FFCP PHASE1:Hg19::chr15:72494873..72494934,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5315 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9021 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=70bp_to_uc002atr.1_5end | |||
|cluster_id=chr15:72494873..72494934,- | |||
|description=CAGE_peak_5_at_PKM2_5end | |||
|id=chr15:72494873..72494934,- | |||
|ontology_enrichment_celltype=CL:0000548!7.64e-26!679;CL:0000004!7.64e-26!679;CL:0000255!7.64e-26!679;CL:0000012!2.15e-24!682;CL:0000144!4.70e-17!625;CL:0000220!6.99e-17!246;CL:0002321!7.23e-17!248;CL:0002371!1.94e-14!591;CL:0000003!2.53e-14!722;CL:0000055!1.00e-13!180;CL:0000066!3.59e-12!254;CL:0000063!9.25e-11!578;CL:0000222!1.70e-10!119;CL:0000680!9.73e-08!57;CL:0000056!9.73e-08!57;CL:0000355!9.73e-08!57;CL:0000192!2.04e-07!42;CL:0000514!2.04e-07!42;CL:0000183!2.94e-07!59;CL:0000187!4.62e-07!54;CL:0000359!4.73e-07!32;CL:0000393!6.30e-07!60;CL:0000211!6.30e-07!60 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.66e-16,250;CL:0000066,2.44e-11,253;CL:0000222,4.43e-10,121;CL:0000680,3.64e-07,58;CL:0000056,3.64e-07,58;CL:0000355,3.64e-07,58;CL:0000192,6.88e-07,43;CL:0000514,6.88e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!2.58e-09!42;UBERON:0003509!2.58e-09!42;UBERON:0004572!2.58e-09!42;UBERON:0000926!4.25e-09!448;UBERON:0004120!4.25e-09!448;UBERON:0006603!4.25e-09!448;UBERON:0000486!2.94e-08!82;UBERON:0000914!1.70e-07!83;UBERON:0002329!1.70e-07!83;UBERON:0003077!1.70e-07!83;UBERON:0003059!1.70e-07!83;UBERON:0007282!1.70e-07!83;UBERON:0009618!1.70e-07!83;UBERON:0007285!1.70e-07!83;UBERON:0004573!3.23e-07!33;UBERON:0004571!3.23e-07!33;UBERON:0001981!3.47e-07!60;UBERON:0007500!3.47e-07!60;UBERON:0004537!3.47e-07!60;UBERON:0006965!3.47e-07!60;UBERON:0004290!3.95e-07!70;UBERON:0002100!5.44e-07!216;UBERON:0004872!9.63e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.81e-07;42!UBERON:0003509;8.81e-07;42!UBERON:0004572;8.81e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,3.10e-09,42;UBERON:0003509,3.10e-09,42;UBERON:0004572,3.10e-09,42;UBERON:0000486,5.73e-08,83;UBERON:0007503,9.49e-08,78;UBERON:0004573,4.54e-07,33;UBERON:0004571,4.54e-07,33;UBERON:0002329,8.74e-07,71;UBERON:0003059,8.74e-07,71;UBERON:0007282,8.74e-07,71;UBERON:0004290,8.74e-07,71;UBERON:0009618,8.74e-07,71 | |||
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| |||
|short_description=p5@PKM2 | |||
}} |
Latest revision as of 22:20, 18 September 2015
Short description: | p5@PKM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PKM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 70bp_to_uc002atr.1_5end |
EntrezGene: | PKM2 |
HGNC: | 9021 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.66e-16 | 250 |
epithelial cell | 2.44e-11 | 253 |
mesodermal cell | 4.43e-10 | 121 |
muscle precursor cell | 3.64e-07 | 58 |
myoblast | 3.64e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.64e-07 | 58 |
smooth muscle cell | 6.88e-07 | 43 |
smooth muscle myoblast | 6.88e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
artery | 3.10e-09 | 42 |
arterial blood vessel | 3.10e-09 | 42 |
arterial system | 3.10e-09 | 42 |
multilaminar epithelium | 5.73e-08 | 83 |
epithelial vesicle | 9.49e-08 | 78 |
systemic artery | 4.54e-07 | 33 |
systemic arterial system | 4.54e-07 | 33 |
somite | 8.74e-07 | 71 |
presomitic mesoderm | 8.74e-07 | 71 |
presumptive segmental plate | 8.74e-07 | 71 |
dermomyotome | 8.74e-07 | 71 |
trunk paraxial mesoderm | 8.74e-07 | 71 |