10,32;CL:0000393,1.05e-09,61;CL:0000211,1.05e-09,61;CL:0000187,1.24e-09,55 | |||
|ontology_enrichment_development_v019=CL:0000514;1.27e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.09e-13!83;UBERON:0002329!2.09e-13!83;UBERON:0003077!2.09e-13!83;UBERON:0003059!2.09e-13!83;UBERON:0007282!2.09e-13!83;UBERON:0009618!2.09e-13!83;UBERON:0007285!2.09e-13!83;UBERON:0000486!1.38e-12!82;UBERON:0004290!1.96e-12!70;UBERON:0001134!3.21e-11!61;UBERON:0002036!3.21e-11!61;UBERON:0003082!3.21e-11!61;UBERON:0002385!1.60e-10!63;UBERON:0001015!1.60e-10!63;UBERON:0000383!1.60e-10!63;UBERON:0001637!2.14e-08!42;UBERON:0003509!2.14e-08!42;UBERON:0004572!2.14e-08!42;UBERON:0002204!1.49e-07!167;UBERON:0002049!9.00e-07!79;UBERON:0007798!9.00e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.14e-12,78;UBERON:0007524,1.33e-12,73;UBERON:0000486,2.13e-12,83;UBERON:0002329,2.42e-12,71;UBERON:0003059,2.42e-12,71;UBERON:0007282,2.42e-12,71;UBERON:0004290,2.42e-12,71;UBERON:0009618,2.42e-12,71;UBERON:0003077,3.11e-12,72;UBERON:0007285,3.11e-12,72;UBERON:0001134,8.05e-11,62;UBERON:0002036,8.05e-11,62;UBERON:0003082,8.05e-11,62;UBERON:0002385,8.02e-10,64;UBERON:0001015,8.02e-10,64;UBERON:0000383,8.02e-10,64;UBERON:0001637,2.22e-09,42;UBERON:0003509,2.22e-09,42;UBERON:0004572,2.22e-09,42;UBERON:0002204,2.08e-07,167;UBERON:0002049,2.70e-07,78;UBERON:0007798,2.70e-07,78;UBERON:0004573,4.68e-07,33;UBERON:0004571,4.68e-07,33;UBERON:0007500,7.68e-07,59;UBERON:0001981,7.68e-07,59;UBERON:0004537,7.68e-07,59;UBERON:0006965,7.68e-07,59;UBERON:0000055,9.15e-07,68 | |||
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| |||
|short_description=p@chr15:72502729..72502785,- | |||
}} |
Latest revision as of 03:58, 25 July 2015
Short description: | p@chr15:72502729..72502785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:72502729..72502785, - |
Coexpression cluster: | C1409_Smooth_Bronchial_Hair_Fibroblast_Alveolar_Mammary_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.96e-15 | 250 |
muscle precursor cell | 6.74e-11 | 58 |
myoblast | 6.74e-11 | 58 |
multi-potent skeletal muscle stem cell | 6.74e-11 | 58 |
mesodermal cell | 1.27e-10 | 121 |
smooth muscle cell | 1.72e-10 | 43 |
smooth muscle myoblast | 1.72e-10 | 43 |
vascular associated smooth muscle cell | 6.26e-10 | 32 |
electrically responsive cell | 1.05e-09 | 61 |
electrically active cell | 1.05e-09 | 61 |
muscle cell | 1.24e-09 | 55 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.14e-12 | 78 |
dense mesenchyme tissue | 1.33e-12 | 73 |
multilaminar epithelium | 2.13e-12 | 83 |
somite | 2.42e-12 | 71 |
presomitic mesoderm | 2.42e-12 | 71 |
presumptive segmental plate | 2.42e-12 | 71 |
dermomyotome | 2.42e-12 | 71 |
trunk paraxial mesoderm | 2.42e-12 | 71 |
paraxial mesoderm | 3.11e-12 | 72 |
presumptive paraxial mesoderm | 3.11e-12 | 72 |
skeletal muscle tissue | 8.05e-11 | 62 |
striated muscle tissue | 8.05e-11 | 62 |
myotome | 8.05e-11 | 62 |
muscle tissue | 8.02e-10 | 64 |
musculature | 8.02e-10 | 64 |
musculature of body | 8.02e-10 | 64 |
artery | 2.22e-09 | 42 |
arterial blood vessel | 2.22e-09 | 42 |
arterial system | 2.22e-09 | 42 |
musculoskeletal system | 2.08e-07 | 167 |
vasculature | 2.70e-07 | 78 |
vascular system | 2.70e-07 | 78 |
systemic artery | 4.68e-07 | 33 |
systemic arterial system | 4.68e-07 | 33 |
epithelial tube open at both ends | 7.68e-07 | 59 |
blood vessel | 7.68e-07 | 59 |
blood vasculature | 7.68e-07 | 59 |
vascular cord | 7.68e-07 | 59 |
vessel | 9.15e-07 | 68 |